RNA–Protein interactions for RNA: ENST00000381271.6

KLHL42-201, Transcript of kelch like family member 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHL42, Length 6,703 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-201ENST00000381271 DCAF8L2P0C7V8 631 aa27.59■■■□□ 2.01
KLHL42-201ENST00000381271 SUPT5HO00267 1087 aaKnown RBP25.97■■□□□ 1.75
KLHL42-201ENST00000381271 EHMT2Q96KQ7 1210 aa25.89■■□□□ 1.74
KLHL42-201ENST00000381271 SHROOM4Q9ULL8 1493 aa25.35■■□□□ 1.65
KLHL42-201ENST00000381271 PELP1Q8IZL8 1130 aaKnown RBP25.27■■□□□ 1.64
KLHL42-201ENST00000381271 TTBK1Q5TCY1 1321 aaPredicted RBP24.98■■□□□ 1.59
KLHL42-201ENST00000381271 APLP2Q06481 763 aa24.95■■□□□ 1.58
KLHL42-201ENST00000381271 FAM9AQ8IZU1 332 aaPredicted RBP24.74■■□□□ 1.55
KLHL42-201ENST00000381271 RANGAP1P46060 587 aaPredicted RBP24.61■■□□□ 1.53
KLHL42-201ENST00000381271 ERICH6Q7L0X2 663 aa24.57■■□□□ 1.52
KLHL42-201ENST00000381271 PCGF6Q9BYE7 350 aa24.5■■□□□ 1.51
KLHL42-201ENST00000381271 ATP1B4Q9UN42 357 aaPredicted RBP24.37■■□□□ 1.49
KLHL42-201ENST00000381271 CCER1Q8TC90 406 aaPredicted RBP24.19■■□□□ 1.46
KLHL42-201ENST00000381271 NISCHQ9Y2I1 1504 aa24.16■■□□□ 1.46
KLHL42-201ENST00000381271 CENPBP07199 599 aaPredicted RBP24.13■■□□□ 1.45
KLHL42-201ENST00000381271 YTHDC1Q96MU7 727 aaKnown RBP24.02■■□□□ 1.44
KLHL42-201ENST00000381271 NEFLP07196 543 aa23.85■■□□□ 1.41
KLHL42-201ENST00000381271 TRIM41Q8WV44 630 aa23.82■■□□□ 1.4
KLHL42-201ENST00000381271 UBTFP17480 764 aaKnown RBP23.81■■□□□ 1.4
KLHL42-201ENST00000381271 PPARGC1BQ86YN6 1023 aaKnown RBP23.74■■□□□ 1.39
KLHL42-201ENST00000381271 ZEB1P37275 1124 aaPredicted RBP23.72■■□□□ 1.39
KLHL42-201ENST00000381271 MYT1Q01538 1121 aa23.72■■□□□ 1.39
KLHL42-201ENST00000381271 CHIC1Q5VXU3 224 aa23.68■■□□□ 1.38
KLHL42-201ENST00000381271 POLR3GLQ9BT43 218 aa23.58■■□□□ 1.37
KLHL42-201ENST00000381271 MYT1LQ9UL68 1186 aa23.54■■□□□ 1.36
KLHL42-201ENST00000381271 CNGB1Q14028 1251 aaPredicted RBP23.51■■□□□ 1.35
KLHL42-201ENST00000381271 DAXXQ9UER7 740 aaPredicted RBP23.43■■□□□ 1.34
KLHL42-201ENST00000381271 ITGAEP38570 1179 aa23.41■■□□□ 1.34
KLHL42-201ENST00000381271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.34■■□□□ 1.33
KLHL42-201ENST00000381271 HNRNPUL2Q1KMD3 747 aaKnown RBP23.34■■□□□ 1.33
KLHL42-201ENST00000381271 SLC4A1APQ9BWU0 796 aaKnown RBP23.2■■□□□ 1.3
KLHL42-201ENST00000381271 TRIM26Q12899 539 aaPredicted RBP22.95■■□□□ 1.26
KLHL42-201ENST00000381271 CLSPNQ9HAW4 1339 aa22.92■■□□□ 1.26
KLHL42-201ENST00000381271 HRCP23327 699 aa22.89■■□□□ 1.25
KLHL42-201ENST00000381271 ZNF316A6NFI3 1004 aaPredicted RBP22.87■■□□□ 1.25
KLHL42-201ENST00000381271 LOC105371045A0A1W2PR82 267 aa22.8■■□□□ 1.24
KLHL42-201ENST00000381271 BCL11AQ9H165 835 aa22.77■■□□□ 1.24
KLHL42-201ENST00000381271 RTL5Q5HYW3 569 aaPredicted RBP22.73■■□□□ 1.23
KLHL42-201ENST00000381271 SLC24A1O60721 1099 aa22.64■■□□□ 1.21
KLHL42-201ENST00000381271 FAM50AQ14320 339 aaKnown RBP22.58■■□□□ 1.2
KLHL42-201ENST00000381271 BCANQ96GW7 911 aa22.57■■□□□ 1.2
KLHL42-201ENST00000381271 TRIM52Q96A61 297 aa22.55■■□□□ 1.2
KLHL42-201ENST00000381271 NEUROD1Q13562 356 aa22.52■■□□□ 1.2
KLHL42-201ENST00000381271 DIEXFQ68CQ4 756 aaKnown RBP22.48■■□□□ 1.19
KLHL42-201ENST00000381271 ZNF326Q5BKZ1 582 aaKnown RBP22.46■■□□□ 1.19
KLHL42-201ENST00000381271 PLPPR3Q6T4P5 718 aa22.38■■□□□ 1.17
KLHL42-201ENST00000381271 ZBTB47Q9UFB7 747 aaPredicted RBP22.38■■□□□ 1.17
KLHL42-201ENST00000381271 CANXP27824 592 aaKnown RBP22.24■■□□□ 1.15
KLHL42-201ENST00000381271 FBLN2P98095 1184 aa22.17■■□□□ 1.14
KLHL42-201ENST00000381271 CDK11AQ9UQ88 783 aaPredicted RBP22.17■■□□□ 1.14
KLHL42-201ENST00000381271 ANP32CO43423 234 aa22.17■■□□□ 1.14
KLHL42-201ENST00000381271 GTF3C3Q9Y5Q9 886 aa22.14■■□□□ 1.14
KLHL42-201ENST00000381271 PABPN1Q86U42 306 aaKnown RBP eCLIP22.12■■□□□ 1.13
KLHL42-201ENST00000381271 ARID3CA6NKF2 412 aa22.1■■□□□ 1.13
KLHL42-201ENST00000381271 NPM2Q86SE8 214 aaKnown RBP22.03■■□□□ 1.12
KLHL42-201ENST00000381271 NEFMP07197 916 aa22.01■■□□□ 1.11
KLHL42-201ENST00000381271 ABCC9O60706 1549 aa21.96■■□□□ 1.11
KLHL42-201ENST00000381271 P3H3Q8IVL6 736 aa21.93■■□□□ 1.1
KLHL42-201ENST00000381271 ZNF777Q9ULD5 760 aaPredicted RBP21.86■■□□□ 1.09
KLHL42-201ENST00000381271 A0A0G2JS52 829 aa21.84■■□□□ 1.09
KLHL42-201ENST00000381271 ANP32AP39687 249 aaKnown RBP21.83■■□□□ 1.09
KLHL42-201ENST00000381271 EIF5BO60841 1220 aaKnown RBP21.8■■□□□ 1.08
KLHL42-201ENST00000381271 PLEKHG5O94827 1062 aa21.8■■□□□ 1.08
KLHL42-201ENST00000381271 HSP90AA1P07900 732 aaKnown RBP21.76■■□□□ 1.07
KLHL42-201ENST00000381271 CHGAP10645 457 aaKnown RBP21.75■■□□□ 1.07
KLHL42-201ENST00000381271 SALL2Q9Y467 1007 aaPredicted RBP21.73■■□□□ 1.07
KLHL42-201ENST00000381271 ESF1Q9H501 851 aaKnown RBP21.71■■□□□ 1.07
KLHL42-201ENST00000381271 SCAF1Q9H7N4 1312 aaKnown RBP21.68■■□□□ 1.06
KLHL42-201ENST00000381271 ANP32BQ92688 251 aaKnown RBP21.67■■□□□ 1.06
KLHL42-201ENST00000381271 STAG3Q9UJ98 1225 aa21.66■■□□□ 1.06
KLHL42-201ENST00000381271 ARXQ96QS3 562 aa21.65■■□□□ 1.06
KLHL42-201ENST00000381271 FKBP8Q14318 412 aa21.61■■□□□ 1.05
KLHL42-201ENST00000381271 SENP3Q9H4L4 574 aaPredicted RBP21.61■■□□□ 1.05
KLHL42-201ENST00000381271 FAM9BQ8IZU0 186 aa21.57■■□□□ 1.04
KLHL42-201ENST00000381271 TULP1O00294 542 aaPredicted RBP21.53■■□□□ 1.04
KLHL42-201ENST00000381271 ACIN1Q9UKV3 1341 aaKnown RBP21.52■■□□□ 1.04
KLHL42-201ENST00000381271 UPF2Q9HAU5 1272 aaKnown RBP21.51■■□□□ 1.03
KLHL42-201ENST00000381271 HNRNPUQ00839 825 aaKnown RBP eCLIP21.5■■□□□ 1.03
KLHL42-201ENST00000381271 NBR1Q14596 966 aa21.49■■□□□ 1.03
KLHL42-201ENST00000381271 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.44■■□□□ 1.024e-9■■□□□ 11.7
KLHL42-201ENST00000381271 DDX10Q13206 875 aaKnown RBP21.42■■□□□ 1.02
KLHL42-201ENST00000381271 NPM1P06748 294 aaKnown RBP eCLIP21.41■■□□□ 1.02
KLHL42-201ENST00000381271 ZBTB7CA1YPR0 619 aa21.4■■□□□ 1.02
KLHL42-201ENST00000381271 NCBP3Q53F19 620 aaKnown RBP21.37■■□□□ 1.01
KLHL42-201ENST00000381271 TONSLQ96HA7 1378 aa21.37■■□□□ 1.01
KLHL42-201ENST00000381271 CHIC2Q9UKJ5 165 aa21.34■■□□□ 1.01
KLHL42-201ENST00000381271 CCDC136Q96JN2 1154 aa21.32■■□□□ 1
KLHL42-201ENST00000381271 KDM2AQ9Y2K7 1162 aa21.32■■□□□ 1
KLHL42-201ENST00000381271 IRX6P78412 446 aaPredicted RBP21.31■■□□□ 1
KLHL42-201ENST00000381271 TMC1Q8TDI8 760 aa21.31■■□□□ 1
KLHL42-201ENST00000381271 WDR43Q15061 677 aaKnown RBP eCLIP21.27■■□□□ 1
KLHL42-201ENST00000381271 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.27■■□□□ 1
KLHL42-201ENST00000381271 CSRNP3Q8WYN3 585 aa21.26■□□□□ 0.99
KLHL42-201ENST00000381271 CDK11BP21127 795 aaKnown RBP21.25■□□□□ 0.99
KLHL42-201ENST00000381271 C14orf37Q86TY3 774 aa21.22■□□□□ 0.99
KLHL42-201ENST00000381271 HIRIP3Q9BW71 556 aaPredicted RBP21.21■□□□□ 0.99
KLHL42-201ENST00000381271 SENP3-EIF4A1A0A087X0R7 540 aa21.18■□□□□ 0.98
KLHL42-201ENST00000381271 GLIPR1L2Q4G1C9 344 aa21.18■□□□□ 0.98
KLHL42-201ENST00000381271 TPRNQ4KMQ1 711 aa21.18■□□□□ 0.98
KLHL42-201ENST00000381271 MRS2Q9HD23 443 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms