RNA–Protein interactions for RNA: ENST00000618014.1

CCNA2-202, Transcript of cyclin A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNA2, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2-202ENST00000618014 NISCHQ9Y2I1 1504 aa30.6■■■□□ 2.49
CCNA2-202ENST00000618014 HRCP23327 699 aa27.35■■□□□ 1.97
CCNA2-202ENST00000618014 SHROOM4Q9ULL8 1493 aa26.81■■□□□ 1.88
CCNA2-202ENST00000618014 SUPT5HO00267 1087 aaKnown RBP26.75■■□□□ 1.87
CCNA2-202ENST00000618014 MYO15BQ96JP2 1530 aa26.65■■□□□ 1.86
CCNA2-202ENST00000618014 PCGF6Q9BYE7 350 aa26.65■■□□□ 1.86
CCNA2-202ENST00000618014 PPARGC1BQ86YN6 1023 aaKnown RBP26.59■■□□□ 1.85
CCNA2-202ENST00000618014 PELP1Q8IZL8 1130 aaKnown RBP26.52■■□□□ 1.84
CCNA2-202ENST00000618014 CHIC1Q5VXU3 224 aa26.48■■□□□ 1.83
CCNA2-202ENST00000618014 DCAF1Q9Y4B6 1507 aa26.26■■□□□ 1.79
CCNA2-202ENST00000618014 ZCCHC6Q5VYS8 1495 aaKnown RBP26.07■■□□□ 1.76
CCNA2-202ENST00000618014 CCDC180Q9P1Z9 1646 aa26.07■■□□□ 1.76
CCNA2-202ENST00000618014 TRIM26Q12899 539 aaPredicted RBP25.93■■□□□ 1.74
CCNA2-202ENST00000618014 SCAF1Q9H7N4 1312 aaKnown RBP25.81■■□□□ 1.72
CCNA2-202ENST00000618014 ZEB1P37275 1124 aaPredicted RBP25.81■■□□□ 1.72
CCNA2-202ENST00000618014 LOC105371045A0A1W2PR82 267 aa25.75■■□□□ 1.71
CCNA2-202ENST00000618014 MYT1Q01538 1121 aa25.55■■□□□ 1.68
CCNA2-202ENST00000618014 ACIN1Q9UKV3 1341 aaKnown RBP25.24■■□□□ 1.63
CCNA2-202ENST00000618014 DCAF8L2P0C7V8 631 aa25.12■■□□□ 1.61
CCNA2-202ENST00000618014 NEUROD1Q13562 356 aa25.09■■□□□ 1.61
CCNA2-202ENST00000618014 GTF3C3Q9Y5Q9 886 aa24.96■■□□□ 1.59
CCNA2-202ENST00000618014 CENPBP07199 599 aaPredicted RBP24.93■■□□□ 1.58
CCNA2-202ENST00000618014 TRIM41Q8WV44 630 aa24.84■■□□□ 1.57
CCNA2-202ENST00000618014 ABCC9O60706 1549 aa24.8■■□□□ 1.56
CCNA2-202ENST00000618014 DIEXFQ68CQ4 756 aaKnown RBP24.76■■□□□ 1.55
CCNA2-202ENST00000618014 CCER1Q8TC90 406 aaPredicted RBP24.69■■□□□ 1.54
CCNA2-202ENST00000618014 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.68■■□□□ 1.54
CCNA2-202ENST00000618014 FAM9AQ8IZU1 332 aaPredicted RBP24.68■■□□□ 1.54
CCNA2-202ENST00000618014 RSF1Q96T23 1441 aaPredicted RBP24.6■■□□□ 1.53
CCNA2-202ENST00000618014 RB1CC1Q8TDY2 1594 aa24.5■■□□□ 1.51
CCNA2-202ENST00000618014 EHMT2Q96KQ7 1210 aa24.45■■□□□ 1.5
CCNA2-202ENST00000618014 ZNF316A6NFI3 1004 aaPredicted RBP24.32■■□□□ 1.48
CCNA2-202ENST00000618014 NACADO15069 1562 aa24.28■■□□□ 1.48
CCNA2-202ENST00000618014 YTHDC1Q96MU7 727 aaKnown RBP24.21■■□□□ 1.47
CCNA2-202ENST00000618014 WRNQ14191 1432 aaPredicted RBP eCLIP24.18■■□□□ 1.465e-9■■□□□ 11.7
CCNA2-202ENST00000618014 SCRIBQ14160 1630 aa24.14■■□□□ 1.46
CCNA2-202ENST00000618014 MIER1Q8N108 512 aa24.09■■□□□ 1.45
CCNA2-202ENST00000618014 TTBK1Q5TCY1 1321 aaPredicted RBP23.99■■□□□ 1.43
CCNA2-202ENST00000618014 CLSPNQ9HAW4 1339 aa23.95■■□□□ 1.43
CCNA2-202ENST00000618014 CEP162Q5TB80 1403 aa23.92■■□□□ 1.42
CCNA2-202ENST00000618014 EIF4G1Q04637 1599 aaKnown RBP23.89■■□□□ 1.41
CCNA2-202ENST00000618014 MROH2BQ7Z745 1585 aa23.85■■□□□ 1.41
CCNA2-202ENST00000618014 CECR2Q9BXF3 1484 aa23.83■■□□□ 1.41
CCNA2-202ENST00000618014 TNIKQ9UKE5 1360 aa23.82■■□□□ 1.4
CCNA2-202ENST00000618014 ANP32EQ9BTT0 268 aa23.8■■□□□ 1.4
CCNA2-202ENST00000618014 SUPT16HQ9Y5B9 1047 aaKnown RBP23.8■■□□□ 1.4
CCNA2-202ENST00000618014 WIZO95785 1651 aa23.8■■□□□ 1.4
CCNA2-202ENST00000618014 BAZ1AQ9NRL2 1556 aaPredicted RBP23.72■■□□□ 1.39
CCNA2-202ENST00000618014 BCL11AQ9H165 835 aa23.7■■□□□ 1.38
CCNA2-202ENST00000618014 TSHZ2Q9NRE2 1034 aa23.7■■□□□ 1.38
CCNA2-202ENST00000618014 CCDC88BA6NC98 1476 aa23.67■■□□□ 1.38
CCNA2-202ENST00000618014 UNC13AQ9UPW8 1703 aa23.61■■□□□ 1.37
CCNA2-202ENST00000618014 ABCC8Q09428 1581 aa23.61■■□□□ 1.37
CCNA2-202ENST00000618014 EEA1Q15075 1411 aa23.61■■□□□ 1.37
CCNA2-202ENST00000618014 HNRNPUL2Q1KMD3 747 aaKnown RBP23.58■■□□□ 1.37
CCNA2-202ENST00000618014 SOGA1O94964 1423 aa23.58■■□□□ 1.36
CCNA2-202ENST00000618014 UBTFP17480 764 aaKnown RBP23.52■■□□□ 1.36
CCNA2-202ENST00000618014 CSRNP3Q8WYN3 585 aa23.52■■□□□ 1.36
CCNA2-202ENST00000618014 GOLGA3Q08378 1498 aa23.5■■□□□ 1.35
CCNA2-202ENST00000618014 RUSC2Q8N2Y8 1516 aa23.41■■□□□ 1.34
CCNA2-202ENST00000618014 TOP2AP11388 1531 aaKnown RBP23.4■■□□□ 1.34
CCNA2-202ENST00000618014 BICRAQ9NZM4 1560 aa23.4■■□□□ 1.34
CCNA2-202ENST00000618014 PABPN1Q86U42 306 aaKnown RBP eCLIP23.33■■□□□ 1.33
CCNA2-202ENST00000618014 SMARCA2P51531 1590 aa23.32■■□□□ 1.32
CCNA2-202ENST00000618014 VPS8Q8N3P4 1428 aa23.3■■□□□ 1.32
CCNA2-202ENST00000618014 DHX57Q6P158 1386 aaKnown RBP23.29■■□□□ 1.32
CCNA2-202ENST00000618014 CLIP1P30622 1438 aa23.27■■□□□ 1.32
CCNA2-202ENST00000618014 CEP164Q9UPV0 1460 aa23.26■■□□□ 1.31
CCNA2-202ENST00000618014 KIF21BO75037 1637 aa23.25■■□□□ 1.31
CCNA2-202ENST00000618014 APLP2Q06481 763 aa23.22■■□□□ 1.31
CCNA2-202ENST00000618014 RBM19Q9Y4C8 960 aaKnown RBP23.14■■□□□ 1.3
CCNA2-202ENST00000618014 BCANQ96GW7 911 aa23.13■■□□□ 1.29
CCNA2-202ENST00000618014 BAZ1BQ9UIG0 1483 aaKnown RBP23.12■■□□□ 1.29
CCNA2-202ENST00000618014 FKBP8Q14318 412 aa23.12■■□□□ 1.29
CCNA2-202ENST00000618014 SMARCA4P51532 1647 aa23.12■■□□□ 1.29
CCNA2-202ENST00000618014 KCNH8Q96L42 1107 aa23.08■■□□□ 1.29
CCNA2-202ENST00000618014 NEFLP07196 543 aa22.98■■□□□ 1.27
CCNA2-202ENST00000618014 CUX2O14529 1486 aa22.97■■□□□ 1.27
CCNA2-202ENST00000618014 RAPGEF2Q9Y4G8 1499 aa22.95■■□□□ 1.26
CCNA2-202ENST00000618014 SYNJ1O43426 1573 aa22.94■■□□□ 1.26
CCNA2-202ENST00000618014 RRBP1Q9P2E9 1410 aaKnown RBP22.92■■□□□ 1.26
CCNA2-202ENST00000618014 MSH5O43196 834 aa22.91■■□□□ 1.26
CCNA2-202ENST00000618014 FANCIQ9NVI1 1328 aa22.84■■□□□ 1.25
CCNA2-202ENST00000618014 ITGAEP38570 1179 aa22.82■■□□□ 1.24
CCNA2-202ENST00000618014 KANK4Q5T7N3 995 aaPredicted RBP22.8■■□□□ 1.24
CCNA2-202ENST00000618014 RANGAP1P46060 587 aaPredicted RBP22.79■■□□□ 1.24
CCNA2-202ENST00000618014 DDX10Q13206 875 aaKnown RBP22.79■■□□□ 1.24
CCNA2-202ENST00000618014 ARAP1Q96P48 1450 aa22.78■■□□□ 1.24
CCNA2-202ENST00000618014 CCER2I3L3R5 266 aa22.78■■□□□ 1.24
CCNA2-202ENST00000618014 MAPKBP1O60336 1514 aa22.77■■□□□ 1.24
CCNA2-202ENST00000618014 PPP1R15AO75807 674 aaPredicted RBP22.75■■□□□ 1.23
CCNA2-202ENST00000618014 CCNB3Q8WWL7 1395 aa22.75■■□□□ 1.23
CCNA2-202ENST00000618014 PEG3Q9GZU2 1588 aa22.74■■□□□ 1.23
CCNA2-202ENST00000618014 MYT1LQ9UL68 1186 aa22.73■■□□□ 1.23
CCNA2-202ENST00000618014 ERICH6Q7L0X2 663 aa22.71■■□□□ 1.23
CCNA2-202ENST00000618014 TRIM52Q96A61 297 aa22.71■■□□□ 1.23
CCNA2-202ENST00000618014 ERICH3Q5RHP9 1530 aa22.71■■□□□ 1.23
CCNA2-202ENST00000618014 WDR97A6NE52 1622 aa22.69■■□□□ 1.22
CCNA2-202ENST00000618014 RAB3GAP2Q9H2M9 1393 aa22.68■■□□□ 1.22
CCNA2-202ENST00000618014 ATAD2BQ9ULI0 1458 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms