RNA–Protein interactions for RNA: ENST00000423228.1

MCCD1P2-201, Transcript of mitochondrial coiled-coil domain 1 pseudogene 2, humanhuman

BASIC

Gene MCCD1P2, Length 335 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P2-201ENST00000423228 NISCHQ9Y2I1 1504 aa41.99■■■■■ 4.31
MCCD1P2-201ENST00000423228 CCDC180Q9P1Z9 1646 aa37.58■■■■□ 3.61
MCCD1P2-201ENST00000423228 ABCC9O60706 1549 aa37.22■■■■□ 3.55
MCCD1P2-201ENST00000423228 RB1CC1Q8TDY2 1594 aa35.63■■■■□ 3.29
MCCD1P2-201ENST00000423228 NACADO15069 1562 aa35.48■■■■□ 3.27
MCCD1P2-201ENST00000423228 DCAF8L2P0C7V8 631 aa35.19■■■■□ 3.22
MCCD1P2-201ENST00000423228 MYO15BQ96JP2 1530 aa35.15■■■■□ 3.22
MCCD1P2-201ENST00000423228 ZCCHC6Q5VYS8 1495 aaKnown RBP34.85■■■■□ 3.17
MCCD1P2-201ENST00000423228 UNC13AQ9UPW8 1703 aa34.79■■■■□ 3.16
MCCD1P2-201ENST00000423228 DCAF1Q9Y4B6 1507 aa34.77■■■■□ 3.16
MCCD1P2-201ENST00000423228 DNAJC5BQ9UF47 199 aa34.72■■■■□ 3.15
MCCD1P2-201ENST00000423228 PABPN1Q86U42 306 aaKnown RBP eCLIP34.69■■■■□ 3.14
MCCD1P2-201ENST00000423228 BICRAQ9NZM4 1560 aa34.57■■■■□ 3.13
MCCD1P2-201ENST00000423228 SHROOM4Q9ULL8 1493 aa34.23■■■■□ 3.07
MCCD1P2-201ENST00000423228 SCRIBQ14160 1630 aa34.15■■■■□ 3.06
MCCD1P2-201ENST00000423228 EIF4G1Q04637 1599 aaKnown RBP33.69■■■□□ 2.98
MCCD1P2-201ENST00000423228 CC2D2AQ9P2K1 1620 aa33.68■■■□□ 2.98
MCCD1P2-201ENST00000423228 CECR2Q9BXF3 1484 aa33.55■■■□□ 2.96
MCCD1P2-201ENST00000423228 NCAPD3P42695 1498 aa32.77■■■□□ 2.84
MCCD1P2-201ENST00000423228 SMARCA4P51532 1647 aa32.68■■■□□ 2.82
MCCD1P2-201ENST00000423228 ATAD2BQ9ULI0 1458 aa32.66■■■□□ 2.82
MCCD1P2-201ENST00000423228 SMARCA2P51531 1590 aa32.59■■■□□ 2.81
MCCD1P2-201ENST00000423228 BAZ1AQ9NRL2 1556 aaPredicted RBP32.58■■■□□ 2.81
MCCD1P2-201ENST00000423228 HMGXB3Q12766 1538 aa32.52■■■□□ 2.8
MCCD1P2-201ENST00000423228 PEG3Q9GZU2 1588 aa32.43■■■□□ 2.78
MCCD1P2-201ENST00000423228 BAZ1BQ9UIG0 1483 aaKnown RBP32.33■■■□□ 2.77
MCCD1P2-201ENST00000423228 MROH2BQ7Z745 1585 aa32.32■■■□□ 2.76
MCCD1P2-201ENST00000423228 ERCC6Q03468 1493 aa32.13■■■□□ 2.73
MCCD1P2-201ENST00000423228 CUX2O14529 1486 aa32.06■■■□□ 2.72
MCCD1P2-201ENST00000423228 NESP48681 1621 aa32.06■■■□□ 2.72
MCCD1P2-201ENST00000423228 LAMC3Q9Y6N6 1575 aa31.95■■■□□ 2.71
MCCD1P2-201ENST00000423228 WIZO95785 1651 aa31.92■■■□□ 2.7
MCCD1P2-201ENST00000423228 RSF1Q96T23 1441 aaPredicted RBP31.77■■■□□ 2.68
MCCD1P2-201ENST00000423228 PDS5BQ9NTI5 1447 aa31.75■■■□□ 2.67
MCCD1P2-201ENST00000423228 DNAJC5Q9H3Z4 198 aa31.75■■■□□ 2.67
MCCD1P2-201ENST00000423228 CADPSQ9ULU8 1353 aa31.75■■■□□ 2.67
MCCD1P2-201ENST00000423228 THOC2Q8NI27 1593 aaKnown RBP31.72■■■□□ 2.67
MCCD1P2-201ENST00000423228 KIF21AQ7Z4S6 1674 aa31.67■■■□□ 2.66
MCCD1P2-201ENST00000423228 TOP2AP11388 1531 aaKnown RBP31.58■■■□□ 2.65
MCCD1P2-201ENST00000423228 CFTRP13569 1480 aa31.46■■■□□ 2.63
MCCD1P2-201ENST00000423228 MRC2Q9UBG0 1479 aa31.45■■■□□ 2.62
MCCD1P2-201ENST00000423228 WDR62O43379 1518 aa31.38■■■□□ 2.61
MCCD1P2-201ENST00000423228 CEP164Q9UPV0 1460 aa31.36■■■□□ 2.61
MCCD1P2-201ENST00000423228 FANCD2Q9BXW9 1451 aa31.35■■■□□ 2.61
MCCD1P2-201ENST00000423228 CCDC88BA6NC98 1476 aa31.21■■■□□ 2.59
MCCD1P2-201ENST00000423228 PRDM2Q13029 1718 aa31.14■■■□□ 2.58
MCCD1P2-201ENST00000423228 URB2Q14146 1524 aaKnown RBP31.08■■■□□ 2.57
MCCD1P2-201ENST00000423228 ABCC8Q09428 1581 aa30.81■■■□□ 2.52
MCCD1P2-201ENST00000423228 TOPBP1Q92547 1522 aa30.79■■■□□ 2.52
MCCD1P2-201ENST00000423228 IFT140Q96RY7 1462 aa30.76■■■□□ 2.51
MCCD1P2-201ENST00000423228 DNMBPQ6XZF7 1577 aa30.71■■■□□ 2.51
MCCD1P2-201ENST00000423228 ZNF608Q9ULD9 1512 aaPredicted RBP30.63■■■□□ 2.49
MCCD1P2-201ENST00000423228 OSCARQ8IYS5 282 aa30.63■■■□□ 2.49
MCCD1P2-201ENST00000423228 TARBP1Q13395 1621 aaKnown RBP30.52■■■□□ 2.48
MCCD1P2-201ENST00000423228 POLA1P09884 1462 aaPredicted RBP30.5■■■□□ 2.47
MCCD1P2-201ENST00000423228 EIF4G3O43432 1585 aaKnown RBP30.48■■■□□ 2.47
MCCD1P2-201ENST00000423228 SUPT5HO00267 1087 aaKnown RBP30.45■■■□□ 2.47
MCCD1P2-201ENST00000423228 AQRO60306 1485 aaKnown RBP eCLIP30.39■■■□□ 2.46
MCCD1P2-201ENST00000423228 SOGA1O94964 1423 aa30.36■■■□□ 2.45
MCCD1P2-201ENST00000423228 CUX1P39880 1505 aa30.35■■■□□ 2.45
MCCD1P2-201ENST00000423228 RAD54L2Q9Y4B4 1467 aa30.34■■■□□ 2.45
MCCD1P2-201ENST00000423228 FGD5Q6ZNL6 1462 aa30.33■■■□□ 2.45
MCCD1P2-201ENST00000423228 TRIM41Q8WV44 630 aa30.33■■■□□ 2.45
MCCD1P2-201ENST00000423228 WDR97A6NE52 1622 aa30.29■■■□□ 2.44
MCCD1P2-201ENST00000423228 TDRD9Q8NDG6 1382 aaKnown RBP30.24■■■□□ 2.43
MCCD1P2-201ENST00000423228 CHD1O14646 1710 aa30.19■■■□□ 2.42
MCCD1P2-201ENST00000423228 RIMBP3CA6NJZ7 1639 aa30.16■■■□□ 2.42
MCCD1P2-201ENST00000423228 RIMBP3BA6NNM3 1639 aa30.16■■■□□ 2.42
MCCD1P2-201ENST00000423228 RIMBP3Q9UFD9 1639 aa30.16■■■□□ 2.42
MCCD1P2-201ENST00000423228 ARHGEF11O15085 1522 aa30.11■■■□□ 2.41
MCCD1P2-201ENST00000423228 GRIN2BQ13224 1484 aa30.08■■■□□ 2.41
MCCD1P2-201ENST00000423228 SNAPC4Q5SXM2 1469 aa30.08■■■□□ 2.41
MCCD1P2-201ENST00000423228 FBLN2P98095 1184 aa30.08■■■□□ 2.41
MCCD1P2-201ENST00000423228 MAGI1Q96QZ7 1491 aaPredicted RBP30.07■■■□□ 2.4
MCCD1P2-201ENST00000423228 ABCA10Q8WWZ4 1543 aa30.05■■■□□ 2.4
MCCD1P2-201ENST00000423228 GAPVD1Q14C86 1478 aa30■■■□□ 2.39
MCCD1P2-201ENST00000423228 CHMP7Q8WUX9 453 aaPredicted RBP29.97■■■□□ 2.39
MCCD1P2-201ENST00000423228 WRNQ14191 1432 aaPredicted RBP eCLIP29.96■■■□□ 2.39
MCCD1P2-201ENST00000423228 TOP2BQ02880 1626 aa29.96■■■□□ 2.39
MCCD1P2-201ENST00000423228 SYNJ2O15056 1496 aa29.96■■■□□ 2.39
MCCD1P2-201ENST00000423228 ABCA5Q8WWZ7 1642 aa29.96■■■□□ 2.39
MCCD1P2-201ENST00000423228 BIVM-ERCC5R4GMW8 1640 aa29.96■■■□□ 2.39
MCCD1P2-201ENST00000423228 PBRM1Q86U86 1689 aa29.95■■■□□ 2.38
MCCD1P2-201ENST00000423228 CLASP1Q7Z460 1538 aa29.91■■■□□ 2.38
MCCD1P2-201ENST00000423228 SYNJ1O43426 1573 aa29.9■■■□□ 2.38
MCCD1P2-201ENST00000423228 CYB5RLQ6IPT4 315 aa29.84■■■□□ 2.37
MCCD1P2-201ENST00000423228 ARAP1Q96P48 1450 aa29.82■■■□□ 2.36
MCCD1P2-201ENST00000423228 ADAMTS12P58397 1594 aa29.69■■■□□ 2.34
MCCD1P2-201ENST00000423228 GRIN2AQ12879 1464 aa29.69■■■□□ 2.34
MCCD1P2-201ENST00000423228 ERICH3Q5RHP9 1530 aa29.68■■■□□ 2.34
MCCD1P2-201ENST00000423228 FHAD1B1AJZ9 1412 aa29.65■■■□□ 2.34
MCCD1P2-201ENST00000423228 NUP160Q12769 1436 aa29.62■■■□□ 2.33
MCCD1P2-201ENST00000423228 CEP170Q5SW79 1584 aa29.55■■■□□ 2.32
MCCD1P2-201ENST00000423228 SHROOM2Q13796 1616 aa29.45■■■□□ 2.3
MCCD1P2-201ENST00000423228 ERCC6L2Q5T890 1561 aa29.39■■■□□ 2.3
MCCD1P2-201ENST00000423228 KIF27Q86VH2 1401 aa29.38■■■□□ 2.29
MCCD1P2-201ENST00000423228 TRHP20396 242 aaPredicted RBP29.38■■■□□ 2.29
MCCD1P2-201ENST00000423228 IGF1RP08069 1367 aa29.36■■■□□ 2.29
MCCD1P2-201ENST00000423228 JPH4Q96JJ6 628 aa29.29■■■□□ 2.28
MCCD1P2-201ENST00000423228 CUL7Q14999 1698 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms