RNA–Protein interactions for RNA: ENST00000335766.2

CDKN2D-201, Transcript of cyclin dependent kinase inhibitor 2D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN2D, Length 1,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2D-201ENST00000335766 NISCHQ9Y2I1 1504 aa55.46■■■■■ 6.47
CDKN2D-201ENST00000335766 CCDC180Q9P1Z9 1646 aa49.71■■■■■ 5.55
CDKN2D-201ENST00000335766 ABCC9O60706 1549 aa49.5■■■■■ 5.51
CDKN2D-201ENST00000335766 RB1CC1Q8TDY2 1594 aa47.24■■■■■ 5.15
CDKN2D-201ENST00000335766 NACADO15069 1562 aa47■■■■■ 5.11
CDKN2D-201ENST00000335766 DCAF8L2P0C7V8 631 aa46.54■■■■■ 5.04
CDKN2D-201ENST00000335766 MYO15BQ96JP2 1530 aa46.51■■■■■ 5.04
CDKN2D-201ENST00000335766 DNAJC5BQ9UF47 199 aa46.39■■■■■ 5.02
CDKN2D-201ENST00000335766 PABPN1Q86U42 306 aaKnown RBP eCLIP46.08■■■■■ 4.97
CDKN2D-201ENST00000335766 UNC13AQ9UPW8 1703 aa46.05■■■■■ 4.96
CDKN2D-201ENST00000335766 ZCCHC6Q5VYS8 1495 aaKnown RBP46■■■■■ 4.95
CDKN2D-201ENST00000335766 DCAF1Q9Y4B6 1507 aa45.93■■■■■ 4.94
CDKN2D-201ENST00000335766 BICRAQ9NZM4 1560 aa45.88■■■■■ 4.94
CDKN2D-201ENST00000335766 SHROOM4Q9ULL8 1493 aa45.42■■■■■ 4.86
CDKN2D-201ENST00000335766 SCRIBQ14160 1630 aa45.17■■■■■ 4.82
CDKN2D-201ENST00000335766 CC2D2AQ9P2K1 1620 aa44.75■■■■■ 4.75
CDKN2D-201ENST00000335766 EIF4G1Q04637 1599 aaKnown RBP44.73■■■■■ 4.75
CDKN2D-201ENST00000335766 CECR2Q9BXF3 1484 aa44.64■■■■■ 4.74
CDKN2D-201ENST00000335766 NCAPD3P42695 1498 aa43.44■■■■■ 4.54
CDKN2D-201ENST00000335766 ATAD2BQ9ULI0 1458 aa43.26■■■■■ 4.52
CDKN2D-201ENST00000335766 SMARCA4P51532 1647 aa43.19■■■■■ 4.51
CDKN2D-201ENST00000335766 SMARCA2P51531 1590 aa43.14■■■■■ 4.5
CDKN2D-201ENST00000335766 HMGXB3Q12766 1538 aa43.09■■■■■ 4.49
CDKN2D-201ENST00000335766 BAZ1AQ9NRL2 1556 aaPredicted RBP43.03■■■■■ 4.48
CDKN2D-201ENST00000335766 PEG3Q9GZU2 1588 aa42.89■■■■■ 4.46
CDKN2D-201ENST00000335766 BAZ1BQ9UIG0 1483 aaKnown RBP42.8■■■■■ 4.44
CDKN2D-201ENST00000335766 CUX2O14529 1486 aa42.74■■■■■ 4.43
CDKN2D-201ENST00000335766 ERCC6Q03468 1493 aa42.72■■■■■ 4.43
CDKN2D-201ENST00000335766 MROH2BQ7Z745 1585 aa42.69■■■■■ 4.43
CDKN2D-201ENST00000335766 DNAJC5Q9H3Z4 198 aa42.57■■■■■ 4.41
CDKN2D-201ENST00000335766 NESP48681 1621 aa42.57■■■■■ 4.4
CDKN2D-201ENST00000335766 LAMC3Q9Y6N6 1575 aa42.37■■■■■ 4.37
CDKN2D-201ENST00000335766 THOC2Q8NI27 1593 aaKnown RBP42.16■■■■■ 4.34
CDKN2D-201ENST00000335766 PDS5BQ9NTI5 1447 aa42.13■■■■■ 4.34
CDKN2D-201ENST00000335766 WIZO95785 1651 aa42.11■■■■■ 4.33
CDKN2D-201ENST00000335766 CADPSQ9ULU8 1353 aa42.08■■■■■ 4.33
CDKN2D-201ENST00000335766 KIF21AQ7Z4S6 1674 aa41.97■■■■■ 4.31
CDKN2D-201ENST00000335766 RSF1Q96T23 1441 aaPredicted RBP41.89■■■■■ 4.3
CDKN2D-201ENST00000335766 MRC2Q9UBG0 1479 aa41.73■■■■■ 4.27
CDKN2D-201ENST00000335766 TOP2AP11388 1531 aaKnown RBP41.69■■■■■ 4.26
CDKN2D-201ENST00000335766 WDR62O43379 1518 aa41.65■■■■■ 4.26
CDKN2D-201ENST00000335766 CFTRP13569 1480 aa41.64■■■■■ 4.26
CDKN2D-201ENST00000335766 CEP164Q9UPV0 1460 aa41.57■■■■■ 4.25
CDKN2D-201ENST00000335766 FANCD2Q9BXW9 1451 aa41.54■■■■■ 4.24
CDKN2D-201ENST00000335766 CCDC88BA6NC98 1476 aa41.21■■■■■ 4.19
CDKN2D-201ENST00000335766 URB2Q14146 1524 aaKnown RBP41.2■■■■■ 4.19
CDKN2D-201ENST00000335766 PRDM2Q13029 1718 aa41.07■■■■■ 4.17
CDKN2D-201ENST00000335766 IFT140Q96RY7 1462 aa40.78■■■■■ 4.12
CDKN2D-201ENST00000335766 TOPBP1Q92547 1522 aa40.77■■■■■ 4.12
CDKN2D-201ENST00000335766 ABCC8Q09428 1581 aa40.76■■■■■ 4.12
CDKN2D-201ENST00000335766 OSCARQ8IYS5 282 aa40.75■■■■■ 4.11
CDKN2D-201ENST00000335766 ZNF608Q9ULD9 1512 aaPredicted RBP40.65■■■■■ 4.1
CDKN2D-201ENST00000335766 DNMBPQ6XZF7 1577 aa40.64■■■■■ 4.1
CDKN2D-201ENST00000335766 TRIM41Q8WV44 630 aa40.56■■■■■ 4.08
CDKN2D-201ENST00000335766 TARBP1Q13395 1621 aaKnown RBP40.42■■■■■ 4.06
CDKN2D-201ENST00000335766 EIF4G3O43432 1585 aaKnown RBP40.41■■■■■ 4.06
CDKN2D-201ENST00000335766 POLA1P09884 1462 aaPredicted RBP40.38■■■■■ 4.05
CDKN2D-201ENST00000335766 AQRO60306 1485 aaKnown RBP eCLIP40.29■■■■■ 4.044e-6■■■■□ 20.2
CDKN2D-201ENST00000335766 SOGA1O94964 1423 aa40.18■■■■■ 4.02
CDKN2D-201ENST00000335766 RAD54L2Q9Y4B4 1467 aa40.17■■■■■ 4.02
CDKN2D-201ENST00000335766 RIMBP3CA6NJZ7 1639 aa40.16■■■■■ 4.02
CDKN2D-201ENST00000335766 RIMBP3BA6NNM3 1639 aa40.16■■■■■ 4.02
CDKN2D-201ENST00000335766 RIMBP3Q9UFD9 1639 aa40.16■■■■■ 4.02
CDKN2D-201ENST00000335766 FGD5Q6ZNL6 1462 aa40.11■■■■■ 4.01
CDKN2D-201ENST00000335766 CUX1P39880 1505 aa40.11■■■■■ 4.01
CDKN2D-201ENST00000335766 ARHGEF11O15085 1522 aa40.09■■■■■ 4.01
CDKN2D-201ENST00000335766 WDR97A6NE52 1622 aa40.09■■■■■ 4.01
CDKN2D-201ENST00000335766 TDRD9Q8NDG6 1382 aaKnown RBP40.06■■■■■ 4
CDKN2D-201ENST00000335766 CHD1O14646 1710 aa40.01■■■■■ 4
CDKN2D-201ENST00000335766 SUPT5HO00267 1087 aaKnown RBP39.94■■■■□ 3.98
CDKN2D-201ENST00000335766 FBLN2P98095 1184 aa39.9■■■■□ 3.98
CDKN2D-201ENST00000335766 SNAPC4Q5SXM2 1469 aa39.88■■■■□ 3.98
CDKN2D-201ENST00000335766 GRIN2BQ13224 1484 aa39.85■■■■□ 3.97
CDKN2D-201ENST00000335766 MAGI1Q96QZ7 1491 aaPredicted RBP39.85■■■■□ 3.97
CDKN2D-201ENST00000335766 ABCA10Q8WWZ4 1543 aa39.73■■■■□ 3.95
CDKN2D-201ENST00000335766 CYB5RLQ6IPT4 315 aa39.72■■■■□ 3.95
CDKN2D-201ENST00000335766 CLASP1Q7Z460 1538 aa39.71■■■■□ 3.95
CDKN2D-201ENST00000335766 ARAP1Q96P48 1450 aa39.71■■■■□ 3.95
CDKN2D-201ENST00000335766 CHMP7Q8WUX9 453 aaPredicted RBP39.71■■■■□ 3.95
CDKN2D-201ENST00000335766 SYNJ2O15056 1496 aa39.7■■■■□ 3.95
CDKN2D-201ENST00000335766 GAPVD1Q14C86 1478 aa39.69■■■■□ 3.94
CDKN2D-201ENST00000335766 SYNJ1O43426 1573 aa39.64■■■■□ 3.94
CDKN2D-201ENST00000335766 ABCA5Q8WWZ7 1642 aa39.62■■■■□ 3.93
CDKN2D-201ENST00000335766 PBRM1Q86U86 1689 aa39.57■■■■□ 3.93
CDKN2D-201ENST00000335766 WRNQ14191 1432 aaPredicted RBP eCLIP39.57■■■■□ 3.92
CDKN2D-201ENST00000335766 TOP2BQ02880 1626 aa39.51■■■■□ 3.91
CDKN2D-201ENST00000335766 BIVM-ERCC5R4GMW8 1640 aa39.5■■■■□ 3.91
CDKN2D-201ENST00000335766 GRIN2AQ12879 1464 aa39.32■■■■□ 3.89
CDKN2D-201ENST00000335766 ADAMTS12P58397 1594 aa39.29■■■■□ 3.88
CDKN2D-201ENST00000335766 NUP160Q12769 1436 aa39.24■■■■□ 3.87
CDKN2D-201ENST00000335766 FHAD1B1AJZ9 1412 aa39.23■■■■□ 3.87
CDKN2D-201ENST00000335766 ERICH3Q5RHP9 1530 aa39.23■■■■□ 3.87
CDKN2D-201ENST00000335766 TRHP20396 242 aaPredicted RBP39.18■■■■□ 3.86
CDKN2D-201ENST00000335766 CEP170Q5SW79 1584 aa39.14■■■■□ 3.86
CDKN2D-201ENST00000335766 SHROOM2Q13796 1616 aa39.02■■■■□ 3.84
CDKN2D-201ENST00000335766 ERCC6L2Q5T890 1561 aa39.01■■■■□ 3.84
CDKN2D-201ENST00000335766 JPH4Q96JJ6 628 aa38.78■■■■□ 3.8
CDKN2D-201ENST00000335766 PRG4Q92954 1404 aaPredicted RBP38.77■■■■□ 3.8
CDKN2D-201ENST00000335766 IGF1RP08069 1367 aa38.76■■■■□ 3.8
CDKN2D-201ENST00000335766 RUSC2Q8N2Y8 1516 aa38.74■■■■□ 3.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms