RNA–Protein interactions for RNA: ENST00000400050.7

MTCL1-203, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene MTCL1, Length 6,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-203ENST00000400050 NISCHQ9Y2I1 1504 aa26.87■■□□□ 1.89
MTCL1-203ENST00000400050 DCAF8L2P0C7V8 631 aa26.83■■□□□ 1.89
MTCL1-203ENST00000400050 SUPT5HO00267 1087 aaKnown RBP25.84■■□□□ 1.73
MTCL1-203ENST00000400050 SHROOM4Q9ULL8 1493 aa25.4■■□□□ 1.66
MTCL1-203ENST00000400050 PELP1Q8IZL8 1130 aaKnown RBP24.61■■□□□ 1.53
MTCL1-203ENST00000400050 APLP2Q06481 763 aa24.58■■□□□ 1.53
MTCL1-203ENST00000400050 EHMT2Q96KQ7 1210 aa24.55■■□□□ 1.52
MTCL1-203ENST00000400050 ZEB1P37275 1124 aaPredicted RBP24.26■■□□□ 1.47
MTCL1-203ENST00000400050 PCGF6Q9BYE7 350 aa24.26■■□□□ 1.47
MTCL1-203ENST00000400050 FAM9AQ8IZU1 332 aaPredicted RBP24.24■■□□□ 1.47
MTCL1-203ENST00000400050 TRIM41Q8WV44 630 aa24.13■■□□□ 1.45
MTCL1-203ENST00000400050 CENPBP07199 599 aaPredicted RBP23.92■■□□□ 1.42
MTCL1-203ENST00000400050 CCER1Q8TC90 406 aaPredicted RBP23.82■■□□□ 1.4
MTCL1-203ENST00000400050 TTBK1Q5TCY1 1321 aaPredicted RBP23.8■■□□□ 1.4
MTCL1-203ENST00000400050 UBTFP17480 764 aaKnown RBP23.69■■□□□ 1.38
MTCL1-203ENST00000400050 RANGAP1P46060 587 aaPredicted RBP23.55■■□□□ 1.36
MTCL1-203ENST00000400050 TRIM26Q12899 539 aaPredicted RBP23.55■■□□□ 1.36
MTCL1-203ENST00000400050 ATP1B4Q9UN42 357 aaPredicted RBP23.41■■□□□ 1.34
MTCL1-203ENST00000400050 CHIC1Q5VXU3 224 aa23.36■■□□□ 1.33
MTCL1-203ENST00000400050 HRCP23327 699 aa23.35■■□□□ 1.33
MTCL1-203ENST00000400050 ERICH6Q7L0X2 663 aa23.33■■□□□ 1.33
MTCL1-203ENST00000400050 NEFLP07196 543 aa23.26■■□□□ 1.31
MTCL1-203ENST00000400050 MYT1Q01538 1121 aa23.21■■□□□ 1.31
MTCL1-203ENST00000400050 PPARGC1BQ86YN6 1023 aaKnown RBP23.08■■□□□ 1.29
MTCL1-203ENST00000400050 YTHDC1Q96MU7 727 aaKnown RBP23.06■■□□□ 1.28
MTCL1-203ENST00000400050 LOC105371045A0A1W2PR82 267 aa23.05■■□□□ 1.28
MTCL1-203ENST00000400050 HNRNPUL2Q1KMD3 747 aaKnown RBP22.77■■□□□ 1.23
MTCL1-203ENST00000400050 ITGAEP38570 1179 aa22.74■■□□□ 1.23
MTCL1-203ENST00000400050 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.62■■□□□ 1.21
MTCL1-203ENST00000400050 DIEXFQ68CQ4 756 aaKnown RBP22.57■■□□□ 1.2
MTCL1-203ENST00000400050 ABCC9O60706 1549 aa22.57■■□□□ 1.2
MTCL1-203ENST00000400050 POLR3GLQ9BT43 218 aa22.42■■□□□ 1.18
MTCL1-203ENST00000400050 DAXXQ9UER7 740 aaPredicted RBP22.42■■□□□ 1.18
MTCL1-203ENST00000400050 MYT1LQ9UL68 1186 aa22.39■■□□□ 1.17
MTCL1-203ENST00000400050 PABPN1Q86U42 306 aaKnown RBP eCLIP22.34■■□□□ 1.17
MTCL1-203ENST00000400050 FAM50AQ14320 339 aaKnown RBP22.34■■□□□ 1.17
MTCL1-203ENST00000400050 ZCCHC6Q5VYS8 1495 aaKnown RBP22.34■■□□□ 1.17
MTCL1-203ENST00000400050 CSRNP3Q8WYN3 585 aa22.21■■□□□ 1.15
MTCL1-203ENST00000400050 TRIM52Q96A61 297 aa22.18■■□□□ 1.14
MTCL1-203ENST00000400050 ZNF316A6NFI3 1004 aaPredicted RBP22.18■■□□□ 1.14
MTCL1-203ENST00000400050 DCAF1Q9Y4B6 1507 aa22.15■■□□□ 1.14
MTCL1-203ENST00000400050 CCDC180Q9P1Z9 1646 aa22.12■■□□□ 1.13
MTCL1-203ENST00000400050 ANP32CO43423 234 aa22.1■■□□□ 1.13
MTCL1-203ENST00000400050 NEUROD1Q13562 356 aa22.1■■□□□ 1.13
MTCL1-203ENST00000400050 CNGB1Q14028 1251 aaPredicted RBP22.04■■□□□ 1.12
MTCL1-203ENST00000400050 GTF3C3Q9Y5Q9 886 aa22.02■■□□□ 1.12
MTCL1-203ENST00000400050 RTL5Q5HYW3 569 aaPredicted RBP22■■□□□ 1.11
MTCL1-203ENST00000400050 SCRIBQ14160 1630 aa21.98■■□□□ 1.11
MTCL1-203ENST00000400050 SLC4A1APQ9BWU0 796 aaKnown RBP21.92■■□□□ 1.1
MTCL1-203ENST00000400050 ACIN1Q9UKV3 1341 aaKnown RBP21.9■■□□□ 1.1
MTCL1-203ENST00000400050 CLSPNQ9HAW4 1339 aa21.89■■□□□ 1.1
MTCL1-203ENST00000400050 CDK11AQ9UQ88 783 aaPredicted RBP21.85■■□□□ 1.09
MTCL1-203ENST00000400050 ZNF326Q5BKZ1 582 aaKnown RBP21.78■■□□□ 1.08
MTCL1-203ENST00000400050 BCANQ96GW7 911 aa21.74■■□□□ 1.07
MTCL1-203ENST00000400050 P3H3Q8IVL6 736 aa21.72■■□□□ 1.07
MTCL1-203ENST00000400050 FBLN2P98095 1184 aa21.69■■□□□ 1.06
MTCL1-203ENST00000400050 EEA1Q15075 1411 aa21.65■■□□□ 1.06
MTCL1-203ENST00000400050 TONSLQ96HA7 1378 aa21.64■■□□□ 1.06
MTCL1-203ENST00000400050 ZBTB47Q9UFB7 747 aaPredicted RBP21.55■■□□□ 1.04
MTCL1-203ENST00000400050 RB1CC1Q8TDY2 1594 aa21.53■■□□□ 1.04
MTCL1-203ENST00000400050 RSF1Q96T23 1441 aaPredicted RBP21.53■■□□□ 1.04
MTCL1-203ENST00000400050 CLIP1P30622 1438 aa21.5■■□□□ 1.03
MTCL1-203ENST00000400050 ZNF777Q9ULD5 760 aaPredicted RBP21.5■■□□□ 1.03
MTCL1-203ENST00000400050 CANXP27824 592 aaKnown RBP21.5■■□□□ 1.03
MTCL1-203ENST00000400050 NEFMP07197 916 aa21.49■■□□□ 1.03
MTCL1-203ENST00000400050 ANP32AP39687 249 aaKnown RBP21.47■■□□□ 1.03
MTCL1-203ENST00000400050 ARID3CA6NKF2 412 aa21.46■■□□□ 1.03
MTCL1-203ENST00000400050 GOLGA3Q08378 1498 aa21.46■■□□□ 1.03
MTCL1-203ENST00000400050 NACADO15069 1562 aa21.45■■□□□ 1.02
MTCL1-203ENST00000400050 MYO15BQ96JP2 1530 aa21.39■■□□□ 1.01
MTCL1-203ENST00000400050 FKBP8Q14318 412 aa21.37■■□□□ 1.01
MTCL1-203ENST00000400050 CEP162Q5TB80 1403 aa21.36■■□□□ 1.01
MTCL1-203ENST00000400050 DDX10Q13206 875 aaKnown RBP21.36■■□□□ 1.01
MTCL1-203ENST00000400050 MTUS2Q5JR59 1369 aa21.35■■□□□ 1.01
MTCL1-203ENST00000400050 HNRNPUQ00839 825 aaKnown RBP eCLIP21.34■■□□□ 1.01
MTCL1-203ENST00000400050 TNIKQ9UKE5 1360 aa21.32■■□□□ 1
MTCL1-203ENST00000400050 WRNQ14191 1432 aaPredicted RBP eCLIP21.3■■□□□ 1
MTCL1-203ENST00000400050 CEP164Q9UPV0 1460 aa21.26■□□□□ 0.99
MTCL1-203ENST00000400050 TSPY4P0CV99 314 aa21.21■□□□□ 0.99
MTCL1-203ENST00000400050 TSPY10P0CW01 314 aa21.21■□□□□ 0.99
MTCL1-203ENST00000400050 FAM9BQ8IZU0 186 aa21.21■□□□□ 0.99
MTCL1-203ENST00000400050 CHIC2Q9UKJ5 165 aa21.2■□□□□ 0.98
MTCL1-203ENST00000400050 BAZ1BQ9UIG0 1483 aaKnown RBP21.19■□□□□ 0.98
MTCL1-203ENST00000400050 BAZ1AQ9NRL2 1556 aaPredicted RBP21.18■□□□□ 0.98
MTCL1-203ENST00000400050 TMC1Q8TDI8 760 aa21.18■□□□□ 0.98
MTCL1-203ENST00000400050 KIF27Q86VH2 1401 aa21.18■□□□□ 0.98
MTCL1-203ENST00000400050 MIER1Q8N108 512 aa21.17■□□□□ 0.98
MTCL1-203ENST00000400050 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.16■□□□□ 0.98
MTCL1-203ENST00000400050 EIF4G2P78344 907 aaKnown RBP eCLIP21.14■□□□□ 0.98
MTCL1-203ENST00000400050 MRS2Q9HD23 443 aa21.13■□□□□ 0.97
MTCL1-203ENST00000400050 NPM1P06748 294 aaKnown RBP eCLIP21.13■□□□□ 0.97
MTCL1-203ENST00000400050 UPF2Q9HAU5 1272 aaKnown RBP21.13■□□□□ 0.97
MTCL1-203ENST00000400050 NPM2Q86SE8 214 aaKnown RBP21.12■□□□□ 0.97
MTCL1-203ENST00000400050 ESF1Q9H501 851 aaKnown RBP21.1■□□□□ 0.97
MTCL1-203ENST00000400050 CCDC136Q96JN2 1154 aa21.09■□□□□ 0.97
MTCL1-203ENST00000400050 SCAF1Q9H7N4 1312 aaKnown RBP21.08■□□□□ 0.97
MTCL1-203ENST00000400050 CHGAP10645 457 aaKnown RBP21.07■□□□□ 0.96
MTCL1-203ENST00000400050 CHMP7Q8WUX9 453 aaPredicted RBP21.06■□□□□ 0.96
MTCL1-203ENST00000400050 WDR43Q15061 677 aaKnown RBP eCLIP21.06■□□□□ 0.96
MTCL1-203ENST00000400050 SLC24A1O60721 1099 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms