RNA–Protein interactions for RNA: ENST00000546243.5

THRA-204, Transcript of thyroid hormone receptor alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene THRA, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-204ENST00000546243 NISCHQ9Y2I1 1504 aa53.74■■■■■ 6.19
THRA-204ENST00000546243 CCDC180Q9P1Z9 1646 aa46.49■■■■■ 5.03
THRA-204ENST00000546243 ABCC9O60706 1549 aa45.41■■■■■ 4.86
THRA-204ENST00000546243 ZCCHC6Q5VYS8 1495 aaKnown RBP45.41■■■■■ 4.86
THRA-204ENST00000546243 SHROOM4Q9ULL8 1493 aa44.71■■■■■ 4.75
THRA-204ENST00000546243 DCAF1Q9Y4B6 1507 aa44.45■■■■■ 4.71
THRA-204ENST00000546243 DCAF8L2P0C7V8 631 aa44.19■■■■■ 4.66
THRA-204ENST00000546243 SUPT5HO00267 1087 aaKnown RBP43.64■■■■■ 4.58
THRA-204ENST00000546243 NACADO15069 1562 aa43.6■■■■■ 4.57
THRA-204ENST00000546243 RB1CC1Q8TDY2 1594 aa43.6■■■■■ 4.57
THRA-204ENST00000546243 MYO15BQ96JP2 1530 aa43.45■■■■■ 4.55
THRA-204ENST00000546243 UNC13AQ9UPW8 1703 aa42.88■■■■■ 4.45
THRA-204ENST00000546243 SCRIBQ14160 1630 aa42.78■■■■■ 4.44
THRA-204ENST00000546243 PABPN1Q86U42 306 aaKnown RBP eCLIP42.62■■■■■ 4.41
THRA-204ENST00000546243 CHIC1Q5VXU3 224 aa42.46■■■■■ 4.39
THRA-204ENST00000546243 BICRAQ9NZM4 1560 aa42.43■■■■■ 4.38
THRA-204ENST00000546243 RSF1Q96T23 1441 aaPredicted RBP42.18■■■■■ 4.34
THRA-204ENST00000546243 CECR2Q9BXF3 1484 aa41.65■■■■■ 4.26
THRA-204ENST00000546243 MROH2BQ7Z745 1585 aa41.57■■■■■ 4.25
THRA-204ENST00000546243 DNAJC5BQ9UF47 199 aa41.41■■■■■ 4.22
THRA-204ENST00000546243 BAZ1AQ9NRL2 1556 aaPredicted RBP41.41■■■■■ 4.22
THRA-204ENST00000546243 WIZO95785 1651 aa41.32■■■■■ 4.21
THRA-204ENST00000546243 EIF4G1Q04637 1599 aaKnown RBP41.22■■■■■ 4.19
THRA-204ENST00000546243 SMARCA4P51532 1647 aa41.07■■■■■ 4.17
THRA-204ENST00000546243 CC2D2AQ9P2K1 1620 aa41.01■■■■■ 4.16
THRA-204ENST00000546243 TRIM41Q8WV44 630 aa40.95■■■■■ 4.15
THRA-204ENST00000546243 TOP2AP11388 1531 aaKnown RBP40.92■■■■■ 4.14
THRA-204ENST00000546243 LOC105371045A0A1W2PR82 267 aa40.86■■■■■ 4.13
THRA-204ENST00000546243 SMARCA2P51531 1590 aa40.58■■■■■ 4.09
THRA-204ENST00000546243 PEG3Q9GZU2 1588 aa40.51■■■■■ 4.08
THRA-204ENST00000546243 CCDC88BA6NC98 1476 aa40.51■■■■■ 4.08
THRA-204ENST00000546243 ATAD2BQ9ULI0 1458 aa40.46■■■■■ 4.07
THRA-204ENST00000546243 PCGF6Q9BYE7 350 aa40.36■■■■■ 4.05
THRA-204ENST00000546243 NCAPD3P42695 1498 aa40.27■■■■■ 4.04
THRA-204ENST00000546243 HRCP23327 699 aa40.26■■■■■ 4.04
THRA-204ENST00000546243 FAM9AQ8IZU1 332 aaPredicted RBP40.22■■■■■ 4.03
THRA-204ENST00000546243 BAZ1BQ9UIG0 1483 aaKnown RBP40.15■■■■■ 4.02
THRA-204ENST00000546243 HMGXB3Q12766 1538 aa40.08■■■■■ 4.01
THRA-204ENST00000546243 ABCC8Q09428 1581 aa40.07■■■■■ 4.01
THRA-204ENST00000546243 TRIM26Q12899 539 aaPredicted RBP40.06■■■■■ 4
THRA-204ENST00000546243 EEA1Q15075 1411 aa39.79■■■■□ 3.96
THRA-204ENST00000546243 WRNQ14191 1432 aaPredicted RBP eCLIP39.66■■■■□ 3.94
THRA-204ENST00000546243 EHMT2Q96KQ7 1210 aa39.6■■■■□ 3.93
THRA-204ENST00000546243 SOGA1O94964 1423 aa39.57■■■■□ 3.92
THRA-204ENST00000546243 NESP48681 1621 aa39.49■■■■□ 3.91
THRA-204ENST00000546243 SYNJ1O43426 1573 aa39.46■■■■□ 3.91
THRA-204ENST00000546243 TNIKQ9UKE5 1360 aa39.41■■■■□ 3.9
THRA-204ENST00000546243 CSRNP3Q8WYN3 585 aa39.41■■■■□ 3.9
THRA-204ENST00000546243 RUSC2Q8N2Y8 1516 aa39.34■■■■□ 3.89
THRA-204ENST00000546243 GOLGA3Q08378 1498 aa39.29■■■■□ 3.88
THRA-204ENST00000546243 CEP162Q5TB80 1403 aa39.28■■■■□ 3.88
THRA-204ENST00000546243 KIF21BO75037 1637 aa39.22■■■■□ 3.87
THRA-204ENST00000546243 TOP2BQ02880 1626 aa39.22■■■■□ 3.87
THRA-204ENST00000546243 CADPSQ9ULU8 1353 aa39.18■■■■□ 3.86
THRA-204ENST00000546243 BIVM-ERCC5R4GMW8 1640 aa39.17■■■■□ 3.86
THRA-204ENST00000546243 ZEB1P37275 1124 aaPredicted RBP39.16■■■■□ 3.86
THRA-204ENST00000546243 CEP164Q9UPV0 1460 aa39.16■■■■□ 3.86
THRA-204ENST00000546243 LAMC3Q9Y6N6 1575 aa39.13■■■■□ 3.85
THRA-204ENST00000546243 PPARGC1BQ86YN6 1023 aaKnown RBP39.06■■■■□ 3.84
THRA-204ENST00000546243 CFTRP13569 1480 aa39.03■■■■□ 3.84
THRA-204ENST00000546243 UBTFP17480 764 aaKnown RBP39.02■■■■□ 3.84
THRA-204ENST00000546243 ERCC6Q03468 1493 aa38.98■■■■□ 3.83
THRA-204ENST00000546243 KIF21AQ7Z4S6 1674 aa38.96■■■■□ 3.83
THRA-204ENST00000546243 PRDM2Q13029 1718 aa38.92■■■■□ 3.82
THRA-204ENST00000546243 PDS5BQ9NTI5 1447 aa38.85■■■■□ 3.81
THRA-204ENST00000546243 FANCD2Q9BXW9 1451 aa38.79■■■■□ 3.8
THRA-204ENST00000546243 CUX1P39880 1505 aa38.79■■■■□ 3.8
THRA-204ENST00000546243 RAPGEF2Q9Y4G8 1499 aa38.72■■■■□ 3.79
THRA-204ENST00000546243 ERICH3Q5RHP9 1530 aa38.72■■■■□ 3.79
THRA-204ENST00000546243 CLIP1P30622 1438 aa38.69■■■■□ 3.78
THRA-204ENST00000546243 PRXQ9BXM0 1461 aa38.61■■■■□ 3.77
THRA-204ENST00000546243 THOC2Q8NI27 1593 aaKnown RBP38.6■■■■□ 3.77
THRA-204ENST00000546243 KIF27Q86VH2 1401 aa38.56■■■■□ 3.76
THRA-204ENST00000546243 VPS8Q8N3P4 1428 aa38.55■■■■□ 3.76
THRA-204ENST00000546243 MRC2Q9UBG0 1479 aa38.49■■■■□ 3.75
THRA-204ENST00000546243 URB2Q14146 1524 aaKnown RBP38.44■■■■□ 3.74
THRA-204ENST00000546243 WDR62O43379 1518 aa38.33■■■■□ 3.73
THRA-204ENST00000546243 TTBK1Q5TCY1 1321 aaPredicted RBP38.27■■■■□ 3.72
THRA-204ENST00000546243 CCER1Q8TC90 406 aaPredicted RBP38.26■■■■□ 3.72
THRA-204ENST00000546243 TOPBP1Q92547 1522 aa38.23■■■■□ 3.71
THRA-204ENST00000546243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.23■■■■□ 3.71
THRA-204ENST00000546243 CUX2O14529 1486 aa38.21■■■■□ 3.71
THRA-204ENST00000546243 APLP2Q06481 763 aa38.2■■■■□ 3.71
THRA-204ENST00000546243 FGD5Q6ZNL6 1462 aa38.17■■■■□ 3.7
THRA-204ENST00000546243 ARAP1Q96P48 1450 aa38.16■■■■□ 3.7
THRA-204ENST00000546243 DNMBPQ6XZF7 1577 aa38.15■■■■□ 3.7
THRA-204ENST00000546243 IGF1RP08069 1367 aa38.06■■■■□ 3.68
THRA-204ENST00000546243 RANGAP1P46060 587 aaPredicted RBP37.98■■■■□ 3.67
THRA-204ENST00000546243 POLA1P09884 1462 aaPredicted RBP37.95■■■■□ 3.67
THRA-204ENST00000546243 ARHGAP35Q9NRY4 1499 aa37.92■■■■□ 3.66
THRA-204ENST00000546243 RAD54L2Q9Y4B4 1467 aa37.91■■■■□ 3.66
THRA-204ENST00000546243 CARMIL1Q5VZK9 1371 aa37.91■■■■□ 3.66
THRA-204ENST00000546243 ABCA10Q8WWZ4 1543 aa37.88■■■■□ 3.65
THRA-204ENST00000546243 ZNF608Q9ULD9 1512 aaPredicted RBP37.8■■■■□ 3.64
THRA-204ENST00000546243 TARBP1Q13395 1621 aaKnown RBP37.78■■■■□ 3.64
THRA-204ENST00000546243 IFT140Q96RY7 1462 aa37.76■■■■□ 3.64
THRA-204ENST00000546243 CUL7Q14999 1698 aa37.72■■■■□ 3.63
THRA-204ENST00000546243 HNRNPUL2Q1KMD3 747 aaKnown RBP37.69■■■■□ 3.62
THRA-204ENST00000546243 MAP3K1Q13233 1512 aa37.68■■■■□ 3.62
THRA-204ENST00000546243 WDR97A6NE52 1622 aa37.66■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms