Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC28.73■■■□□ 2.19
FOXN1O15353 AL121749.1-202ENST00000609313 2153 ntBASIC28.73■■■□□ 2.19
FOXN1O15353 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
FOXN1O15353 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
FOXN1O15353 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC28.72■■■□□ 2.19
FOXN1O15353 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC28.72■■■□□ 2.19
FOXN1O15353 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC28.72■■■□□ 2.19
FOXN1O15353 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
FOXN1O15353 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
FOXN1O15353 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC28.71■■■□□ 2.19
FOXN1O15353 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC28.71■■■□□ 2.19
FOXN1O15353 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
FOXN1O15353 AL117332.1-201ENST00000622628 974 ntBASIC28.71■■■□□ 2.19
FOXN1O15353 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC28.71■■■□□ 2.19
FOXN1O15353 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.7■■■□□ 2.19
FOXN1O15353 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
FOXN1O15353 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC28.7■■■□□ 2.18
FOXN1O15353 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
FOXN1O15353 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC28.69■■■□□ 2.18
FOXN1O15353 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
FOXN1O15353 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
FOXN1O15353 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
FOXN1O15353 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
FOXN1O15353 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC28.68■■■□□ 2.18
FOXN1O15353 AC142381.2-201ENST00000566120 298 ntBASIC28.68■■■□□ 2.18
FOXN1O15353 ANKRD20A6P-201ENST00000618763 204 ntBASIC28.68■■■□□ 2.18
FOXN1O15353 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC28.68■■■□□ 2.18
FOXN1O15353 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
FOXN1O15353 BX255925.1-201ENST00000566954 1854 ntBASIC28.68■■■□□ 2.18
FOXN1O15353 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.67■■■□□ 2.18
FOXN1O15353 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
FOXN1O15353 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC28.67■■■□□ 2.18
FOXN1O15353 MIR4466-201ENST00000606121 54 ntBASIC28.67■■■□□ 2.18
FOXN1O15353 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
FOXN1O15353 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
FOXN1O15353 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
FOXN1O15353 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC28.66■■■□□ 2.18
FOXN1O15353 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
FOXN1O15353 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
FOXN1O15353 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
FOXN1O15353 MIR3621-201ENST00000580529 85 ntBASIC28.65■■■□□ 2.18
FOXN1O15353 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
FOXN1O15353 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
FOXN1O15353 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC28.64■■■□□ 2.18
FOXN1O15353 TK2-202ENST00000417693 1046 ntTSL 2 BASIC28.64■■■□□ 2.18
FOXN1O15353 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
FOXN1O15353 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
FOXN1O15353 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
FOXN1O15353 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
FOXN1O15353 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC28.63■■■□□ 2.17
FOXN1O15353 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC28.63■■■□□ 2.17
FOXN1O15353 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC28.63■■■□□ 2.17
FOXN1O15353 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.63■■■□□ 2.17
FOXN1O15353 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC28.63■■■□□ 2.17
FOXN1O15353 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
FOXN1O15353 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
FOXN1O15353 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC28.62■■■□□ 2.17
FOXN1O15353 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
FOXN1O15353 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC28.62■■■□□ 2.17
FOXN1O15353 LINC01003-201ENST00000564834 1764 ntBASIC28.61■■■□□ 2.17
FOXN1O15353 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
FOXN1O15353 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
FOXN1O15353 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
FOXN1O15353 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
FOXN1O15353 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC28.61■■■□□ 2.17
FOXN1O15353 AC021242.3-201ENST00000607598 1377 ntBASIC28.61■■■□□ 2.17
FOXN1O15353 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC28.6■■■□□ 2.17
FOXN1O15353 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
FOXN1O15353 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
FOXN1O15353 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC28.6■■■□□ 2.17
FOXN1O15353 AC137630.3-201ENST00000607245 391 ntBASIC28.6■■■□□ 2.17
FOXN1O15353 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
FOXN1O15353 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC28.6■■■□□ 2.17
FOXN1O15353 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
FOXN1O15353 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
FOXN1O15353 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
FOXN1O15353 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
FOXN1O15353 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC28.58■■■□□ 2.17
FOXN1O15353 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.16
FOXN1O15353 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
FOXN1O15353 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
FOXN1O15353 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
FOXN1O15353 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
FOXN1O15353 GLI3-203ENST00000437480 451 ntTSL 2 BASIC28.57■■■□□ 2.16
FOXN1O15353 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC28.57■■■□□ 2.16
FOXN1O15353 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
FOXN1O15353 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
FOXN1O15353 AC092028.1-203ENST00000608262 953 ntBASIC28.57■■■□□ 2.16
FOXN1O15353 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
FOXN1O15353 AC106739.1-201ENST00000617035 715 ntBASIC28.57■■■□□ 2.16
FOXN1O15353 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
FOXN1O15353 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
FOXN1O15353 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
FOXN1O15353 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC28.56■■■□□ 2.16
FOXN1O15353 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC28.55■■■□□ 2.16
FOXN1O15353 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
FOXN1O15353 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
FOXN1O15353 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
FOXN1O15353 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
FOXN1O15353 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms