RNA–Protein interactions for RNA: ENST00000509534.5

SIL1-213, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 5 BASIC

Gene SIL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-213ENST00000509534 NISCHQ9Y2I1 1504 aa39.32■■■■□ 3.89
SIL1-213ENST00000509534 CCDC180Q9P1Z9 1646 aa34.6■■■■□ 3.13
SIL1-213ENST00000509534 ABCC9O60706 1549 aa33.06■■■□□ 2.88
SIL1-213ENST00000509534 ZCCHC6Q5VYS8 1495 aaKnown RBP32.94■■■□□ 2.86
SIL1-213ENST00000509534 DCAF8L2P0C7V8 631 aa32.61■■■□□ 2.81
SIL1-213ENST00000509534 DCAF1Q9Y4B6 1507 aa32.54■■■□□ 2.8
SIL1-213ENST00000509534 MYO15BQ96JP2 1530 aa32.33■■■□□ 2.77
SIL1-213ENST00000509534 NACADO15069 1562 aa32.3■■■□□ 2.76
SIL1-213ENST00000509534 RB1CC1Q8TDY2 1594 aa32.16■■■□□ 2.74
SIL1-213ENST00000509534 SCRIBQ14160 1630 aa31.7■■■□□ 2.67
SIL1-213ENST00000509534 SHROOM4Q9ULL8 1493 aa31.7■■■□□ 2.67
SIL1-213ENST00000509534 UNC13AQ9UPW8 1703 aa31.48■■■□□ 2.63
SIL1-213ENST00000509534 BICRAQ9NZM4 1560 aa31.13■■■□□ 2.57
SIL1-213ENST00000509534 PABPN1Q86U42 306 aaKnown RBP eCLIP31.04■■■□□ 2.56
SIL1-213ENST00000509534 CECR2Q9BXF3 1484 aa30.55■■■□□ 2.48
SIL1-213ENST00000509534 BAZ1AQ9NRL2 1556 aaPredicted RBP30.44■■■□□ 2.46
SIL1-213ENST00000509534 SMARCA4P51532 1647 aa30.36■■■□□ 2.45
SIL1-213ENST00000509534 MROH2BQ7Z745 1585 aa30.34■■■□□ 2.45
SIL1-213ENST00000509534 RSF1Q96T23 1441 aaPredicted RBP30.29■■■□□ 2.44
SIL1-213ENST00000509534 SUPT5HO00267 1087 aaKnown RBP30.27■■■□□ 2.44
SIL1-213ENST00000509534 EIF4G1Q04637 1599 aaKnown RBP30.26■■■□□ 2.43
SIL1-213ENST00000509534 WIZO95785 1651 aa30.09■■■□□ 2.41
SIL1-213ENST00000509534 PEG3Q9GZU2 1588 aa30■■■□□ 2.39
SIL1-213ENST00000509534 SMARCA2P51531 1590 aa29.97■■■□□ 2.39
SIL1-213ENST00000509534 ATAD2BQ9ULI0 1458 aa29.94■■■□□ 2.38
SIL1-213ENST00000509534 CC2D2AQ9P2K1 1620 aa29.93■■■□□ 2.38
SIL1-213ENST00000509534 TOP2AP11388 1531 aaKnown RBP29.8■■■□□ 2.36
SIL1-213ENST00000509534 BAZ1BQ9UIG0 1483 aaKnown RBP29.79■■■□□ 2.36
SIL1-213ENST00000509534 NCAPD3P42695 1498 aa29.77■■■□□ 2.36
SIL1-213ENST00000509534 HMGXB3Q12766 1538 aa29.73■■■□□ 2.35
SIL1-213ENST00000509534 DNAJC5BQ9UF47 199 aa29.49■■■□□ 2.31
SIL1-213ENST00000509534 CCDC88BA6NC98 1476 aa29.43■■■□□ 2.3
SIL1-213ENST00000509534 CFTRP13569 1480 aa28.97■■■□□ 2.23
SIL1-213ENST00000509534 CADPSQ9ULU8 1353 aa28.97■■■□□ 2.23
SIL1-213ENST00000509534 PRDM2Q13029 1718 aa28.91■■■□□ 2.22
SIL1-213ENST00000509534 LAMC3Q9Y6N6 1575 aa28.89■■■□□ 2.22
SIL1-213ENST00000509534 NESP48681 1621 aa28.85■■■□□ 2.21
SIL1-213ENST00000509534 CHIC1Q5VXU3 224 aa28.69■■■□□ 2.18
SIL1-213ENST00000509534 ABCC8Q09428 1581 aa28.67■■■□□ 2.18
SIL1-213ENST00000509534 PDS5BQ9NTI5 1447 aa28.67■■■□□ 2.18
SIL1-213ENST00000509534 FANCD2Q9BXW9 1451 aa28.67■■■□□ 2.18
SIL1-213ENST00000509534 KIF21AQ7Z4S6 1674 aa28.58■■■□□ 2.17
SIL1-213ENST00000509534 CEP164Q9UPV0 1460 aa28.57■■■□□ 2.16
SIL1-213ENST00000509534 WRNQ14191 1432 aaPredicted RBP eCLIP28.56■■■□□ 2.16
SIL1-213ENST00000509534 TRIM41Q8WV44 630 aa28.52■■■□□ 2.16
SIL1-213ENST00000509534 SYNJ1O43426 1573 aa28.46■■■□□ 2.15
SIL1-213ENST00000509534 ERCC6Q03468 1493 aa28.45■■■□□ 2.15
SIL1-213ENST00000509534 CUX1P39880 1505 aa28.41■■■□□ 2.14
SIL1-213ENST00000509534 TOP2BQ02880 1626 aa28.41■■■□□ 2.14
SIL1-213ENST00000509534 BIVM-ERCC5R4GMW8 1640 aa28.4■■■□□ 2.14
SIL1-213ENST00000509534 DNMBPQ6XZF7 1577 aa28.36■■■□□ 2.13
SIL1-213ENST00000509534 MRC2Q9UBG0 1479 aa28.32■■■□□ 2.12
SIL1-213ENST00000509534 URB2Q14146 1524 aaKnown RBP28.32■■■□□ 2.12
SIL1-213ENST00000509534 TOPBP1Q92547 1522 aa28.3■■■□□ 2.12
SIL1-213ENST00000509534 THOC2Q8NI27 1593 aaKnown RBP28.22■■■□□ 2.11
SIL1-213ENST00000509534 FGD5Q6ZNL6 1462 aa28.2■■■□□ 2.1
SIL1-213ENST00000509534 WDR62O43379 1518 aa28.19■■■□□ 2.1
SIL1-213ENST00000509534 POLA1P09884 1462 aaPredicted RBP28.12■■■□□ 2.09
SIL1-213ENST00000509534 SOGA1O94964 1423 aa28.02■■■□□ 2.08
SIL1-213ENST00000509534 RAD54L2Q9Y4B4 1467 aa28■■■□□ 2.07
SIL1-213ENST00000509534 FAM9AQ8IZU1 332 aaPredicted RBP27.96■■■□□ 2.07
SIL1-213ENST00000509534 CUX2O14529 1486 aa27.95■■■□□ 2.06
SIL1-213ENST00000509534 ABCA10Q8WWZ4 1543 aa27.93■■■□□ 2.06
SIL1-213ENST00000509534 EEA1Q15075 1411 aa27.93■■■□□ 2.06
SIL1-213ENST00000509534 TARBP1Q13395 1621 aaKnown RBP27.92■■■□□ 2.06
SIL1-213ENST00000509534 WDR97A6NE52 1622 aa27.92■■■□□ 2.06
SIL1-213ENST00000509534 RUSC2Q8N2Y8 1516 aa27.91■■■□□ 2.06
SIL1-213ENST00000509534 IFT140Q96RY7 1462 aa27.9■■■□□ 2.06
SIL1-213ENST00000509534 KIF27Q86VH2 1401 aa27.89■■■□□ 2.06
SIL1-213ENST00000509534 CSRNP3Q8WYN3 585 aa27.77■■■□□ 2.04
SIL1-213ENST00000509534 ABCA5Q8WWZ7 1642 aa27.77■■■□□ 2.04
SIL1-213ENST00000509534 TDRD9Q8NDG6 1382 aaKnown RBP27.76■■■□□ 2.04
SIL1-213ENST00000509534 GAPVD1Q14C86 1478 aa27.72■■■□□ 2.03
SIL1-213ENST00000509534 ZNF608Q9ULD9 1512 aaPredicted RBP27.72■■■□□ 2.03
SIL1-213ENST00000509534 EIF4G3O43432 1585 aaKnown RBP27.68■■■□□ 2.02
SIL1-213ENST00000509534 AQRO60306 1485 aaKnown RBP eCLIP27.68■■■□□ 2.021e-12■■■■■ 28.7
SIL1-213ENST00000509534 PBRM1Q86U86 1689 aa27.66■■■□□ 2.02
SIL1-213ENST00000509534 IGF1RP08069 1367 aa27.64■■■□□ 2.02
SIL1-213ENST00000509534 ERICH3Q5RHP9 1530 aa27.62■■■□□ 2.01
SIL1-213ENST00000509534 KIF21BO75037 1637 aa27.59■■■□□ 2.01
SIL1-213ENST00000509534 GRIN2BQ13224 1484 aa27.59■■■□□ 2.01
SIL1-213ENST00000509534 CUL7Q14999 1698 aa27.58■■■□□ 2.01
SIL1-213ENST00000509534 EHMT2Q96KQ7 1210 aa27.58■■■□□ 2.01
SIL1-213ENST00000509534 LOC105371045A0A1W2PR82 267 aa27.55■■■□□ 2
SIL1-213ENST00000509534 PRXQ9BXM0 1461 aa27.55■■■□□ 2
SIL1-213ENST00000509534 CARMIL1Q5VZK9 1371 aa27.52■■■□□ 2
SIL1-213ENST00000509534 GOLGA3Q08378 1498 aa27.51■■□□□ 1.99
SIL1-213ENST00000509534 RAPGEF2Q9Y4G8 1499 aa27.48■■□□□ 1.99
SIL1-213ENST00000509534 SNAPC4Q5SXM2 1469 aa27.45■■□□□ 1.99
SIL1-213ENST00000509534 ADAMTS12P58397 1594 aa27.45■■□□□ 1.99
SIL1-213ENST00000509534 MAGI1Q96QZ7 1491 aaPredicted RBP27.42■■□□□ 1.98
SIL1-213ENST00000509534 FHAD1B1AJZ9 1412 aa27.42■■□□□ 1.98
SIL1-213ENST00000509534 UBTFP17480 764 aaKnown RBP27.4■■□□□ 1.98
SIL1-213ENST00000509534 SYNJ2O15056 1496 aa27.31■■□□□ 1.96
SIL1-213ENST00000509534 TNIKQ9UKE5 1360 aa27.3■■□□□ 1.96
SIL1-213ENST00000509534 CHMP7Q8WUX9 453 aaPredicted RBP27.26■■□□□ 1.95
SIL1-213ENST00000509534 GRIN2AQ12879 1464 aa27.24■■□□□ 1.95
SIL1-213ENST00000509534 FBLN2P98095 1184 aa27.24■■□□□ 1.95
SIL1-213ENST00000509534 CTTNBP2Q8WZ74 1663 aa27.21■■□□□ 1.95
SIL1-213ENST00000509534 CHD1O14646 1710 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms