RNA–Protein interactions for RNA: ENST00000584998.5

IKBKE-204, Transcript of inhibitor of nuclear factor kappa B kinase subunit epsilon, humanhuman

TSL 1 (best) BASIC

Gene IKBKE, Length 2,487 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKE-204ENST00000584998 NISCHQ9Y2I1 1504 aa35.41■■■■□ 3.26
IKBKE-204ENST00000584998 CCDC180Q9P1Z9 1646 aa30.26■■■□□ 2.44
IKBKE-204ENST00000584998 SHROOM4Q9ULL8 1493 aa30.02■■■□□ 2.4
IKBKE-204ENST00000584998 ZCCHC6Q5VYS8 1495 aaKnown RBP29.87■■■□□ 2.37
IKBKE-204ENST00000584998 DCAF8L2P0C7V8 631 aa29.57■■■□□ 2.32
IKBKE-204ENST00000584998 SUPT5HO00267 1087 aaKnown RBP29.27■■■□□ 2.28
IKBKE-204ENST00000584998 DCAF1Q9Y4B6 1507 aa29■■■□□ 2.23
IKBKE-204ENST00000584998 ABCC9O60706 1549 aa28.4■■■□□ 2.14
IKBKE-204ENST00000584998 SCRIBQ14160 1630 aa28.37■■■□□ 2.13
IKBKE-204ENST00000584998 MYO15BQ96JP2 1530 aa28.28■■■□□ 2.12
IKBKE-204ENST00000584998 CHIC1Q5VXU3 224 aa28.24■■■□□ 2.11
IKBKE-204ENST00000584998 NACADO15069 1562 aa28.05■■■□□ 2.08
IKBKE-204ENST00000584998 RSF1Q96T23 1441 aaPredicted RBP27.89■■■□□ 2.06
IKBKE-204ENST00000584998 RB1CC1Q8TDY2 1594 aa27.69■■■□□ 2.02
IKBKE-204ENST00000584998 CECR2Q9BXF3 1484 aa27.68■■■□□ 2.02
IKBKE-204ENST00000584998 MROH2BQ7Z745 1585 aa27.54■■■□□ 2
IKBKE-204ENST00000584998 LOC105371045A0A1W2PR82 267 aa27.44■■□□□ 1.98
IKBKE-204ENST00000584998 WIZO95785 1651 aa27.4■■□□□ 1.98
IKBKE-204ENST00000584998 UNC13AQ9UPW8 1703 aa27.34■■□□□ 1.97
IKBKE-204ENST00000584998 TRIM41Q8WV44 630 aa27.26■■□□□ 1.95
IKBKE-204ENST00000584998 BAZ1AQ9NRL2 1556 aaPredicted RBP27.22■■□□□ 1.95
IKBKE-204ENST00000584998 PABPN1Q86U42 306 aaKnown RBP eCLIP27.11■■□□□ 1.93
IKBKE-204ENST00000584998 FAM9AQ8IZU1 332 aaPredicted RBP27.08■■□□□ 1.93
IKBKE-204ENST00000584998 SMARCA4P51532 1647 aa27.06■■□□□ 1.92
IKBKE-204ENST00000584998 PCGF6Q9BYE7 350 aa27.04■■□□□ 1.92
IKBKE-204ENST00000584998 BICRAQ9NZM4 1560 aa26.96■■□□□ 1.91
IKBKE-204ENST00000584998 TOP2AP11388 1531 aaKnown RBP26.91■■□□□ 1.9
IKBKE-204ENST00000584998 EHMT2Q96KQ7 1210 aa26.9■■□□□ 1.9
IKBKE-204ENST00000584998 CCDC88BA6NC98 1476 aa26.81■■□□□ 1.88
IKBKE-204ENST00000584998 EIF4G1Q04637 1599 aaKnown RBP26.8■■□□□ 1.88
IKBKE-204ENST00000584998 SMARCA2P51531 1590 aa26.77■■□□□ 1.88
IKBKE-204ENST00000584998 HRCP23327 699 aa26.73■■□□□ 1.87
IKBKE-204ENST00000584998 ABCC8Q09428 1581 aa26.66■■□□□ 1.86
IKBKE-204ENST00000584998 TRIM26Q12899 539 aaPredicted RBP26.56■■□□□ 1.84
IKBKE-204ENST00000584998 PEG3Q9GZU2 1588 aa26.51■■□□□ 1.83
IKBKE-204ENST00000584998 ATAD2BQ9ULI0 1458 aa26.44■■□□□ 1.82
IKBKE-204ENST00000584998 BAZ1BQ9UIG0 1483 aaKnown RBP26.36■■□□□ 1.81
IKBKE-204ENST00000584998 SOGA1O94964 1423 aa26.33■■□□□ 1.81
IKBKE-204ENST00000584998 PPARGC1BQ86YN6 1023 aaKnown RBP26.32■■□□□ 1.8
IKBKE-204ENST00000584998 RUSC2Q8N2Y8 1516 aa26.23■■□□□ 1.79
IKBKE-204ENST00000584998 WRNQ14191 1432 aaPredicted RBP eCLIP26.22■■□□□ 1.79
IKBKE-204ENST00000584998 CSRNP3Q8WYN3 585 aa26.13■■□□□ 1.77
IKBKE-204ENST00000584998 SYNJ1O43426 1573 aa26.12■■□□□ 1.77
IKBKE-204ENST00000584998 EEA1Q15075 1411 aa26.05■■□□□ 1.76
IKBKE-204ENST00000584998 UBTFP17480 764 aaKnown RBP26.04■■□□□ 1.76
IKBKE-204ENST00000584998 CEP162Q5TB80 1403 aa26.02■■□□□ 1.76
IKBKE-204ENST00000584998 TNIKQ9UKE5 1360 aa25.98■■□□□ 1.75
IKBKE-204ENST00000584998 NCAPD3P42695 1498 aa25.96■■□□□ 1.75
IKBKE-204ENST00000584998 HMGXB3Q12766 1538 aa25.93■■□□□ 1.74
IKBKE-204ENST00000584998 TTBK1Q5TCY1 1321 aaPredicted RBP25.93■■□□□ 1.74
IKBKE-204ENST00000584998 GOLGA3Q08378 1498 aa25.9■■□□□ 1.74
IKBKE-204ENST00000584998 TOP2BQ02880 1626 aa25.81■■□□□ 1.72
IKBKE-204ENST00000584998 CEP164Q9UPV0 1460 aa25.79■■□□□ 1.72
IKBKE-204ENST00000584998 ZEB1P37275 1124 aaPredicted RBP25.76■■□□□ 1.71
IKBKE-204ENST00000584998 KIF21BO75037 1637 aa25.75■■□□□ 1.71
IKBKE-204ENST00000584998 BIVM-ERCC5R4GMW8 1640 aa25.72■■□□□ 1.71
IKBKE-204ENST00000584998 RAPGEF2Q9Y4G8 1499 aa25.69■■□□□ 1.7
IKBKE-204ENST00000584998 RANGAP1P46060 587 aaPredicted RBP25.68■■□□□ 1.7
IKBKE-204ENST00000584998 CFTRP13569 1480 aa25.67■■□□□ 1.7
IKBKE-204ENST00000584998 CUX1P39880 1505 aa25.65■■□□□ 1.7
IKBKE-204ENST00000584998 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.64■■□□□ 1.69
IKBKE-204ENST00000584998 CLIP1P30622 1438 aa25.61■■□□□ 1.69
IKBKE-204ENST00000584998 CC2D2AQ9P2K1 1620 aa25.56■■□□□ 1.68
IKBKE-204ENST00000584998 CCER1Q8TC90 406 aaPredicted RBP25.52■■□□□ 1.68
IKBKE-204ENST00000584998 PRDM2Q13029 1718 aa25.47■■□□□ 1.67
IKBKE-204ENST00000584998 CADPSQ9ULU8 1353 aa25.46■■□□□ 1.67
IKBKE-204ENST00000584998 PRXQ9BXM0 1461 aa25.44■■□□□ 1.66
IKBKE-204ENST00000584998 VPS8Q8N3P4 1428 aa25.43■■□□□ 1.66
IKBKE-204ENST00000584998 KIF27Q86VH2 1401 aa25.43■■□□□ 1.66
IKBKE-204ENST00000584998 ERICH3Q5RHP9 1530 aa25.39■■□□□ 1.66
IKBKE-204ENST00000584998 APLP2Q06481 763 aa25.35■■□□□ 1.65
IKBKE-204ENST00000584998 CUX2O14529 1486 aa25.29■■□□□ 1.64
IKBKE-204ENST00000584998 HNRNPUL2Q1KMD3 747 aaKnown RBP25.26■■□□□ 1.63
IKBKE-204ENST00000584998 FGD5Q6ZNL6 1462 aa25.26■■□□□ 1.63
IKBKE-204ENST00000584998 ARAP1Q96P48 1450 aa25.24■■□□□ 1.63
IKBKE-204ENST00000584998 FANCD2Q9BXW9 1451 aa25.23■■□□□ 1.63
IKBKE-204ENST00000584998 NESP48681 1621 aa25.21■■□□□ 1.63
IKBKE-204ENST00000584998 IGF1RP08069 1367 aa25.2■■□□□ 1.62
IKBKE-204ENST00000584998 KANK4Q5T7N3 995 aaPredicted RBP25.1■■□□□ 1.61
IKBKE-204ENST00000584998 CARMIL1Q5VZK9 1371 aa25.09■■□□□ 1.61
IKBKE-204ENST00000584998 ARHGAP35Q9NRY4 1499 aa25.09■■□□□ 1.61
IKBKE-204ENST00000584998 RAD54L2Q9Y4B4 1467 aa25.07■■□□□ 1.6
IKBKE-204ENST00000584998 DNAJC5BQ9UF47 199 aa25.07■■□□□ 1.6
IKBKE-204ENST00000584998 DNMBPQ6XZF7 1577 aa25.04■■□□□ 1.6
IKBKE-204ENST00000584998 TOPBP1Q92547 1522 aa25.03■■□□□ 1.6
IKBKE-204ENST00000584998 POLA1P09884 1462 aaPredicted RBP25■■□□□ 1.59
IKBKE-204ENST00000584998 LAMC3Q9Y6N6 1575 aa24.92■■□□□ 1.58
IKBKE-204ENST00000584998 ABCA10Q8WWZ4 1543 aa24.92■■□□□ 1.58
IKBKE-204ENST00000584998 P3H3Q8IVL6 736 aa24.9■■□□□ 1.58
IKBKE-204ENST00000584998 URB2Q14146 1524 aaKnown RBP24.89■■□□□ 1.58
IKBKE-204ENST00000584998 DIEXFQ68CQ4 756 aaKnown RBP24.79■■□□□ 1.56
IKBKE-204ENST00000584998 TDRD9Q8NDG6 1382 aaKnown RBP24.79■■□□□ 1.56
IKBKE-204ENST00000584998 PDS5BQ9NTI5 1447 aa24.78■■□□□ 1.56
IKBKE-204ENST00000584998 ATP1B4Q9UN42 357 aaPredicted RBP24.77■■□□□ 1.56
IKBKE-204ENST00000584998 KIF21AQ7Z4S6 1674 aa24.77■■□□□ 1.56
IKBKE-204ENST00000584998 RRBP1Q9P2E9 1410 aaKnown RBP24.77■■□□□ 1.56
IKBKE-204ENST00000584998 ITGAEP38570 1179 aa24.76■■□□□ 1.55
IKBKE-204ENST00000584998 TIAM1Q13009 1591 aa24.74■■□□□ 1.55
IKBKE-204ENST00000584998 WDR97A6NE52 1622 aa24.74■■□□□ 1.55
IKBKE-204ENST00000584998 CUL7Q14999 1698 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms