RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 DCAF8L2P0C7V8 631 aa27.39■■□□□ 1.97
CACNA1A-202ENST00000573710 EHMT2Q96KQ7 1210 aa26■■□□□ 1.75
CACNA1A-202ENST00000573710 PELP1Q8IZL8 1130 aaKnown RBP25.88■■□□□ 1.73
CACNA1A-202ENST00000573710 ERICH6Q7L0X2 663 aa25.53■■□□□ 1.68
CACNA1A-202ENST00000573710 MYT1Q01538 1121 aa25.46■■□□□ 1.67
CACNA1A-202ENST00000573710 SUPT5HO00267 1087 aaKnown RBP25.24■■□□□ 1.63
CACNA1A-202ENST00000573710 TTBK1Q5TCY1 1321 aaPredicted RBP25.04■■□□□ 1.6
CACNA1A-202ENST00000573710 APLP2Q06481 763 aa24.81■■□□□ 1.56
CACNA1A-202ENST00000573710 CCER1Q8TC90 406 aaPredicted RBP24.73■■□□□ 1.55
CACNA1A-202ENST00000573710 RANGAP1P46060 587 aaPredicted RBP24.65■■□□□ 1.54
CACNA1A-202ENST00000573710 FAM9AQ8IZU1 332 aaPredicted RBP24.62■■□□□ 1.53
CACNA1A-202ENST00000573710 ATP1B4Q9UN42 357 aaPredicted RBP24.54■■□□□ 1.52
CACNA1A-202ENST00000573710 SHROOM4Q9ULL8 1493 aa24.51■■□□□ 1.51
CACNA1A-202ENST00000573710 PCGF6Q9BYE7 350 aa24.22■■□□□ 1.47
CACNA1A-202ENST00000573710 YTHDC1Q96MU7 727 aaKnown RBP24.21■■□□□ 1.47
CACNA1A-202ENST00000573710 DAXXQ9UER7 740 aaPredicted RBP24.13■■□□□ 1.45
CACNA1A-202ENST00000573710 CHIC1Q5VXU3 224 aa24.08■■□□□ 1.45
CACNA1A-202ENST00000573710 NEFLP07196 543 aa24.05■■□□□ 1.44
CACNA1A-202ENST00000573710 MYT1LQ9UL68 1186 aa23.99■■□□□ 1.43
CACNA1A-202ENST00000573710 CNGB1Q14028 1251 aaPredicted RBP23.98■■□□□ 1.43
CACNA1A-202ENST00000573710 CENPBP07199 599 aaPredicted RBP23.97■■□□□ 1.43
CACNA1A-202ENST00000573710 POLR3GLQ9BT43 218 aa23.87■■□□□ 1.41
CACNA1A-202ENST00000573710 SLC4A1APQ9BWU0 796 aaKnown RBP23.73■■□□□ 1.39
CACNA1A-202ENST00000573710 BCL11AQ9H165 835 aa23.53■■□□□ 1.36
CACNA1A-202ENST00000573710 ZNF316A6NFI3 1004 aaPredicted RBP23.47■■□□□ 1.35
CACNA1A-202ENST00000573710 CLSPNQ9HAW4 1339 aa23.43■■□□□ 1.34
CACNA1A-202ENST00000573710 PPARGC1BQ86YN6 1023 aaKnown RBP23.36■■□□□ 1.33
CACNA1A-202ENST00000573710 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.36■■□□□ 1.33
CACNA1A-202ENST00000573710 HNRNPUL2Q1KMD3 747 aaKnown RBP23.36■■□□□ 1.33
CACNA1A-202ENST00000573710 UBTFP17480 764 aaKnown RBP23.34■■□□□ 1.33
CACNA1A-202ENST00000573710 SLC24A1O60721 1099 aa23.28■■□□□ 1.32
CACNA1A-202ENST00000573710 ITGAEP38570 1179 aa23.25■■□□□ 1.31
CACNA1A-202ENST00000573710 RTL5Q5HYW3 569 aaPredicted RBP23.18■■□□□ 1.3
CACNA1A-202ENST00000573710 TRIM41Q8WV44 630 aa22.97■■□□□ 1.27
CACNA1A-202ENST00000573710 ZEB1P37275 1124 aaPredicted RBP22.91■■□□□ 1.26
CACNA1A-202ENST00000573710 NISCHQ9Y2I1 1504 aa22.91■■□□□ 1.26
CACNA1A-202ENST00000573710 ZBTB47Q9UFB7 747 aaPredicted RBP22.76■■□□□ 1.23
CACNA1A-202ENST00000573710 EIF5BO60841 1220 aaKnown RBP22.7■■□□□ 1.22
CACNA1A-202ENST00000573710 BCANQ96GW7 911 aa22.69■■□□□ 1.22
CACNA1A-202ENST00000573710 PLPPR3Q6T4P5 718 aa22.58■■□□□ 1.21
CACNA1A-202ENST00000573710 CANXP27824 592 aaKnown RBP22.42■■□□□ 1.18
CACNA1A-202ENST00000573710 TULP1O00294 542 aaPredicted RBP22.39■■□□□ 1.18
CACNA1A-202ENST00000573710 ZNF326Q5BKZ1 582 aaKnown RBP22.39■■□□□ 1.17
CACNA1A-202ENST00000573710 ARXQ96QS3 562 aa22.38■■□□□ 1.17
CACNA1A-202ENST00000573710 NCBP3Q53F19 620 aaKnown RBP22.34■■□□□ 1.17
CACNA1A-202ENST00000573710 NPM2Q86SE8 214 aaKnown RBP22.33■■□□□ 1.17
CACNA1A-202ENST00000573710 TRIM52Q96A61 297 aa22.3■■□□□ 1.16
CACNA1A-202ENST00000573710 A0A0G2JS52 829 aa22.27■■□□□ 1.16
CACNA1A-202ENST00000573710 NEUROD1Q13562 356 aa22.22■■□□□ 1.15
CACNA1A-202ENST00000573710 FAM50AQ14320 339 aaKnown RBP22.22■■□□□ 1.15
CACNA1A-202ENST00000573710 CDK11BP21127 795 aaKnown RBP22.18■■□□□ 1.14
CACNA1A-202ENST00000573710 CDK11AQ9UQ88 783 aaPredicted RBP22.18■■□□□ 1.14
CACNA1A-202ENST00000573710 HSP90AA1P07900 732 aaKnown RBP22.17■■□□□ 1.14
CACNA1A-202ENST00000573710 ANP32BQ92688 251 aaKnown RBP22.16■■□□□ 1.14
CACNA1A-202ENST00000573710 NEFMP07197 916 aa22.15■■□□□ 1.14
CACNA1A-202ENST00000573710 SCAF1Q9H7N4 1312 aaKnown RBP22.12■■□□□ 1.13
CACNA1A-202ENST00000573710 PLEKHG5O94827 1062 aa22.07■■□□□ 1.12
CACNA1A-202ENST00000573710 HRCP23327 699 aa22.01■■□□□ 1.11
CACNA1A-202ENST00000573710 FBLN2P98095 1184 aa22■■□□□ 1.11
CACNA1A-202ENST00000573710 AMER1Q5JTC6 1135 aaPredicted RBP21.92■■□□□ 1.1
CACNA1A-202ENST00000573710 TRIM26Q12899 539 aaPredicted RBP21.92■■□□□ 1.1
CACNA1A-202ENST00000573710 GLIPR1L2Q4G1C9 344 aa21.91■■□□□ 1.1
CACNA1A-202ENST00000573710 TPRNQ4KMQ1 711 aa21.88■■□□□ 1.09
CACNA1A-202ENST00000573710 ANP32AP39687 249 aaKnown RBP21.87■■□□□ 1.09
CACNA1A-202ENST00000573710 ARID3CA6NKF2 412 aa21.85■■□□□ 1.09
CACNA1A-202ENST00000573710 NBR1Q14596 966 aa21.84■■□□□ 1.09
CACNA1A-202ENST00000573710 DIEXFQ68CQ4 756 aaKnown RBP21.83■■□□□ 1.09
CACNA1A-202ENST00000573710 ESF1Q9H501 851 aaKnown RBP21.82■■□□□ 1.08
CACNA1A-202ENST00000573710 TAOK2Q9UL54 1235 aa21.8■■□□□ 1.08
CACNA1A-202ENST00000573710 ZBTB7CA1YPR0 619 aa21.78■■□□□ 1.08
CACNA1A-202ENST00000573710 STAG3Q9UJ98 1225 aa21.78■■□□□ 1.08
CACNA1A-202ENST00000573710 SENP3Q9H4L4 574 aaPredicted RBP21.78■■□□□ 1.08
CACNA1A-202ENST00000573710 ANP32CO43423 234 aa21.77■■□□□ 1.07
CACNA1A-202ENST00000573710 CHGAP10645 457 aaKnown RBP21.75■■□□□ 1.07
CACNA1A-202ENST00000573710 LOC105371045A0A1W2PR82 267 aa21.74■■□□□ 1.07
CACNA1A-202ENST00000573710 SALL2Q9Y467 1007 aaPredicted RBP21.71■■□□□ 1.07
CACNA1A-202ENST00000573710 GTF3C3Q9Y5Q9 886 aa21.7■■□□□ 1.06
CACNA1A-202ENST00000573710 ZNF777Q9ULD5 760 aaPredicted RBP21.56■■□□□ 1.04
CACNA1A-202ENST00000573710 UPF2Q9HAU5 1272 aaKnown RBP21.56■■□□□ 1.04
CACNA1A-202ENST00000573710 C14orf37Q86TY3 774 aa21.52■■□□□ 1.03
CACNA1A-202ENST00000573710 PRM3Q9NNZ6 103 aa21.49■■□□□ 1.03
CACNA1A-202ENST00000573710 CLSTN1O94985 981 aa21.49■■□□□ 1.03
CACNA1A-202ENST00000573710 DNTTIP2Q5QJE6 756 aaKnown RBP21.4■■□□□ 1.02
CACNA1A-202ENST00000573710 P3H3Q8IVL6 736 aa21.39■■□□□ 1.02
CACNA1A-202ENST00000573710 NPHP1O15259 732 aa21.37■■□□□ 1.01
CACNA1A-202ENST00000573710 HAP1P54257 671 aaPredicted RBP21.36■■□□□ 1.01
CACNA1A-202ENST00000573710 TNNT2P45379 298 aaPredicted RBP21.35■■□□□ 1.01
CACNA1A-202ENST00000573710 NCLP19338 710 aaKnown RBP21.35■■□□□ 1.01
CACNA1A-202ENST00000573710 TRIM44Q96DX7 344 aaPredicted RBP21.3■■□□□ 1
CACNA1A-202ENST00000573710 ANO8Q9HCE9 1232 aaPredicted RBP21.29■■□□□ 1
CACNA1A-202ENST00000573710 FBXO3Q9UK99 471 aa21.29■■□□□ 1
CACNA1A-202ENST00000573710 PTMAP06454 111 aaKnown RBP21.27■□□□□ 0.99
CACNA1A-202ENST00000573710 ZRSR1Q15695 479 aaKnown RBP21.26■□□□□ 0.99
CACNA1A-202ENST00000573710 FAM9BQ8IZU0 186 aa21.26■□□□□ 0.99
CACNA1A-202ENST00000573710 PLCB2Q00722 1185 aa21.25■□□□□ 0.99
CACNA1A-202ENST00000573710 FKBP8Q14318 412 aa21.25■□□□□ 0.99
CACNA1A-202ENST00000573710 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.22■□□□□ 0.99
CACNA1A-202ENST00000573710 PDE4CQ08493 712 aa21.21■□□□□ 0.99
CACNA1A-202ENST00000573710 RTN4Q9NQC3 1192 aaKnown RBP21.19■□□□□ 0.98
CACNA1A-202ENST00000573710 MYH16Q9H6N6 1097 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms