RNA–Protein interactions for RNA: ENST00000372638.3

CITED4-201, Transcript of Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4, humanhuman

APPRIS P1 BASIC

Gene CITED4, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4-201ENST00000372638 NISCHQ9Y2I1 1504 aa57.2■■■■■ 6.75
CITED4-201ENST00000372638 CCDC180Q9P1Z9 1646 aa50.85■■■■■ 5.73
CITED4-201ENST00000372638 ABCC9O60706 1549 aa49.85■■■■■ 5.57
CITED4-201ENST00000372638 RB1CC1Q8TDY2 1594 aa47.92■■■■■ 5.26
CITED4-201ENST00000372638 DCAF8L2P0C7V8 631 aa47.92■■■■■ 5.26
CITED4-201ENST00000372638 NACADO15069 1562 aa47.87■■■■■ 5.25
CITED4-201ENST00000372638 ZCCHC6Q5VYS8 1495 aaKnown RBP47.61■■■■■ 5.21
CITED4-201ENST00000372638 MYO15BQ96JP2 1530 aa47.55■■■■■ 5.2
CITED4-201ENST00000372638 DCAF1Q9Y4B6 1507 aa47.32■■■■■ 5.17
CITED4-201ENST00000372638 UNC13AQ9UPW8 1703 aa46.79■■■■■ 5.08
CITED4-201ENST00000372638 PABPN1Q86U42 306 aaKnown RBP eCLIP46.6■■■■■ 5.05
CITED4-201ENST00000372638 BICRAQ9NZM4 1560 aa46.44■■■■■ 5.03
CITED4-201ENST00000372638 SCRIBQ14160 1630 aa46.39■■■■■ 5.02
CITED4-201ENST00000372638 SHROOM4Q9ULL8 1493 aa45.96■■■■■ 4.95
CITED4-201ENST00000372638 DNAJC5BQ9UF47 199 aa45.94■■■■■ 4.94
CITED4-201ENST00000372638 EIF4G1Q04637 1599 aaKnown RBP45.24■■■■■ 4.83
CITED4-201ENST00000372638 CC2D2AQ9P2K1 1620 aa45.07■■■■■ 4.8
CITED4-201ENST00000372638 CECR2Q9BXF3 1484 aa44.8■■■■■ 4.76
CITED4-201ENST00000372638 SMARCA4P51532 1647 aa44.38■■■■■ 4.69
CITED4-201ENST00000372638 BAZ1AQ9NRL2 1556 aaPredicted RBP44.34■■■■■ 4.69
CITED4-201ENST00000372638 NCAPD3P42695 1498 aa44.18■■■■■ 4.66
CITED4-201ENST00000372638 ATAD2BQ9ULI0 1458 aa44.18■■■■■ 4.66
CITED4-201ENST00000372638 SMARCA2P51531 1590 aa44.13■■■■■ 4.65
CITED4-201ENST00000372638 MROH2BQ7Z745 1585 aa44.07■■■■■ 4.65
CITED4-201ENST00000372638 PEG3Q9GZU2 1588 aa43.95■■■■■ 4.63
CITED4-201ENST00000372638 HMGXB3Q12766 1538 aa43.92■■■■■ 4.62
CITED4-201ENST00000372638 BAZ1BQ9UIG0 1483 aaKnown RBP43.82■■■■■ 4.61
CITED4-201ENST00000372638 WIZO95785 1651 aa43.59■■■■■ 4.57
CITED4-201ENST00000372638 RSF1Q96T23 1441 aaPredicted RBP43.57■■■■■ 4.57
CITED4-201ENST00000372638 TOP2AP11388 1531 aaKnown RBP43.12■■■■■ 4.49
CITED4-201ENST00000372638 NESP48681 1621 aa43.1■■■■■ 4.49
CITED4-201ENST00000372638 LAMC3Q9Y6N6 1575 aa43■■■■■ 4.47
CITED4-201ENST00000372638 ERCC6Q03468 1493 aa42.99■■■■■ 4.47
CITED4-201ENST00000372638 CADPSQ9ULU8 1353 aa42.9■■■■■ 4.46
CITED4-201ENST00000372638 PDS5BQ9NTI5 1447 aa42.76■■■■■ 4.44
CITED4-201ENST00000372638 CCDC88BA6NC98 1476 aa42.65■■■■■ 4.42
CITED4-201ENST00000372638 CFTRP13569 1480 aa42.61■■■■■ 4.41
CITED4-201ENST00000372638 KIF21AQ7Z4S6 1674 aa42.57■■■■■ 4.41
CITED4-201ENST00000372638 CUX2O14529 1486 aa42.54■■■■■ 4.4
CITED4-201ENST00000372638 SUPT5HO00267 1087 aaKnown RBP42.49■■■■■ 4.39
CITED4-201ENST00000372638 THOC2Q8NI27 1593 aaKnown RBP42.42■■■■■ 4.38
CITED4-201ENST00000372638 FANCD2Q9BXW9 1451 aa42.38■■■■■ 4.37
CITED4-201ENST00000372638 DNAJC5Q9H3Z4 198 aa42.37■■■■■ 4.37
CITED4-201ENST00000372638 CEP164Q9UPV0 1460 aa42.33■■■■■ 4.37
CITED4-201ENST00000372638 MRC2Q9UBG0 1479 aa42.28■■■■■ 4.36
CITED4-201ENST00000372638 PRDM2Q13029 1718 aa42.24■■■■■ 4.35
CITED4-201ENST00000372638 WDR62O43379 1518 aa42.12■■■■■ 4.33
CITED4-201ENST00000372638 URB2Q14146 1524 aaKnown RBP41.94■■■■■ 4.3
CITED4-201ENST00000372638 ABCC8Q09428 1581 aa41.74■■■■■ 4.27
CITED4-201ENST00000372638 TOPBP1Q92547 1522 aa41.7■■■■■ 4.27
CITED4-201ENST00000372638 DNMBPQ6XZF7 1577 aa41.63■■■■■ 4.25
CITED4-201ENST00000372638 IFT140Q96RY7 1462 aa41.46■■■■■ 4.23
CITED4-201ENST00000372638 CUX1P39880 1505 aa41.34■■■■■ 4.21
CITED4-201ENST00000372638 POLA1P09884 1462 aaPredicted RBP41.33■■■■■ 4.21
CITED4-201ENST00000372638 ZNF608Q9ULD9 1512 aaPredicted RBP41.25■■■■■ 4.19
CITED4-201ENST00000372638 FGD5Q6ZNL6 1462 aa41.23■■■■■ 4.19
CITED4-201ENST00000372638 TARBP1Q13395 1621 aaKnown RBP41.22■■■■■ 4.19
CITED4-201ENST00000372638 SOGA1O94964 1423 aa41.21■■■■■ 4.19
CITED4-201ENST00000372638 RAD54L2Q9Y4B4 1467 aa41.17■■■■■ 4.18
CITED4-201ENST00000372638 WRNQ14191 1432 aaPredicted RBP eCLIP41.09■■■■■ 4.17
CITED4-201ENST00000372638 EIF4G3O43432 1585 aaKnown RBP41.06■■■■■ 4.16
CITED4-201ENST00000372638 AQRO60306 1485 aaKnown RBP eCLIP41.04■■■■■ 4.16
CITED4-201ENST00000372638 TDRD9Q8NDG6 1382 aaKnown RBP40.98■■■■■ 4.15
CITED4-201ENST00000372638 TOP2BQ02880 1626 aa40.97■■■■■ 4.15
CITED4-201ENST00000372638 BIVM-ERCC5R4GMW8 1640 aa40.96■■■■■ 4.15
CITED4-201ENST00000372638 SYNJ1O43426 1573 aa40.94■■■■■ 4.14
CITED4-201ENST00000372638 WDR97A6NE52 1622 aa40.91■■■■■ 4.14
CITED4-201ENST00000372638 OSCARQ8IYS5 282 aa40.85■■■■■ 4.13
CITED4-201ENST00000372638 ABCA10Q8WWZ4 1543 aa40.83■■■■■ 4.13
CITED4-201ENST00000372638 GRIN2BQ13224 1484 aa40.72■■■■■ 4.11
CITED4-201ENST00000372638 GAPVD1Q14C86 1478 aa40.71■■■■■ 4.11
CITED4-201ENST00000372638 TRIM41Q8WV44 630 aa40.7■■■■■ 4.11
CITED4-201ENST00000372638 ABCA5Q8WWZ7 1642 aa40.63■■■■■ 4.1
CITED4-201ENST00000372638 SNAPC4Q5SXM2 1469 aa40.63■■■■■ 4.1
CITED4-201ENST00000372638 FBLN2P98095 1184 aa40.62■■■■■ 4.09
CITED4-201ENST00000372638 MAGI1Q96QZ7 1491 aaPredicted RBP40.6■■■■■ 4.09
CITED4-201ENST00000372638 PBRM1Q86U86 1689 aa40.57■■■■■ 4.09
CITED4-201ENST00000372638 CHD1O14646 1710 aa40.57■■■■■ 4.08
CITED4-201ENST00000372638 CHMP7Q8WUX9 453 aaPredicted RBP40.5■■■■■ 4.07
CITED4-201ENST00000372638 SYNJ2O15056 1496 aa40.44■■■■■ 4.06
CITED4-201ENST00000372638 ERICH3Q5RHP9 1530 aa40.34■■■■■ 4.05
CITED4-201ENST00000372638 KIF27Q86VH2 1401 aa40.27■■■■■ 4.04
CITED4-201ENST00000372638 ADAMTS12P58397 1594 aa40.25■■■■■ 4.03
CITED4-201ENST00000372638 FHAD1B1AJZ9 1412 aa40.24■■■■■ 4.03
CITED4-201ENST00000372638 GRIN2AQ12879 1464 aa40.17■■■■■ 4.02
CITED4-201ENST00000372638 CLASP1Q7Z460 1538 aa40.12■■■■■ 4.01
CITED4-201ENST00000372638 IGF1RP08069 1367 aa40.11■■■■■ 4.01
CITED4-201ENST00000372638 ARHGEF11O15085 1522 aa40.1■■■■■ 4.01
CITED4-201ENST00000372638 RIMBP3CA6NJZ7 1639 aa40.09■■■■■ 4.01
CITED4-201ENST00000372638 RIMBP3BA6NNM3 1639 aa40.09■■■■■ 4.01
CITED4-201ENST00000372638 RIMBP3Q9UFD9 1639 aa40.09■■■■■ 4.01
CITED4-201ENST00000372638 NUP160Q12769 1436 aa40■■■■□ 3.99
CITED4-201ENST00000372638 CUL7Q14999 1698 aa39.95■■■■□ 3.99
CITED4-201ENST00000372638 CEP170Q5SW79 1584 aa39.95■■■■□ 3.99
CITED4-201ENST00000372638 CARMIL1Q5VZK9 1371 aa39.88■■■■□ 3.97
CITED4-201ENST00000372638 RUSC2Q8N2Y8 1516 aa39.84■■■■□ 3.97
CITED4-201ENST00000372638 CYB5RLQ6IPT4 315 aa39.81■■■■□ 3.96
CITED4-201ENST00000372638 ARAP1Q96P48 1450 aa39.76■■■■□ 3.96
CITED4-201ENST00000372638 SHROOM2Q13796 1616 aa39.68■■■■□ 3.94
CITED4-201ENST00000372638 JPH4Q96JJ6 628 aa39.66■■■■□ 3.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms