RNA–Protein interactions for RNA: ENST00000352222.7

HTRA2-202, Transcript of HtrA serine peptidase 2, humanhuman

TSL 1 (best) BASIC

Gene HTRA2, Length 1,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA2-202ENST00000352222 NISCHQ9Y2I1 1504 aa56.89■■■■■ 6.7
HTRA2-202ENST00000352222 CCDC180Q9P1Z9 1646 aa50.62■■■■■ 5.69
HTRA2-202ENST00000352222 ABCC9O60706 1549 aa49.78■■■■■ 5.56
HTRA2-202ENST00000352222 RB1CC1Q8TDY2 1594 aa47.74■■■■■ 5.23
HTRA2-202ENST00000352222 DCAF8L2P0C7V8 631 aa47.73■■■■■ 5.23
HTRA2-202ENST00000352222 NACADO15069 1562 aa47.63■■■■■ 5.21
HTRA2-202ENST00000352222 ZCCHC6Q5VYS8 1495 aaKnown RBP47.34■■■■■ 5.17
HTRA2-202ENST00000352222 MYO15BQ96JP2 1530 aa47.21■■■■■ 5.15
HTRA2-202ENST00000352222 DCAF1Q9Y4B6 1507 aa46.98■■■■■ 5.11
HTRA2-202ENST00000352222 UNC13AQ9UPW8 1703 aa46.72■■■■■ 5.07
HTRA2-202ENST00000352222 PABPN1Q86U42 306 aaKnown RBP eCLIP46.52■■■■■ 5.04
HTRA2-202ENST00000352222 BICRAQ9NZM4 1560 aa46.32■■■■■ 5.01
HTRA2-202ENST00000352222 SCRIBQ14160 1630 aa46.28■■■■■ 5
HTRA2-202ENST00000352222 DNAJC5BQ9UF47 199 aa45.82■■■■■ 4.93
HTRA2-202ENST00000352222 SHROOM4Q9ULL8 1493 aa45.7■■■■■ 4.91
HTRA2-202ENST00000352222 EIF4G1Q04637 1599 aaKnown RBP45.11■■■■■ 4.81
HTRA2-202ENST00000352222 CC2D2AQ9P2K1 1620 aa44.99■■■■■ 4.79
HTRA2-202ENST00000352222 CECR2Q9BXF3 1484 aa44.7■■■■■ 4.75
HTRA2-202ENST00000352222 SMARCA4P51532 1647 aa44.19■■■■■ 4.67
HTRA2-202ENST00000352222 BAZ1AQ9NRL2 1556 aaPredicted RBP44.09■■■■■ 4.65
HTRA2-202ENST00000352222 ATAD2BQ9ULI0 1458 aa43.98■■■■■ 4.63
HTRA2-202ENST00000352222 NCAPD3P42695 1498 aa43.94■■■■■ 4.62
HTRA2-202ENST00000352222 SMARCA2P51531 1590 aa43.9■■■■■ 4.62
HTRA2-202ENST00000352222 MROH2BQ7Z745 1585 aa43.88■■■■■ 4.62
HTRA2-202ENST00000352222 HMGXB3Q12766 1538 aa43.71■■■■■ 4.59
HTRA2-202ENST00000352222 PEG3Q9GZU2 1588 aa43.69■■■■■ 4.59
HTRA2-202ENST00000352222 BAZ1BQ9UIG0 1483 aaKnown RBP43.63■■■■■ 4.57
HTRA2-202ENST00000352222 WIZO95785 1651 aa43.43■■■■■ 4.54
HTRA2-202ENST00000352222 RSF1Q96T23 1441 aaPredicted RBP43.3■■■■■ 4.52
HTRA2-202ENST00000352222 NESP48681 1621 aa43.03■■■■■ 4.48
HTRA2-202ENST00000352222 ERCC6Q03468 1493 aa42.9■■■■■ 4.46
HTRA2-202ENST00000352222 TOP2AP11388 1531 aaKnown RBP42.9■■■■■ 4.46
HTRA2-202ENST00000352222 LAMC3Q9Y6N6 1575 aa42.82■■■■■ 4.45
HTRA2-202ENST00000352222 CADPSQ9ULU8 1353 aa42.67■■■■■ 4.42
HTRA2-202ENST00000352222 PDS5BQ9NTI5 1447 aa42.54■■■■■ 4.4
HTRA2-202ENST00000352222 KIF21AQ7Z4S6 1674 aa42.52■■■■■ 4.4
HTRA2-202ENST00000352222 CCDC88BA6NC98 1476 aa42.42■■■■■ 4.38
HTRA2-202ENST00000352222 CUX2O14529 1486 aa42.42■■■■■ 4.38
HTRA2-202ENST00000352222 CFTRP13569 1480 aa42.38■■■■■ 4.38
HTRA2-202ENST00000352222 THOC2Q8NI27 1593 aaKnown RBP42.36■■■■■ 4.37
HTRA2-202ENST00000352222 FANCD2Q9BXW9 1451 aa42.22■■■■■ 4.35
HTRA2-202ENST00000352222 SUPT5HO00267 1087 aaKnown RBP42.2■■■■■ 4.35
HTRA2-202ENST00000352222 CEP164Q9UPV0 1460 aa42.17■■■■■ 4.34
HTRA2-202ENST00000352222 MRC2Q9UBG0 1479 aa42.13■■■■■ 4.34
HTRA2-202ENST00000352222 PRDM2Q13029 1718 aa42.09■■■■■ 4.33
HTRA2-202ENST00000352222 WDR62O43379 1518 aa41.99■■■■■ 4.31
HTRA2-202ENST00000352222 URB2Q14146 1524 aaKnown RBP41.82■■■■■ 4.28
HTRA2-202ENST00000352222 TOPBP1Q92547 1522 aa41.53■■■■■ 4.24
HTRA2-202ENST00000352222 ABCC8Q09428 1581 aa41.45■■■■■ 4.23
HTRA2-202ENST00000352222 DNMBPQ6XZF7 1577 aa41.45■■■■■ 4.23
HTRA2-202ENST00000352222 DNAJC5Q9H3Z4 198 aa41.34■■■■■ 4.21
HTRA2-202ENST00000352222 IFT140Q96RY7 1462 aa41.28■■■■■ 4.2
HTRA2-202ENST00000352222 CUX1P39880 1505 aa41.17■■■■■ 4.18
HTRA2-202ENST00000352222 ZNF608Q9ULD9 1512 aaPredicted RBP41.17■■■■■ 4.18
HTRA2-202ENST00000352222 POLA1P09884 1462 aaPredicted RBP41.16■■■■■ 4.18
HTRA2-202ENST00000352222 TARBP1Q13395 1621 aaKnown RBP41.07■■■■■ 4.17
HTRA2-202ENST00000352222 FGD5Q6ZNL6 1462 aa41.06■■■■■ 4.16
HTRA2-202ENST00000352222 RAD54L2Q9Y4B4 1467 aa41.03■■■■■ 4.16
HTRA2-202ENST00000352222 SOGA1O94964 1423 aa41■■■■■ 4.15
HTRA2-202ENST00000352222 EIF4G3O43432 1585 aaKnown RBP40.98■■■■■ 4.15
HTRA2-202ENST00000352222 AQRO60306 1485 aaKnown RBP eCLIP40.91■■■■■ 4.142e-9■■■■□ 21.4
HTRA2-202ENST00000352222 WRNQ14191 1432 aaPredicted RBP eCLIP40.84■■■■■ 4.13
HTRA2-202ENST00000352222 TDRD9Q8NDG6 1382 aaKnown RBP40.81■■■■■ 4.12
HTRA2-202ENST00000352222 SYNJ1O43426 1573 aa40.77■■■■■ 4.12
HTRA2-202ENST00000352222 TOP2BQ02880 1626 aa40.75■■■■■ 4.11
HTRA2-202ENST00000352222 BIVM-ERCC5R4GMW8 1640 aa40.75■■■■■ 4.11
HTRA2-202ENST00000352222 WDR97A6NE52 1622 aa40.71■■■■■ 4.11
HTRA2-202ENST00000352222 OSCARQ8IYS5 282 aa40.69■■■■■ 4.1
HTRA2-202ENST00000352222 ABCA10Q8WWZ4 1543 aa40.61■■■■■ 4.09
HTRA2-202ENST00000352222 CHD1O14646 1710 aa40.53■■■■■ 4.08
HTRA2-202ENST00000352222 SNAPC4Q5SXM2 1469 aa40.52■■■■■ 4.08
HTRA2-202ENST00000352222 GRIN2BQ13224 1484 aa40.51■■■■■ 4.08
HTRA2-202ENST00000352222 GAPVD1Q14C86 1478 aa40.51■■■■■ 4.08
HTRA2-202ENST00000352222 FBLN2P98095 1184 aa40.5■■■■■ 4.07
HTRA2-202ENST00000352222 ABCA5Q8WWZ7 1642 aa40.48■■■■■ 4.07
HTRA2-202ENST00000352222 PBRM1Q86U86 1689 aa40.47■■■■■ 4.07
HTRA2-202ENST00000352222 MAGI1Q96QZ7 1491 aaPredicted RBP40.41■■■■■ 4.06
HTRA2-202ENST00000352222 CHMP7Q8WUX9 453 aaPredicted RBP40.32■■■■■ 4.04
HTRA2-202ENST00000352222 SYNJ2O15056 1496 aa40.27■■■■■ 4.04
HTRA2-202ENST00000352222 ADAMTS12P58397 1594 aa40.12■■■■■ 4.01
HTRA2-202ENST00000352222 ERICH3Q5RHP9 1530 aa40.11■■■■■ 4.01
HTRA2-202ENST00000352222 RIMBP3CA6NJZ7 1639 aa40.08■■■■■ 4.01
HTRA2-202ENST00000352222 RIMBP3BA6NNM3 1639 aa40.08■■■■■ 4.01
HTRA2-202ENST00000352222 RIMBP3Q9UFD9 1639 aa40.08■■■■■ 4.01
HTRA2-202ENST00000352222 TRIM41Q8WV44 630 aa40.03■■■■■ 4
HTRA2-202ENST00000352222 ARHGEF11O15085 1522 aa40.03■■■■■ 4
HTRA2-202ENST00000352222 FHAD1B1AJZ9 1412 aa40.02■■■■■ 4
HTRA2-202ENST00000352222 CLASP1Q7Z460 1538 aa40.02■■■■■ 4
HTRA2-202ENST00000352222 GRIN2AQ12879 1464 aa40.01■■■■□ 3.99
HTRA2-202ENST00000352222 KIF27Q86VH2 1401 aa39.99■■■■□ 3.99
HTRA2-202ENST00000352222 IGF1RP08069 1367 aa39.84■■■■□ 3.97
HTRA2-202ENST00000352222 CEP170Q5SW79 1584 aa39.84■■■■□ 3.97
HTRA2-202ENST00000352222 NUP160Q12769 1436 aa39.81■■■■□ 3.96
HTRA2-202ENST00000352222 CUL7Q14999 1698 aa39.74■■■■□ 3.95
HTRA2-202ENST00000352222 CYB5RLQ6IPT4 315 aa39.73■■■■□ 3.95
HTRA2-202ENST00000352222 ARAP1Q96P48 1450 aa39.71■■■■□ 3.95
HTRA2-202ENST00000352222 RUSC2Q8N2Y8 1516 aa39.65■■■■□ 3.94
HTRA2-202ENST00000352222 CARMIL1Q5VZK9 1371 aa39.61■■■■□ 3.93
HTRA2-202ENST00000352222 SHROOM2Q13796 1616 aa39.53■■■■□ 3.92
HTRA2-202ENST00000352222 ERCC6L2Q5T890 1561 aa39.52■■■■□ 3.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms