RNA–Protein interactions for RNA: ENST00000596124.3

ELL-203, Transcript of elongation factor for RNA polymerase II, humanhuman

TSL 1 (best) BASIC

Gene ELL, Length 1,852 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL-203ENST00000596124 NISCHQ9Y2I1 1504 aa40.25■■■■■ 4.03
ELL-203ENST00000596124 CCDC180Q9P1Z9 1646 aa35.54■■■■□ 3.28
ELL-203ENST00000596124 ABCC9O60706 1549 aa34.49■■■■□ 3.11
ELL-203ENST00000596124 ZCCHC6Q5VYS8 1495 aaKnown RBP33.59■■■□□ 2.97
ELL-203ENST00000596124 DCAF8L2P0C7V8 631 aa33.53■■■□□ 2.96
ELL-203ENST00000596124 NACADO15069 1562 aa33.4■■■□□ 2.94
ELL-203ENST00000596124 MYO15BQ96JP2 1530 aa33.36■■■□□ 2.93
ELL-203ENST00000596124 DCAF1Q9Y4B6 1507 aa33.33■■■□□ 2.93
ELL-203ENST00000596124 RB1CC1Q8TDY2 1594 aa33.32■■■□□ 2.92
ELL-203ENST00000596124 UNC13AQ9UPW8 1703 aa32.49■■■□□ 2.79
ELL-203ENST00000596124 SCRIBQ14160 1630 aa32.46■■■□□ 2.79
ELL-203ENST00000596124 PABPN1Q86U42 306 aaKnown RBP eCLIP32.35■■■□□ 2.77
ELL-203ENST00000596124 BICRAQ9NZM4 1560 aa32.3■■■□□ 2.76
ELL-203ENST00000596124 SHROOM4Q9ULL8 1493 aa32.03■■■□□ 2.72
ELL-203ENST00000596124 EIF4G1Q04637 1599 aaKnown RBP31.43■■■□□ 2.62
ELL-203ENST00000596124 DNAJC5BQ9UF47 199 aa31.42■■■□□ 2.62
ELL-203ENST00000596124 CECR2Q9BXF3 1484 aa31.32■■■□□ 2.6
ELL-203ENST00000596124 CC2D2AQ9P2K1 1620 aa31.2■■■□□ 2.59
ELL-203ENST00000596124 BAZ1AQ9NRL2 1556 aaPredicted RBP31.15■■■□□ 2.58
ELL-203ENST00000596124 SMARCA4P51532 1647 aa31.11■■■□□ 2.57
ELL-203ENST00000596124 MROH2BQ7Z745 1585 aa31.01■■■□□ 2.55
ELL-203ENST00000596124 ATAD2BQ9ULI0 1458 aa30.91■■■□□ 2.54
ELL-203ENST00000596124 NCAPD3P42695 1498 aa30.87■■■□□ 2.53
ELL-203ENST00000596124 SMARCA2P51531 1590 aa30.86■■■□□ 2.53
ELL-203ENST00000596124 PEG3Q9GZU2 1588 aa30.84■■■□□ 2.53
ELL-203ENST00000596124 RSF1Q96T23 1441 aaPredicted RBP30.83■■■□□ 2.53
ELL-203ENST00000596124 HMGXB3Q12766 1538 aa30.68■■■□□ 2.5
ELL-203ENST00000596124 WIZO95785 1651 aa30.65■■■□□ 2.5
ELL-203ENST00000596124 BAZ1BQ9UIG0 1483 aaKnown RBP30.65■■■□□ 2.5
ELL-203ENST00000596124 TOP2AP11388 1531 aaKnown RBP30.37■■■□□ 2.45
ELL-203ENST00000596124 SUPT5HO00267 1087 aaKnown RBP30.32■■■□□ 2.44
ELL-203ENST00000596124 CCDC88BA6NC98 1476 aa30.05■■■□□ 2.4
ELL-203ENST00000596124 CADPSQ9ULU8 1353 aa29.99■■■□□ 2.39
ELL-203ENST00000596124 NESP48681 1621 aa29.95■■■□□ 2.39
ELL-203ENST00000596124 LAMC3Q9Y6N6 1575 aa29.93■■■□□ 2.38
ELL-203ENST00000596124 CFTRP13569 1480 aa29.87■■■□□ 2.37
ELL-203ENST00000596124 PDS5BQ9NTI5 1447 aa29.76■■■□□ 2.36
ELL-203ENST00000596124 ERCC6Q03468 1493 aa29.7■■■□□ 2.35
ELL-203ENST00000596124 FANCD2Q9BXW9 1451 aa29.6■■■□□ 2.33
ELL-203ENST00000596124 KIF21AQ7Z4S6 1674 aa29.53■■■□□ 2.32
ELL-203ENST00000596124 PRDM2Q13029 1718 aa29.52■■■□□ 2.32
ELL-203ENST00000596124 CEP164Q9UPV0 1460 aa29.51■■■□□ 2.32
ELL-203ENST00000596124 MRC2Q9UBG0 1479 aa29.4■■■□□ 2.3
ELL-203ENST00000596124 THOC2Q8NI27 1593 aaKnown RBP29.37■■■□□ 2.29
ELL-203ENST00000596124 WDR62O43379 1518 aa29.28■■■□□ 2.28
ELL-203ENST00000596124 URB2Q14146 1524 aaKnown RBP29.27■■■□□ 2.28
ELL-203ENST00000596124 CUX2O14529 1486 aa29.27■■■□□ 2.28
ELL-203ENST00000596124 ABCC8Q09428 1581 aa29.21■■■□□ 2.27
ELL-203ENST00000596124 TOPBP1Q92547 1522 aa29.16■■■□□ 2.26
ELL-203ENST00000596124 DNMBPQ6XZF7 1577 aa29.13■■■□□ 2.25
ELL-203ENST00000596124 CUX1P39880 1505 aa29.06■■■□□ 2.24
ELL-203ENST00000596124 WRNQ14191 1432 aaPredicted RBP eCLIP29.04■■■□□ 2.24
ELL-203ENST00000596124 POLA1P09884 1462 aaPredicted RBP28.95■■■□□ 2.22
ELL-203ENST00000596124 FGD5Q6ZNL6 1462 aa28.91■■■□□ 2.22
ELL-203ENST00000596124 IFT140Q96RY7 1462 aa28.9■■■□□ 2.22
ELL-203ENST00000596124 TOP2BQ02880 1626 aa28.9■■■□□ 2.22
ELL-203ENST00000596124 SYNJ1O43426 1573 aa28.89■■■□□ 2.22
ELL-203ENST00000596124 SOGA1O94964 1423 aa28.86■■■□□ 2.21
ELL-203ENST00000596124 BIVM-ERCC5R4GMW8 1640 aa28.85■■■□□ 2.21
ELL-203ENST00000596124 RAD54L2Q9Y4B4 1467 aa28.81■■■□□ 2.2
ELL-203ENST00000596124 TARBP1Q13395 1621 aaKnown RBP28.79■■■□□ 2.2
ELL-203ENST00000596124 ZNF608Q9ULD9 1512 aaPredicted RBP28.73■■■□□ 2.19
ELL-203ENST00000596124 ABCA10Q8WWZ4 1543 aa28.67■■■□□ 2.18
ELL-203ENST00000596124 TDRD9Q8NDG6 1382 aaKnown RBP28.66■■■□□ 2.18
ELL-203ENST00000596124 CHIC1Q5VXU3 224 aa28.66■■■□□ 2.18
ELL-203ENST00000596124 TRIM41Q8WV44 630 aa28.64■■■□□ 2.18
ELL-203ENST00000596124 AQRO60306 1485 aaKnown RBP eCLIP28.64■■■□□ 2.171e-6■■■■■ 28.3
ELL-203ENST00000596124 WDR97A6NE52 1622 aa28.58■■■□□ 2.17
ELL-203ENST00000596124 EIF4G3O43432 1585 aaKnown RBP28.58■■■□□ 2.16
ELL-203ENST00000596124 GAPVD1Q14C86 1478 aa28.51■■■□□ 2.16
ELL-203ENST00000596124 ABCA5Q8WWZ7 1642 aa28.47■■■□□ 2.15
ELL-203ENST00000596124 GRIN2BQ13224 1484 aa28.46■■■□□ 2.15
ELL-203ENST00000596124 KIF27Q86VH2 1401 aa28.42■■■□□ 2.14
ELL-203ENST00000596124 MAGI1Q96QZ7 1491 aaPredicted RBP28.34■■■□□ 2.13
ELL-203ENST00000596124 SNAPC4Q5SXM2 1469 aa28.34■■■□□ 2.13
ELL-203ENST00000596124 ERICH3Q5RHP9 1530 aa28.32■■■□□ 2.12
ELL-203ENST00000596124 PBRM1Q86U86 1689 aa28.31■■■□□ 2.12
ELL-203ENST00000596124 IGF1RP08069 1367 aa28.3■■■□□ 2.12
ELL-203ENST00000596124 CHMP7Q8WUX9 453 aaPredicted RBP28.25■■■□□ 2.11
ELL-203ENST00000596124 RUSC2Q8N2Y8 1516 aa28.24■■■□□ 2.11
ELL-203ENST00000596124 FBLN2P98095 1184 aa28.24■■■□□ 2.11
ELL-203ENST00000596124 SYNJ2O15056 1496 aa28.23■■■□□ 2.11
ELL-203ENST00000596124 OSCARQ8IYS5 282 aa28.21■■■□□ 2.11
ELL-203ENST00000596124 FHAD1B1AJZ9 1412 aa28.21■■■□□ 2.11
ELL-203ENST00000596124 ADAMTS12P58397 1594 aa28.16■■■□□ 2.1
ELL-203ENST00000596124 CARMIL1Q5VZK9 1371 aa28.12■■■□□ 2.09
ELL-203ENST00000596124 EEA1Q15075 1411 aa28.11■■■□□ 2.09
ELL-203ENST00000596124 CHD1O14646 1710 aa28.11■■■□□ 2.09
ELL-203ENST00000596124 GRIN2AQ12879 1464 aa28.08■■■□□ 2.09
ELL-203ENST00000596124 CUL7Q14999 1698 aa28.08■■■□□ 2.09
ELL-203ENST00000596124 CSRNP3Q8WYN3 585 aa28.07■■■□□ 2.08
ELL-203ENST00000596124 DNAJC5Q9H3Z4 198 aa28.04■■■□□ 2.08
ELL-203ENST00000596124 FAM9AQ8IZU1 332 aaPredicted RBP28■■■□□ 2.07
ELL-203ENST00000596124 NUP160Q12769 1436 aa27.97■■■□□ 2.07
ELL-203ENST00000596124 PRXQ9BXM0 1461 aa27.97■■■□□ 2.07
ELL-203ENST00000596124 RAPGEF2Q9Y4G8 1499 aa27.96■■■□□ 2.07
ELL-203ENST00000596124 CEP170Q5SW79 1584 aa27.89■■■□□ 2.06
ELL-203ENST00000596124 CLASP1Q7Z460 1538 aa27.87■■■□□ 2.05
ELL-203ENST00000596124 KIAA0586Q9BVV6 1533 aa27.8■■■□□ 2.04
ELL-203ENST00000596124 JPH4Q96JJ6 628 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms