RNA–Protein interactions for RNA: ENST00000332629.6

WDR53-201, Transcript of WD repeat domain 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene WDR53, Length 1,679 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR53-201ENST00000332629 NISCHQ9Y2I1 1504 aa40.34■■■■■ 4.05
WDR53-201ENST00000332629 CCDC180Q9P1Z9 1646 aa35.73■■■■□ 3.31
WDR53-201ENST00000332629 ABCC9O60706 1549 aa34.39■■■■□ 3.1
WDR53-201ENST00000332629 ZCCHC6Q5VYS8 1495 aaKnown RBP33.76■■■■□ 3
WDR53-201ENST00000332629 DCAF8L2P0C7V8 631 aa33.39■■■□□ 2.94
WDR53-201ENST00000332629 DCAF1Q9Y4B6 1507 aa33.32■■■□□ 2.92
WDR53-201ENST00000332629 NACADO15069 1562 aa33.31■■■□□ 2.92
WDR53-201ENST00000332629 RB1CC1Q8TDY2 1594 aa33.26■■■□□ 2.92
WDR53-201ENST00000332629 MYO15BQ96JP2 1530 aa33.2■■■□□ 2.91
WDR53-201ENST00000332629 UNC13AQ9UPW8 1703 aa32.87■■■□□ 2.85
WDR53-201ENST00000332629 SCRIBQ14160 1630 aa32.72■■■□□ 2.83
WDR53-201ENST00000332629 BICRAQ9NZM4 1560 aa32.36■■■□□ 2.77
WDR53-201ENST00000332629 SHROOM4Q9ULL8 1493 aa32.3■■■□□ 2.76
WDR53-201ENST00000332629 PABPN1Q86U42 306 aaKnown RBP eCLIP32.15■■■□□ 2.74
WDR53-201ENST00000332629 CECR2Q9BXF3 1484 aa31.43■■■□□ 2.62
WDR53-201ENST00000332629 EIF4G1Q04637 1599 aaKnown RBP31.41■■■□□ 2.62
WDR53-201ENST00000332629 SMARCA4P51532 1647 aa31.29■■■□□ 2.6
WDR53-201ENST00000332629 BAZ1AQ9NRL2 1556 aaPredicted RBP31.22■■■□□ 2.59
WDR53-201ENST00000332629 CC2D2AQ9P2K1 1620 aa31.18■■■□□ 2.58
WDR53-201ENST00000332629 MROH2BQ7Z745 1585 aa31.17■■■□□ 2.58
WDR53-201ENST00000332629 DNAJC5BQ9UF47 199 aa31■■■□□ 2.55
WDR53-201ENST00000332629 WIZO95785 1651 aa30.98■■■□□ 2.55
WDR53-201ENST00000332629 RSF1Q96T23 1441 aaPredicted RBP30.91■■■□□ 2.54
WDR53-201ENST00000332629 PEG3Q9GZU2 1588 aa30.88■■■□□ 2.53
WDR53-201ENST00000332629 ATAD2BQ9ULI0 1458 aa30.85■■■□□ 2.53
WDR53-201ENST00000332629 SMARCA2P51531 1590 aa30.83■■■□□ 2.53
WDR53-201ENST00000332629 HMGXB3Q12766 1538 aa30.67■■■□□ 2.5
WDR53-201ENST00000332629 NCAPD3P42695 1498 aa30.67■■■□□ 2.5
WDR53-201ENST00000332629 BAZ1BQ9UIG0 1483 aaKnown RBP30.64■■■□□ 2.5
WDR53-201ENST00000332629 TOP2AP11388 1531 aaKnown RBP30.55■■■□□ 2.48
WDR53-201ENST00000332629 SUPT5HO00267 1087 aaKnown RBP30.55■■■□□ 2.48
WDR53-201ENST00000332629 CCDC88BA6NC98 1476 aa30.14■■■□□ 2.42
WDR53-201ENST00000332629 NESP48681 1621 aa29.98■■■□□ 2.39
WDR53-201ENST00000332629 PRDM2Q13029 1718 aa29.94■■■□□ 2.38
WDR53-201ENST00000332629 LAMC3Q9Y6N6 1575 aa29.88■■■□□ 2.37
WDR53-201ENST00000332629 CADPSQ9ULU8 1353 aa29.79■■■□□ 2.36
WDR53-201ENST00000332629 CFTRP13569 1480 aa29.79■■■□□ 2.36
WDR53-201ENST00000332629 KIF21AQ7Z4S6 1674 aa29.78■■■□□ 2.36
WDR53-201ENST00000332629 FANCD2Q9BXW9 1451 aa29.55■■■□□ 2.32
WDR53-201ENST00000332629 PDS5BQ9NTI5 1447 aa29.52■■■□□ 2.32
WDR53-201ENST00000332629 ERCC6Q03468 1493 aa29.52■■■□□ 2.32
WDR53-201ENST00000332629 CEP164Q9UPV0 1460 aa29.47■■■□□ 2.31
WDR53-201ENST00000332629 THOC2Q8NI27 1593 aaKnown RBP29.45■■■□□ 2.3
WDR53-201ENST00000332629 ABCC8Q09428 1581 aa29.37■■■□□ 2.29
WDR53-201ENST00000332629 MRC2Q9UBG0 1479 aa29.3■■■□□ 2.28
WDR53-201ENST00000332629 URB2Q14146 1524 aaKnown RBP29.29■■■□□ 2.28
WDR53-201ENST00000332629 WDR62O43379 1518 aa29.24■■■□□ 2.27
WDR53-201ENST00000332629 CUX1P39880 1505 aa29.22■■■□□ 2.27
WDR53-201ENST00000332629 SYNJ1O43426 1573 aa29.21■■■□□ 2.27
WDR53-201ENST00000332629 DNMBPQ6XZF7 1577 aa29.21■■■□□ 2.27
WDR53-201ENST00000332629 TOPBP1Q92547 1522 aa29.18■■■□□ 2.26
WDR53-201ENST00000332629 BIVM-ERCC5R4GMW8 1640 aa29.16■■■□□ 2.26
WDR53-201ENST00000332629 WRNQ14191 1432 aaPredicted RBP eCLIP29.12■■■□□ 2.25
WDR53-201ENST00000332629 TOP2BQ02880 1626 aa29.1■■■□□ 2.25
WDR53-201ENST00000332629 FGD5Q6ZNL6 1462 aa29■■■□□ 2.23
WDR53-201ENST00000332629 POLA1P09884 1462 aaPredicted RBP28.97■■■□□ 2.23
WDR53-201ENST00000332629 CUX2O14529 1486 aa28.94■■■□□ 2.22
WDR53-201ENST00000332629 WDR97A6NE52 1622 aa28.91■■■□□ 2.22
WDR53-201ENST00000332629 TARBP1Q13395 1621 aaKnown RBP28.9■■■□□ 2.22
WDR53-201ENST00000332629 RAD54L2Q9Y4B4 1467 aa28.87■■■□□ 2.21
WDR53-201ENST00000332629 CHIC1Q5VXU3 224 aa28.8■■■□□ 2.2
WDR53-201ENST00000332629 IFT140Q96RY7 1462 aa28.76■■■□□ 2.19
WDR53-201ENST00000332629 SOGA1O94964 1423 aa28.75■■■□□ 2.19
WDR53-201ENST00000332629 TRIM41Q8WV44 630 aa28.73■■■□□ 2.19
WDR53-201ENST00000332629 ZNF608Q9ULD9 1512 aaPredicted RBP28.73■■■□□ 2.19
WDR53-201ENST00000332629 EIF4G3O43432 1585 aaKnown RBP28.72■■■□□ 2.19
WDR53-201ENST00000332629 ABCA10Q8WWZ4 1543 aa28.68■■■□□ 2.18
WDR53-201ENST00000332629 ABCA5Q8WWZ7 1642 aa28.66■■■□□ 2.18
WDR53-201ENST00000332629 PBRM1Q86U86 1689 aa28.65■■■□□ 2.18
WDR53-201ENST00000332629 TDRD9Q8NDG6 1382 aaKnown RBP28.57■■■□□ 2.16
WDR53-201ENST00000332629 AQRO60306 1485 aaKnown RBP eCLIP28.57■■■□□ 2.16
WDR53-201ENST00000332629 RUSC2Q8N2Y8 1516 aa28.53■■■□□ 2.16
WDR53-201ENST00000332629 GAPVD1Q14C86 1478 aa28.48■■■□□ 2.15
WDR53-201ENST00000332629 KIF27Q86VH2 1401 aa28.41■■■□□ 2.14
WDR53-201ENST00000332629 GRIN2BQ13224 1484 aa28.37■■■□□ 2.13
WDR53-201ENST00000332629 SNAPC4Q5SXM2 1469 aa28.36■■■□□ 2.13
WDR53-201ENST00000332629 CHD1O14646 1710 aa28.35■■■□□ 2.13
WDR53-201ENST00000332629 ERICH3Q5RHP9 1530 aa28.35■■■□□ 2.13
WDR53-201ENST00000332629 ADAMTS12P58397 1594 aa28.33■■■□□ 2.13
WDR53-201ENST00000332629 CUL7Q14999 1698 aa28.29■■■□□ 2.12
WDR53-201ENST00000332629 FAM9AQ8IZU1 332 aaPredicted RBP28.26■■■□□ 2.11
WDR53-201ENST00000332629 MAGI1Q96QZ7 1491 aaPredicted RBP28.25■■■□□ 2.11
WDR53-201ENST00000332629 IGF1RP08069 1367 aa28.22■■■□□ 2.11
WDR53-201ENST00000332629 EEA1Q15075 1411 aa28.18■■■□□ 2.1
WDR53-201ENST00000332629 SYNJ2O15056 1496 aa28.14■■■□□ 2.1
WDR53-201ENST00000332629 FHAD1B1AJZ9 1412 aa28.12■■■□□ 2.09
WDR53-201ENST00000332629 CARMIL1Q5VZK9 1371 aa28.07■■■□□ 2.08
WDR53-201ENST00000332629 GRIN2AQ12879 1464 aa28.07■■■□□ 2.08
WDR53-201ENST00000332629 KIF21BO75037 1637 aa28.06■■■□□ 2.08
WDR53-201ENST00000332629 PRXQ9BXM0 1461 aa28.06■■■□□ 2.08
WDR53-201ENST00000332629 CSRNP3Q8WYN3 585 aa28.06■■■□□ 2.08
WDR53-201ENST00000332629 FBLN2P98095 1184 aa28.04■■■□□ 2.08
WDR53-201ENST00000332629 CEP170Q5SW79 1584 aa28.03■■■□□ 2.08
WDR53-201ENST00000332629 RAPGEF2Q9Y4G8 1499 aa28.01■■■□□ 2.07
WDR53-201ENST00000332629 CTTNBP2Q8WZ74 1663 aa28■■■□□ 2.07
WDR53-201ENST00000332629 CHMP7Q8WUX9 453 aaPredicted RBP27.98■■■□□ 2.07
WDR53-201ENST00000332629 EHMT2Q96KQ7 1210 aa27.94■■■□□ 2.06
WDR53-201ENST00000332629 NUP160Q12769 1436 aa27.88■■■□□ 2.05
WDR53-201ENST00000332629 CLASP1Q7Z460 1538 aa27.87■■■□□ 2.05
WDR53-201ENST00000332629 GOLGA3Q08378 1498 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms