RNA–Protein interactions for RNA: ENST00000561213.5

CD276-213, Transcript of CD276 molecule, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CD276, Length 2,690 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD276-213ENST00000561213 NISCHQ9Y2I1 1504 aa35.35■■■■□ 3.25
CD276-213ENST00000561213 CCDC180Q9P1Z9 1646 aa30.09■■■□□ 2.41
CD276-213ENST00000561213 SHROOM4Q9ULL8 1493 aa30.02■■■□□ 2.4
CD276-213ENST00000561213 ZCCHC6Q5VYS8 1495 aaKnown RBP29.83■■■□□ 2.37
CD276-213ENST00000561213 DCAF8L2P0C7V8 631 aa29.51■■■□□ 2.31
CD276-213ENST00000561213 SUPT5HO00267 1087 aaKnown RBP29.29■■■□□ 2.28
CD276-213ENST00000561213 DCAF1Q9Y4B6 1507 aa28.95■■■□□ 2.22
CD276-213ENST00000561213 CHIC1Q5VXU3 224 aa28.33■■■□□ 2.13
CD276-213ENST00000561213 ABCC9O60706 1549 aa28.28■■■□□ 2.12
CD276-213ENST00000561213 SCRIBQ14160 1630 aa28.26■■■□□ 2.11
CD276-213ENST00000561213 MYO15BQ96JP2 1530 aa28.21■■■□□ 2.11
CD276-213ENST00000561213 NACADO15069 1562 aa27.94■■■□□ 2.06
CD276-213ENST00000561213 RSF1Q96T23 1441 aaPredicted RBP27.91■■■□□ 2.06
CD276-213ENST00000561213 CECR2Q9BXF3 1484 aa27.67■■■□□ 2.02
CD276-213ENST00000561213 LOC105371045A0A1W2PR82 267 aa27.54■■■□□ 2
CD276-213ENST00000561213 RB1CC1Q8TDY2 1594 aa27.53■■■□□ 2
CD276-213ENST00000561213 MROH2BQ7Z745 1585 aa27.51■■□□□ 1.99
CD276-213ENST00000561213 WIZO95785 1651 aa27.32■■□□□ 1.96
CD276-213ENST00000561213 TRIM41Q8WV44 630 aa27.26■■□□□ 1.96
CD276-213ENST00000561213 UNC13AQ9UPW8 1703 aa27.14■■□□□ 1.94
CD276-213ENST00000561213 PCGF6Q9BYE7 350 aa27.13■■□□□ 1.93
CD276-213ENST00000561213 BAZ1AQ9NRL2 1556 aaPredicted RBP27.13■■□□□ 1.93
CD276-213ENST00000561213 FAM9AQ8IZU1 332 aaPredicted RBP27.1■■□□□ 1.93
CD276-213ENST00000561213 PABPN1Q86U42 306 aaKnown RBP eCLIP27.06■■□□□ 1.92
CD276-213ENST00000561213 SMARCA4P51532 1647 aa26.96■■□□□ 1.91
CD276-213ENST00000561213 EHMT2Q96KQ7 1210 aa26.92■■□□□ 1.9
CD276-213ENST00000561213 BICRAQ9NZM4 1560 aa26.88■■□□□ 1.89
CD276-213ENST00000561213 HRCP23327 699 aa26.87■■□□□ 1.89
CD276-213ENST00000561213 TOP2AP11388 1531 aaKnown RBP26.84■■□□□ 1.89
CD276-213ENST00000561213 CCDC88BA6NC98 1476 aa26.79■■□□□ 1.88
CD276-213ENST00000561213 EIF4G1Q04637 1599 aaKnown RBP26.79■■□□□ 1.88
CD276-213ENST00000561213 SMARCA2P51531 1590 aa26.72■■□□□ 1.87
CD276-213ENST00000561213 TRIM26Q12899 539 aaPredicted RBP26.63■■□□□ 1.85
CD276-213ENST00000561213 ABCC8Q09428 1581 aa26.63■■□□□ 1.85
CD276-213ENST00000561213 PPARGC1BQ86YN6 1023 aaKnown RBP26.48■■□□□ 1.83
CD276-213ENST00000561213 PEG3Q9GZU2 1588 aa26.43■■□□□ 1.82
CD276-213ENST00000561213 ATAD2BQ9ULI0 1458 aa26.39■■□□□ 1.81
CD276-213ENST00000561213 SOGA1O94964 1423 aa26.35■■□□□ 1.81
CD276-213ENST00000561213 BAZ1BQ9UIG0 1483 aaKnown RBP26.27■■□□□ 1.8
CD276-213ENST00000561213 RUSC2Q8N2Y8 1516 aa26.26■■□□□ 1.79
CD276-213ENST00000561213 WRNQ14191 1432 aaPredicted RBP eCLIP26.19■■□□□ 1.78
CD276-213ENST00000561213 CSRNP3Q8WYN3 585 aa26.15■■□□□ 1.78
CD276-213ENST00000561213 SYNJ1O43426 1573 aa26.08■■□□□ 1.76
CD276-213ENST00000561213 CEP162Q5TB80 1403 aa26.03■■□□□ 1.76
CD276-213ENST00000561213 UBTFP17480 764 aaKnown RBP26.02■■□□□ 1.76
CD276-213ENST00000561213 EEA1Q15075 1411 aa26.02■■□□□ 1.76
CD276-213ENST00000561213 TNIKQ9UKE5 1360 aa26■■□□□ 1.75
CD276-213ENST00000561213 TTBK1Q5TCY1 1321 aaPredicted RBP25.94■■□□□ 1.74
CD276-213ENST00000561213 NCAPD3P42695 1498 aa25.91■■□□□ 1.74
CD276-213ENST00000561213 GOLGA3Q08378 1498 aa25.87■■□□□ 1.73
CD276-213ENST00000561213 HMGXB3Q12766 1538 aa25.82■■□□□ 1.72
CD276-213ENST00000561213 ZEB1P37275 1124 aaPredicted RBP25.81■■□□□ 1.72
CD276-213ENST00000561213 CEP164Q9UPV0 1460 aa25.75■■□□□ 1.71
CD276-213ENST00000561213 TOP2BQ02880 1626 aa25.74■■□□□ 1.71
CD276-213ENST00000561213 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.71■■□□□ 1.71
CD276-213ENST00000561213 RAPGEF2Q9Y4G8 1499 aa25.7■■□□□ 1.7
CD276-213ENST00000561213 KIF21BO75037 1637 aa25.7■■□□□ 1.7
CD276-213ENST00000561213 RANGAP1P46060 587 aaPredicted RBP25.66■■□□□ 1.7
CD276-213ENST00000561213 CFTRP13569 1480 aa25.63■■□□□ 1.69
CD276-213ENST00000561213 BIVM-ERCC5R4GMW8 1640 aa25.62■■□□□ 1.69
CD276-213ENST00000561213 CUX1P39880 1505 aa25.62■■□□□ 1.69
CD276-213ENST00000561213 CLIP1P30622 1438 aa25.6■■□□□ 1.69
CD276-213ENST00000561213 CCER1Q8TC90 406 aaPredicted RBP25.56■■□□□ 1.68
CD276-213ENST00000561213 PRXQ9BXM0 1461 aa25.45■■□□□ 1.67
CD276-213ENST00000561213 VPS8Q8N3P4 1428 aa25.43■■□□□ 1.66
CD276-213ENST00000561213 CC2D2AQ9P2K1 1620 aa25.42■■□□□ 1.66
CD276-213ENST00000561213 CADPSQ9ULU8 1353 aa25.42■■□□□ 1.66
CD276-213ENST00000561213 KIF27Q86VH2 1401 aa25.38■■□□□ 1.65
CD276-213ENST00000561213 ERICH3Q5RHP9 1530 aa25.34■■□□□ 1.65
CD276-213ENST00000561213 APLP2Q06481 763 aa25.3■■□□□ 1.64
CD276-213ENST00000561213 HNRNPUL2Q1KMD3 747 aaKnown RBP25.3■■□□□ 1.64
CD276-213ENST00000561213 PRDM2Q13029 1718 aa25.26■■□□□ 1.63
CD276-213ENST00000561213 ARAP1Q96P48 1450 aa25.24■■□□□ 1.63
CD276-213ENST00000561213 CUX2O14529 1486 aa25.24■■□□□ 1.63
CD276-213ENST00000561213 IGF1RP08069 1367 aa25.21■■□□□ 1.63
CD276-213ENST00000561213 FGD5Q6ZNL6 1462 aa25.19■■□□□ 1.62
CD276-213ENST00000561213 FANCD2Q9BXW9 1451 aa25.16■■□□□ 1.62
CD276-213ENST00000561213 KANK4Q5T7N3 995 aaPredicted RBP25.16■■□□□ 1.62
CD276-213ENST00000561213 NESP48681 1621 aa25.14■■□□□ 1.62
CD276-213ENST00000561213 ARHGAP35Q9NRY4 1499 aa25.09■■□□□ 1.61
CD276-213ENST00000561213 DNAJC5BQ9UF47 199 aa25.08■■□□□ 1.61
CD276-213ENST00000561213 CARMIL1Q5VZK9 1371 aa25.07■■□□□ 1.6
CD276-213ENST00000561213 RAD54L2Q9Y4B4 1467 aa25.03■■□□□ 1.6
CD276-213ENST00000561213 TOPBP1Q92547 1522 aa24.96■■□□□ 1.59
CD276-213ENST00000561213 POLA1P09884 1462 aaPredicted RBP24.94■■□□□ 1.58
CD276-213ENST00000561213 DNMBPQ6XZF7 1577 aa24.94■■□□□ 1.58
CD276-213ENST00000561213 P3H3Q8IVL6 736 aa24.89■■□□□ 1.57
CD276-213ENST00000561213 DIEXFQ68CQ4 756 aaKnown RBP24.87■■□□□ 1.57
CD276-213ENST00000561213 ABCA10Q8WWZ4 1543 aa24.87■■□□□ 1.57
CD276-213ENST00000561213 URB2Q14146 1524 aaKnown RBP24.83■■□□□ 1.57
CD276-213ENST00000561213 RRBP1Q9P2E9 1410 aaKnown RBP24.8■■□□□ 1.56
CD276-213ENST00000561213 LAMC3Q9Y6N6 1575 aa24.79■■□□□ 1.56
CD276-213ENST00000561213 ZNF316A6NFI3 1004 aaPredicted RBP24.77■■□□□ 1.56
CD276-213ENST00000561213 ITGAEP38570 1179 aa24.76■■□□□ 1.55
CD276-213ENST00000561213 TDRD9Q8NDG6 1382 aaKnown RBP24.75■■□□□ 1.55
CD276-213ENST00000561213 CCNB3Q8WWL7 1395 aa24.73■■□□□ 1.55
CD276-213ENST00000561213 ATP1B4Q9UN42 357 aaPredicted RBP24.72■■□□□ 1.55
CD276-213ENST00000561213 DHX57Q6P158 1386 aaKnown RBP24.71■■□□□ 1.55
CD276-213ENST00000561213 FHOD3Q2V2M9 1422 aa24.7■■□□□ 1.54
CD276-213ENST00000561213 TIAM1Q13009 1591 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms