RNA–Protein interactions for RNA: ENST00000520605.5

SFTPC-204, Transcript of surfactant protein C, humanhuman

TSL 3 BASIC

Gene SFTPC, Length 519 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPC-204ENST00000520605 NISCHQ9Y2I1 1504 aa40.04■■■■■ 4
SFTPC-204ENST00000520605 CCDC180Q9P1Z9 1646 aa35.32■■■■□ 3.24
SFTPC-204ENST00000520605 ABCC9O60706 1549 aa34.17■■■■□ 3.06
SFTPC-204ENST00000520605 ZCCHC6Q5VYS8 1495 aaKnown RBP33.44■■■□□ 2.94
SFTPC-204ENST00000520605 DCAF8L2P0C7V8 631 aa33.4■■■□□ 2.94
SFTPC-204ENST00000520605 NACADO15069 1562 aa33.12■■■□□ 2.89
SFTPC-204ENST00000520605 DCAF1Q9Y4B6 1507 aa33.11■■■□□ 2.89
SFTPC-204ENST00000520605 MYO15BQ96JP2 1530 aa33.05■■■□□ 2.88
SFTPC-204ENST00000520605 RB1CC1Q8TDY2 1594 aa33.04■■■□□ 2.88
SFTPC-204ENST00000520605 SCRIBQ14160 1630 aa32.33■■■□□ 2.77
SFTPC-204ENST00000520605 UNC13AQ9UPW8 1703 aa32.27■■■□□ 2.76
SFTPC-204ENST00000520605 PABPN1Q86U42 306 aaKnown RBP eCLIP32.06■■■□□ 2.72
SFTPC-204ENST00000520605 SHROOM4Q9ULL8 1493 aa32.04■■■□□ 2.72
SFTPC-204ENST00000520605 BICRAQ9NZM4 1560 aa32.01■■■□□ 2.71
SFTPC-204ENST00000520605 DNAJC5BQ9UF47 199 aa31.97■■■□□ 2.71
SFTPC-204ENST00000520605 CECR2Q9BXF3 1484 aa31.17■■■□□ 2.58
SFTPC-204ENST00000520605 EIF4G1Q04637 1599 aaKnown RBP31.13■■■□□ 2.57
SFTPC-204ENST00000520605 BAZ1AQ9NRL2 1556 aaPredicted RBP30.99■■■□□ 2.55
SFTPC-204ENST00000520605 SMARCA4P51532 1647 aa30.95■■■□□ 2.54
SFTPC-204ENST00000520605 CC2D2AQ9P2K1 1620 aa30.89■■■□□ 2.54
SFTPC-204ENST00000520605 MROH2BQ7Z745 1585 aa30.88■■■□□ 2.53
SFTPC-204ENST00000520605 RSF1Q96T23 1441 aaPredicted RBP30.73■■■□□ 2.51
SFTPC-204ENST00000520605 ATAD2BQ9ULI0 1458 aa30.67■■■□□ 2.5
SFTPC-204ENST00000520605 SMARCA2P51531 1590 aa30.65■■■□□ 2.5
SFTPC-204ENST00000520605 DNAJC5Q9H3Z4 198 aa30.61■■■□□ 2.49
SFTPC-204ENST00000520605 PEG3Q9GZU2 1588 aa30.6■■■□□ 2.49
SFTPC-204ENST00000520605 WIZO95785 1651 aa30.58■■■□□ 2.49
SFTPC-204ENST00000520605 NCAPD3P42695 1498 aa30.57■■■□□ 2.48
SFTPC-204ENST00000520605 BAZ1BQ9UIG0 1483 aaKnown RBP30.45■■■□□ 2.47
SFTPC-204ENST00000520605 SUPT5HO00267 1087 aaKnown RBP30.44■■■□□ 2.46
SFTPC-204ENST00000520605 HMGXB3Q12766 1538 aa30.43■■■□□ 2.46
SFTPC-204ENST00000520605 TOP2AP11388 1531 aaKnown RBP30.27■■■□□ 2.44
SFTPC-204ENST00000520605 CCDC88BA6NC98 1476 aa29.94■■■□□ 2.38
SFTPC-204ENST00000520605 CADPSQ9ULU8 1353 aa29.73■■■□□ 2.35
SFTPC-204ENST00000520605 NESP48681 1621 aa29.71■■■□□ 2.35
SFTPC-204ENST00000520605 LAMC3Q9Y6N6 1575 aa29.66■■■□□ 2.34
SFTPC-204ENST00000520605 CFTRP13569 1480 aa29.64■■■□□ 2.34
SFTPC-204ENST00000520605 PDS5BQ9NTI5 1447 aa29.48■■■□□ 2.31
SFTPC-204ENST00000520605 ERCC6Q03468 1493 aa29.41■■■□□ 2.3
SFTPC-204ENST00000520605 PRDM2Q13029 1718 aa29.4■■■□□ 2.3
SFTPC-204ENST00000520605 FANCD2Q9BXW9 1451 aa29.38■■■□□ 2.29
SFTPC-204ENST00000520605 KIF21AQ7Z4S6 1674 aa29.33■■■□□ 2.29
SFTPC-204ENST00000520605 CEP164Q9UPV0 1460 aa29.29■■■□□ 2.28
SFTPC-204ENST00000520605 MRC2Q9UBG0 1479 aa29.14■■■□□ 2.26
SFTPC-204ENST00000520605 THOC2Q8NI27 1593 aaKnown RBP29.09■■■□□ 2.25
SFTPC-204ENST00000520605 URB2Q14146 1524 aaKnown RBP29.04■■■□□ 2.24
SFTPC-204ENST00000520605 ABCC8Q09428 1581 aa29.01■■■□□ 2.23
SFTPC-204ENST00000520605 WDR62O43379 1518 aa28.99■■■□□ 2.23
SFTPC-204ENST00000520605 TOPBP1Q92547 1522 aa28.97■■■□□ 2.23
SFTPC-204ENST00000520605 WRNQ14191 1432 aaPredicted RBP eCLIP28.96■■■□□ 2.23
SFTPC-204ENST00000520605 DNMBPQ6XZF7 1577 aa28.96■■■□□ 2.23
SFTPC-204ENST00000520605 CUX2O14529 1486 aa28.94■■■□□ 2.22
SFTPC-204ENST00000520605 CUX1P39880 1505 aa28.94■■■□□ 2.22
SFTPC-204ENST00000520605 SYNJ1O43426 1573 aa28.84■■■□□ 2.21
SFTPC-204ENST00000520605 TOP2BQ02880 1626 aa28.8■■■□□ 2.2
SFTPC-204ENST00000520605 BIVM-ERCC5R4GMW8 1640 aa28.79■■■□□ 2.2
SFTPC-204ENST00000520605 FGD5Q6ZNL6 1462 aa28.77■■■□□ 2.2
SFTPC-204ENST00000520605 POLA1P09884 1462 aaPredicted RBP28.75■■■□□ 2.19
SFTPC-204ENST00000520605 TRIM41Q8WV44 630 aa28.7■■■□□ 2.18
SFTPC-204ENST00000520605 SOGA1O94964 1423 aa28.69■■■□□ 2.18
SFTPC-204ENST00000520605 CHIC1Q5VXU3 224 aa28.67■■■□□ 2.18
SFTPC-204ENST00000520605 IFT140Q96RY7 1462 aa28.66■■■□□ 2.18
SFTPC-204ENST00000520605 RAD54L2Q9Y4B4 1467 aa28.66■■■□□ 2.18
SFTPC-204ENST00000520605 TARBP1Q13395 1621 aaKnown RBP28.59■■■□□ 2.17
SFTPC-204ENST00000520605 ABCA10Q8WWZ4 1543 aa28.5■■■□□ 2.15
SFTPC-204ENST00000520605 ZNF608Q9ULD9 1512 aaPredicted RBP28.49■■■□□ 2.15
SFTPC-204ENST00000520605 TDRD9Q8NDG6 1382 aaKnown RBP28.47■■■□□ 2.15
SFTPC-204ENST00000520605 WDR97A6NE52 1622 aa28.44■■■□□ 2.14
SFTPC-204ENST00000520605 AQRO60306 1485 aaKnown RBP eCLIP28.42■■■□□ 2.14
SFTPC-204ENST00000520605 EIF4G3O43432 1585 aaKnown RBP28.37■■■□□ 2.13
SFTPC-204ENST00000520605 GAPVD1Q14C86 1478 aa28.34■■■□□ 2.13
SFTPC-204ENST00000520605 KIF27Q86VH2 1401 aa28.33■■■□□ 2.13
SFTPC-204ENST00000520605 ABCA5Q8WWZ7 1642 aa28.32■■■□□ 2.12
SFTPC-204ENST00000520605 GRIN2BQ13224 1484 aa28.26■■■□□ 2.11
SFTPC-204ENST00000520605 RUSC2Q8N2Y8 1516 aa28.24■■■□□ 2.11
SFTPC-204ENST00000520605 PBRM1Q86U86 1689 aa28.2■■■□□ 2.11
SFTPC-204ENST00000520605 IGF1RP08069 1367 aa28.15■■■□□ 2.1
SFTPC-204ENST00000520605 ERICH3Q5RHP9 1530 aa28.15■■■□□ 2.1
SFTPC-204ENST00000520605 SNAPC4Q5SXM2 1469 aa28.15■■■□□ 2.1
SFTPC-204ENST00000520605 FAM9AQ8IZU1 332 aaPredicted RBP28.14■■■□□ 2.1
SFTPC-204ENST00000520605 EEA1Q15075 1411 aa28.1■■■□□ 2.09
SFTPC-204ENST00000520605 MAGI1Q96QZ7 1491 aaPredicted RBP28.1■■■□□ 2.09
SFTPC-204ENST00000520605 CSRNP3Q8WYN3 585 aa28.06■■■□□ 2.08
SFTPC-204ENST00000520605 FBLN2P98095 1184 aa28.04■■■□□ 2.08
SFTPC-204ENST00000520605 FHAD1B1AJZ9 1412 aa28.02■■■□□ 2.08
SFTPC-204ENST00000520605 CHMP7Q8WUX9 453 aaPredicted RBP28.02■■■□□ 2.08
SFTPC-204ENST00000520605 ADAMTS12P58397 1594 aa28.02■■■□□ 2.08
SFTPC-204ENST00000520605 CARMIL1Q5VZK9 1371 aa28■■■□□ 2.07
SFTPC-204ENST00000520605 SYNJ2O15056 1496 aa28■■■□□ 2.07
SFTPC-204ENST00000520605 CUL7Q14999 1698 aa27.99■■■□□ 2.07
SFTPC-204ENST00000520605 CHD1O14646 1710 aa27.92■■■□□ 2.06
SFTPC-204ENST00000520605 GRIN2AQ12879 1464 aa27.89■■■□□ 2.05
SFTPC-204ENST00000520605 PRXQ9BXM0 1461 aa27.88■■■□□ 2.05
SFTPC-204ENST00000520605 RAPGEF2Q9Y4G8 1499 aa27.88■■■□□ 2.05
SFTPC-204ENST00000520605 OSCARQ8IYS5 282 aa27.83■■■□□ 2.05
SFTPC-204ENST00000520605 EHMT2Q96KQ7 1210 aa27.76■■■□□ 2.03
SFTPC-204ENST00000520605 KIF21BO75037 1637 aa27.74■■■□□ 2.03
SFTPC-204ENST00000520605 NUP160Q12769 1436 aa27.73■■■□□ 2.03
SFTPC-204ENST00000520605 CEP170Q5SW79 1584 aa27.72■■■□□ 2.03
SFTPC-204ENST00000520605 GOLGA3Q08378 1498 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms