RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 NISCHQ9Y2I1 1504 aa31.05■■■□□ 2.56
PBX1-219ENST00000560641 HRCP23327 699 aa27.26■■□□□ 1.95
PBX1-219ENST00000560641 MYO15BQ96JP2 1530 aa26.67■■□□□ 1.86
PBX1-219ENST00000560641 DCAF1Q9Y4B6 1507 aa26.53■■□□□ 1.84
PBX1-219ENST00000560641 PELP1Q8IZL8 1130 aaKnown RBP26.53■■□□□ 1.84
PBX1-219ENST00000560641 ZCCHC6Q5VYS8 1495 aaKnown RBP26.53■■□□□ 1.84
PBX1-219ENST00000560641 SHROOM4Q9ULL8 1493 aa26.49■■□□□ 1.83
PBX1-219ENST00000560641 CHIC1Q5VXU3 224 aa26.43■■□□□ 1.82
PBX1-219ENST00000560641 SUPT5HO00267 1087 aaKnown RBP26.38■■□□□ 1.81
PBX1-219ENST00000560641 PCGF6Q9BYE7 350 aa26.29■■□□□ 1.8
PBX1-219ENST00000560641 CCDC180Q9P1Z9 1646 aa26.27■■□□□ 1.8
PBX1-219ENST00000560641 PPARGC1BQ86YN6 1023 aaKnown RBP26.18■■□□□ 1.78
PBX1-219ENST00000560641 TRIM26Q12899 539 aaPredicted RBP25.86■■□□□ 1.73
PBX1-219ENST00000560641 ZEB1P37275 1124 aaPredicted RBP25.84■■□□□ 1.73
PBX1-219ENST00000560641 MYT1Q01538 1121 aa25.63■■□□□ 1.69
PBX1-219ENST00000560641 SCAF1Q9H7N4 1312 aaKnown RBP25.59■■□□□ 1.69
PBX1-219ENST00000560641 LOC105371045A0A1W2PR82 267 aa25.43■■□□□ 1.66
PBX1-219ENST00000560641 ABCC9O60706 1549 aa25.26■■□□□ 1.63
PBX1-219ENST00000560641 ACIN1Q9UKV3 1341 aaKnown RBP25.1■■□□□ 1.61
PBX1-219ENST00000560641 RB1CC1Q8TDY2 1594 aa24.87■■□□□ 1.57
PBX1-219ENST00000560641 NEUROD1Q13562 356 aa24.85■■□□□ 1.57
PBX1-219ENST00000560641 RSF1Q96T23 1441 aaPredicted RBP24.82■■□□□ 1.56
PBX1-219ENST00000560641 CENPBP07199 599 aaPredicted RBP24.77■■□□□ 1.56
PBX1-219ENST00000560641 TRIM41Q8WV44 630 aa24.68■■□□□ 1.54
PBX1-219ENST00000560641 GTF3C3Q9Y5Q9 886 aa24.67■■□□□ 1.54
PBX1-219ENST00000560641 DCAF8L2P0C7V8 631 aa24.61■■□□□ 1.53
PBX1-219ENST00000560641 DIEXFQ68CQ4 756 aaKnown RBP24.56■■□□□ 1.52
PBX1-219ENST00000560641 WRNQ14191 1432 aaPredicted RBP eCLIP24.51■■□□□ 1.519e-6■■■■■ 50.1
PBX1-219ENST00000560641 EIF4G1Q04637 1599 aaKnown RBP24.43■■□□□ 1.5
PBX1-219ENST00000560641 CCER1Q8TC90 406 aaPredicted RBP24.4■■□□□ 1.5
PBX1-219ENST00000560641 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.36■■□□□ 1.49
PBX1-219ENST00000560641 SCRIBQ14160 1630 aa24.32■■□□□ 1.48
PBX1-219ENST00000560641 ZNF316A6NFI3 1004 aaPredicted RBP24.22■■□□□ 1.47
PBX1-219ENST00000560641 FAM9AQ8IZU1 332 aaPredicted RBP24.22■■□□□ 1.47
PBX1-219ENST00000560641 TTBK1Q5TCY1 1321 aaPredicted RBP24.17■■□□□ 1.46
PBX1-219ENST00000560641 CLSPNQ9HAW4 1339 aa24.16■■□□□ 1.46
PBX1-219ENST00000560641 BAZ1AQ9NRL2 1556 aaPredicted RBP24.15■■□□□ 1.46
PBX1-219ENST00000560641 MROH2BQ7Z745 1585 aa24.07■■□□□ 1.44
PBX1-219ENST00000560641 WIZO95785 1651 aa24.02■■□□□ 1.44
PBX1-219ENST00000560641 TNIKQ9UKE5 1360 aa24.02■■□□□ 1.44
PBX1-219ENST00000560641 CEP162Q5TB80 1403 aa24.01■■□□□ 1.43
PBX1-219ENST00000560641 EEA1Q15075 1411 aa23.96■■□□□ 1.43
PBX1-219ENST00000560641 CECR2Q9BXF3 1484 aa23.96■■□□□ 1.43
PBX1-219ENST00000560641 NACADO15069 1562 aa23.91■■□□□ 1.42
PBX1-219ENST00000560641 MIER1Q8N108 512 aa23.87■■□□□ 1.41
PBX1-219ENST00000560641 TOP2AP11388 1531 aaKnown RBP23.79■■□□□ 1.4
PBX1-219ENST00000560641 CCDC88BA6NC98 1476 aa23.77■■□□□ 1.4
PBX1-219ENST00000560641 EHMT2Q96KQ7 1210 aa23.75■■□□□ 1.39
PBX1-219ENST00000560641 YTHDC1Q96MU7 727 aaKnown RBP23.71■■□□□ 1.39
PBX1-219ENST00000560641 ABCC8Q09428 1581 aa23.71■■□□□ 1.39
PBX1-219ENST00000560641 GOLGA3Q08378 1498 aa23.7■■□□□ 1.38
PBX1-219ENST00000560641 ANP32EQ9BTT0 268 aa23.67■■□□□ 1.38
PBX1-219ENST00000560641 KIF21BO75037 1637 aa23.66■■□□□ 1.38
PBX1-219ENST00000560641 SUPT16HQ9Y5B9 1047 aaKnown RBP23.66■■□□□ 1.38
PBX1-219ENST00000560641 SMARCA2P51531 1590 aa23.66■■□□□ 1.38
PBX1-219ENST00000560641 SOGA1O94964 1423 aa23.6■■□□□ 1.37
PBX1-219ENST00000560641 TSHZ2Q9NRE2 1034 aa23.55■■□□□ 1.36
PBX1-219ENST00000560641 CSRNP3Q8WYN3 585 aa23.52■■□□□ 1.36
PBX1-219ENST00000560641 BAZ1BQ9UIG0 1483 aaKnown RBP23.5■■□□□ 1.35
PBX1-219ENST00000560641 SMARCA4P51532 1647 aa23.5■■□□□ 1.35
PBX1-219ENST00000560641 CEP164Q9UPV0 1460 aa23.49■■□□□ 1.35
PBX1-219ENST00000560641 VPS8Q8N3P4 1428 aa23.48■■□□□ 1.35
PBX1-219ENST00000560641 BCL11AQ9H165 835 aa23.45■■□□□ 1.34
PBX1-219ENST00000560641 RUSC2Q8N2Y8 1516 aa23.43■■□□□ 1.34
PBX1-219ENST00000560641 CLIP1P30622 1438 aa23.38■■□□□ 1.33
PBX1-219ENST00000560641 CUX2O14529 1486 aa23.36■■□□□ 1.33
PBX1-219ENST00000560641 DHX57Q6P158 1386 aaKnown RBP23.35■■□□□ 1.33
PBX1-219ENST00000560641 UBTFP17480 764 aaKnown RBP23.27■■□□□ 1.32
PBX1-219ENST00000560641 HNRNPUL2Q1KMD3 747 aaKnown RBP23.25■■□□□ 1.31
PBX1-219ENST00000560641 PEG3Q9GZU2 1588 aa23.21■■□□□ 1.31
PBX1-219ENST00000560641 SYNJ1O43426 1573 aa23.19■■□□□ 1.3
PBX1-219ENST00000560641 RRBP1Q9P2E9 1410 aaKnown RBP23.17■■□□□ 1.3
PBX1-219ENST00000560641 ERICH3Q5RHP9 1530 aa23.11■■□□□ 1.29
PBX1-219ENST00000560641 UNC13AQ9UPW8 1703 aa23.06■■□□□ 1.28
PBX1-219ENST00000560641 RAPGEF2Q9Y4G8 1499 aa23.05■■□□□ 1.28
PBX1-219ENST00000560641 APLP2Q06481 763 aa23.01■■□□□ 1.27
PBX1-219ENST00000560641 ARAP1Q96P48 1450 aa23■■□□□ 1.27
PBX1-219ENST00000560641 RBM19Q9Y4C8 960 aaKnown RBP22.96■■□□□ 1.27
PBX1-219ENST00000560641 MAPKBP1O60336 1514 aa22.96■■□□□ 1.27
PBX1-219ENST00000560641 TOP2BQ02880 1626 aa22.95■■□□□ 1.26
PBX1-219ENST00000560641 BIVM-ERCC5R4GMW8 1640 aa22.95■■□□□ 1.26
PBX1-219ENST00000560641 PRXQ9BXM0 1461 aa22.91■■□□□ 1.26
PBX1-219ENST00000560641 FANCIQ9NVI1 1328 aa22.88■■□□□ 1.25
PBX1-219ENST00000560641 MAP3K1Q13233 1512 aa22.86■■□□□ 1.25
PBX1-219ENST00000560641 CCER2I3L3R5 266 aa22.85■■□□□ 1.25
PBX1-219ENST00000560641 FKBP8Q14318 412 aa22.85■■□□□ 1.25
PBX1-219ENST00000560641 MYT1LQ9UL68 1186 aa22.83■■□□□ 1.25
PBX1-219ENST00000560641 CCNB3Q8WWL7 1395 aa22.82■■□□□ 1.24
PBX1-219ENST00000560641 TIMELESSQ9UNS1 1208 aa22.79■■□□□ 1.24
PBX1-219ENST00000560641 KCNH8Q96L42 1107 aa22.78■■□□□ 1.24
PBX1-219ENST00000560641 PPP1R15AO75807 674 aaPredicted RBP22.76■■□□□ 1.23
PBX1-219ENST00000560641 MSH5O43196 834 aa22.75■■□□□ 1.23
PBX1-219ENST00000560641 WDR97A6NE52 1622 aa22.75■■□□□ 1.23
PBX1-219ENST00000560641 NEFLP07196 543 aa22.74■■□□□ 1.23
PBX1-219ENST00000560641 KANK4Q5T7N3 995 aaPredicted RBP22.7■■□□□ 1.22
PBX1-219ENST00000560641 RAB3GAP2Q9H2M9 1393 aa22.69■■□□□ 1.22
PBX1-219ENST00000560641 BCANQ96GW7 911 aa22.67■■□□□ 1.22
PBX1-219ENST00000560641 ERICH6BQ5W0A0 696 aa22.65■■□□□ 1.22
PBX1-219ENST00000560641 SETD5Q9C0A6 1442 aa22.63■■□□□ 1.21
PBX1-219ENST00000560641 TIAM1Q13009 1591 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms