RNA–Protein interactions for RNA: ENST00000611459.1

GSX2-205, Transcript of GS homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GSX2, Length 1,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSX2-205ENST00000611459 NISCHQ9Y2I1 1504 aa55.44■■■■■ 6.47
GSX2-205ENST00000611459 CCDC180Q9P1Z9 1646 aa49.88■■■■■ 5.58
GSX2-205ENST00000611459 ABCC9O60706 1549 aa49.66■■■■■ 5.54
GSX2-205ENST00000611459 RB1CC1Q8TDY2 1594 aa47.32■■■■■ 5.17
GSX2-205ENST00000611459 NACADO15069 1562 aa47■■■■■ 5.11
GSX2-205ENST00000611459 UNC13AQ9UPW8 1703 aa46.61■■■■■ 5.05
GSX2-205ENST00000611459 DNAJC5BQ9UF47 199 aa46.59■■■■■ 5.05
GSX2-205ENST00000611459 DCAF8L2P0C7V8 631 aa46.43■■■■■ 5.02
GSX2-205ENST00000611459 MYO15BQ96JP2 1530 aa46.39■■■■■ 5.02
GSX2-205ENST00000611459 PABPN1Q86U42 306 aaKnown RBP eCLIP46.13■■■■■ 4.98
GSX2-205ENST00000611459 BICRAQ9NZM4 1560 aa46.11■■■■■ 4.97
GSX2-205ENST00000611459 ZCCHC6Q5VYS8 1495 aaKnown RBP46■■■■■ 4.95
GSX2-205ENST00000611459 DCAF1Q9Y4B6 1507 aa45.82■■■■■ 4.92
GSX2-205ENST00000611459 SCRIBQ14160 1630 aa45.37■■■■■ 4.85
GSX2-205ENST00000611459 SHROOM4Q9ULL8 1493 aa45.31■■■■■ 4.84
GSX2-205ENST00000611459 CC2D2AQ9P2K1 1620 aa44.97■■■■■ 4.79
GSX2-205ENST00000611459 EIF4G1Q04637 1599 aaKnown RBP44.87■■■■■ 4.77
GSX2-205ENST00000611459 CECR2Q9BXF3 1484 aa44.71■■■■■ 4.75
GSX2-205ENST00000611459 NCAPD3P42695 1498 aa43.36■■■■■ 4.53
GSX2-205ENST00000611459 SMARCA4P51532 1647 aa43.32■■■■■ 4.53
GSX2-205ENST00000611459 ATAD2BQ9ULI0 1458 aa43.25■■■■■ 4.51
GSX2-205ENST00000611459 HMGXB3Q12766 1538 aa43.12■■■■■ 4.49
GSX2-205ENST00000611459 SMARCA2P51531 1590 aa43.12■■■■■ 4.49
GSX2-205ENST00000611459 BAZ1AQ9NRL2 1556 aaPredicted RBP43■■■■■ 4.47
GSX2-205ENST00000611459 PEG3Q9GZU2 1588 aa42.91■■■■■ 4.46
GSX2-205ENST00000611459 BAZ1BQ9UIG0 1483 aaKnown RBP42.79■■■■■ 4.44
GSX2-205ENST00000611459 CUX2O14529 1486 aa42.78■■■■■ 4.44
GSX2-205ENST00000611459 ERCC6Q03468 1493 aa42.76■■■■■ 4.44
GSX2-205ENST00000611459 MROH2BQ7Z745 1585 aa42.76■■■■■ 4.44
GSX2-205ENST00000611459 NESP48681 1621 aa42.75■■■■■ 4.43
GSX2-205ENST00000611459 DNAJC5Q9H3Z4 198 aa42.64■■■■■ 4.42
GSX2-205ENST00000611459 LAMC3Q9Y6N6 1575 aa42.44■■■■■ 4.38
GSX2-205ENST00000611459 THOC2Q8NI27 1593 aaKnown RBP42.43■■■■■ 4.38
GSX2-205ENST00000611459 KIF21AQ7Z4S6 1674 aa42.35■■■■■ 4.37
GSX2-205ENST00000611459 WIZO95785 1651 aa42.31■■■■■ 4.36
GSX2-205ENST00000611459 PDS5BQ9NTI5 1447 aa42.02■■■■■ 4.32
GSX2-205ENST00000611459 CADPSQ9ULU8 1353 aa41.97■■■■■ 4.31
GSX2-205ENST00000611459 RSF1Q96T23 1441 aaPredicted RBP41.8■■■■■ 4.28
GSX2-205ENST00000611459 MRC2Q9UBG0 1479 aa41.76■■■■■ 4.28
GSX2-205ENST00000611459 WDR62O43379 1518 aa41.75■■■■■ 4.27
GSX2-205ENST00000611459 TOP2AP11388 1531 aaKnown RBP41.69■■■■■ 4.27
GSX2-205ENST00000611459 CFTRP13569 1480 aa41.58■■■■■ 4.25
GSX2-205ENST00000611459 CEP164Q9UPV0 1460 aa41.58■■■■■ 4.25
GSX2-205ENST00000611459 FANCD2Q9BXW9 1451 aa41.54■■■■■ 4.24
GSX2-205ENST00000611459 PRDM2Q13029 1718 aa41.46■■■■■ 4.23
GSX2-205ENST00000611459 URB2Q14146 1524 aaKnown RBP41.3■■■■■ 4.2
GSX2-205ENST00000611459 CCDC88BA6NC98 1476 aa41.17■■■■■ 4.18
GSX2-205ENST00000611459 TOPBP1Q92547 1522 aa40.82■■■■■ 4.12
GSX2-205ENST00000611459 ZNF608Q9ULD9 1512 aaPredicted RBP40.77■■■■■ 4.12
GSX2-205ENST00000611459 IFT140Q96RY7 1462 aa40.74■■■■■ 4.11
GSX2-205ENST00000611459 DNMBPQ6XZF7 1577 aa40.69■■■■■ 4.11
GSX2-205ENST00000611459 TRIM41Q8WV44 630 aa40.68■■■■■ 4.1
GSX2-205ENST00000611459 OSCARQ8IYS5 282 aa40.65■■■■■ 4.1
GSX2-205ENST00000611459 EIF4G3O43432 1585 aaKnown RBP40.62■■■■■ 4.09
GSX2-205ENST00000611459 ABCC8Q09428 1581 aa40.61■■■■■ 4.09
GSX2-205ENST00000611459 TARBP1Q13395 1621 aaKnown RBP40.57■■■■■ 4.09
GSX2-205ENST00000611459 RIMBP3CA6NJZ7 1639 aa40.44■■■■■ 4.06
GSX2-205ENST00000611459 RIMBP3BA6NNM3 1639 aa40.44■■■■■ 4.06
GSX2-205ENST00000611459 RIMBP3Q9UFD9 1639 aa40.44■■■■■ 4.06
GSX2-205ENST00000611459 POLA1P09884 1462 aaPredicted RBP40.4■■■■■ 4.06
GSX2-205ENST00000611459 CHD1O14646 1710 aa40.4■■■■■ 4.06
GSX2-205ENST00000611459 AQRO60306 1485 aaKnown RBP eCLIP40.32■■■■■ 4.04
GSX2-205ENST00000611459 RAD54L2Q9Y4B4 1467 aa40.24■■■■■ 4.03
GSX2-205ENST00000611459 ARHGEF11O15085 1522 aa40.23■■■■■ 4.03
GSX2-205ENST00000611459 CUX1P39880 1505 aa40.17■■■■■ 4.02
GSX2-205ENST00000611459 FGD5Q6ZNL6 1462 aa40.14■■■■■ 4.02
GSX2-205ENST00000611459 SOGA1O94964 1423 aa40.09■■■■■ 4.01
GSX2-205ENST00000611459 WDR97A6NE52 1622 aa40.09■■■■■ 4.01
GSX2-205ENST00000611459 TDRD9Q8NDG6 1382 aaKnown RBP40.02■■■■■ 4
GSX2-205ENST00000611459 SNAPC4Q5SXM2 1469 aa39.94■■■■□ 3.98
GSX2-205ENST00000611459 PBRM1Q86U86 1689 aa39.89■■■■□ 3.98
GSX2-205ENST00000611459 ARAP1Q96P48 1450 aa39.86■■■■□ 3.97
GSX2-205ENST00000611459 CLASP1Q7Z460 1538 aa39.85■■■■□ 3.97
GSX2-205ENST00000611459 FBLN2P98095 1184 aa39.83■■■■□ 3.97
GSX2-205ENST00000611459 MAGI1Q96QZ7 1491 aaPredicted RBP39.81■■■■□ 3.96
GSX2-205ENST00000611459 GRIN2BQ13224 1484 aa39.78■■■■□ 3.96
GSX2-205ENST00000611459 ABCA5Q8WWZ7 1642 aa39.76■■■■□ 3.95
GSX2-205ENST00000611459 SUPT5HO00267 1087 aaKnown RBP39.74■■■■□ 3.95
GSX2-205ENST00000611459 CYB5RLQ6IPT4 315 aa39.71■■■■□ 3.95
GSX2-205ENST00000611459 SYNJ1O43426 1573 aa39.71■■■■□ 3.95
GSX2-205ENST00000611459 ABCA10Q8WWZ4 1543 aa39.69■■■■□ 3.94
GSX2-205ENST00000611459 SYNJ2O15056 1496 aa39.68■■■■□ 3.94
GSX2-205ENST00000611459 GAPVD1Q14C86 1478 aa39.66■■■■□ 3.94
GSX2-205ENST00000611459 BIVM-ERCC5R4GMW8 1640 aa39.62■■■■□ 3.93
GSX2-205ENST00000611459 CHMP7Q8WUX9 453 aaPredicted RBP39.57■■■■□ 3.93
GSX2-205ENST00000611459 TOP2BQ02880 1626 aa39.54■■■■□ 3.92
GSX2-205ENST00000611459 ADAMTS12P58397 1594 aa39.42■■■■□ 3.9
GSX2-205ENST00000611459 WRNQ14191 1432 aaPredicted RBP eCLIP39.4■■■■□ 3.9
GSX2-205ENST00000611459 GRIN2AQ12879 1464 aa39.33■■■■□ 3.89
GSX2-205ENST00000611459 CEP170Q5SW79 1584 aa39.29■■■■□ 3.88
GSX2-205ENST00000611459 ERCC6L2Q5T890 1561 aa39.26■■■■□ 3.88
GSX2-205ENST00000611459 NUP160Q12769 1436 aa39.22■■■■□ 3.87
GSX2-205ENST00000611459 ERICH3Q5RHP9 1530 aa39.19■■■■□ 3.86
GSX2-205ENST00000611459 TRHP20396 242 aaPredicted RBP39.18■■■■□ 3.86
GSX2-205ENST00000611459 SHROOM2Q13796 1616 aa39.18■■■■□ 3.86
GSX2-205ENST00000611459 FHAD1B1AJZ9 1412 aa39.14■■■■□ 3.86
GSX2-205ENST00000611459 RUSC2Q8N2Y8 1516 aa38.89■■■■□ 3.82
GSX2-205ENST00000611459 PRG4Q92954 1404 aaPredicted RBP38.73■■■■□ 3.79
GSX2-205ENST00000611459 KIF13AQ9H1H9 1805 aa38.73■■■■□ 3.79
GSX2-205ENST00000611459 CUL7Q14999 1698 aa38.68■■■■□ 3.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms