Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.728e-6■■□□□ 13.3
XRN2Q9H0D6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.688e-6■■□□□ 13.3
XRN2Q9H0D6 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.09■□□□□ 0.658e-6■■□□□ 13.3
XRN2Q9H0D6 MXRA8-210ENST00000478517 846 ntTSL 318.93■□□□□ 0.628e-6■■□□□ 13.3
XRN2Q9H0D6 HDLBP-223ENST00000449864 529 ntTSL 518.74■□□□□ 0.592e-10■■□□□ 13.3
XRN2Q9H0D6 KHSRP-207ENST00000595548 801 ntTSL 218.47■□□□□ 0.558e-6■■□□□ 13.3
XRN2Q9H0D6 MXRA8-208ENST00000476718 1001 ntTSL 318.37■□□□□ 0.538e-6■■□□□ 13.3
XRN2Q9H0D6 CLIC4-203ENST00000489758 439 ntTSL 218.24■□□□□ 0.515e-6■■□□□ 13.3
XRN2Q9H0D6 HSF4-205ENST00000517750 546 ntTSL 518.2■□□□□ 0.58e-6■■□□□ 13.3
XRN2Q9H0D6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.448e-6■■□□□ 13.3
XRN2Q9H0D6 SS18L1-204ENST00000491916 456 ntTSL 217.67■□□□□ 0.428e-6■■□□□ 13.3
XRN2Q9H0D6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.381e-10■■□□□ 13.3
XRN2Q9H0D6 PIK3CB-204ENST00000462898 4747 ntTSL 516.94■□□□□ 0.34e-6■■□□□ 13.3
XRN2Q9H0D6 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.268e-6■■□□□ 13.3
XRN2Q9H0D6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.258e-6■■□□□ 13.3
XRN2Q9H0D6 MXRA8-207ENST00000474033 1171 ntTSL 1 (best)16.43■□□□□ 0.228e-6■■□□□ 13.3
XRN2Q9H0D6 HSF4-208ENST00000519224 637 ntTSL 515.92■□□□□ 0.148e-6■■□□□ 13.3
XRN2Q9H0D6 SHOX2-206ENST00000554685 439 ntTSL 515.91■□□□□ 0.148e-6■■□□□ 13.3
XRN2Q9H0D6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.88■□□□□ 0.138e-6■■□□□ 13.3
XRN2Q9H0D6 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.138e-6■■□□□ 13.3
XRN2Q9H0D6 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.64■□□□□ 0.098e-6■■□□□ 13.3
XRN2Q9H0D6 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.078e-6■■□□□ 13.3
XRN2Q9H0D6 KHSRP-210ENST00000599395 837 ntTSL 515.4■□□□□ 0.068e-6■■□□□ 13.3
XRN2Q9H0D6 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.31■□□□□ 0.048e-6■■□□□ 13.3
XRN2Q9H0D6 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.018e-6■■□□□ 13.3
XRN2Q9H0D6 ARF4-208ENST00000495354 495 ntTSL 314.95□□□□□ -0.028e-6■■□□□ 13.3
XRN2Q9H0D6 DGKZ-209ENST00000525242 542 ntTSL 414.94□□□□□ -0.028e-6■■□□□ 13.3
XRN2Q9H0D6 HDLBP-210ENST00000423693 544 ntTSL 514.91□□□□□ -0.022e-10■■□□□ 13.3
XRN2Q9H0D6 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC14.7□□□□□ -0.062e-6■■□□□ 13.3
XRN2Q9H0D6 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.068e-6■■□□□ 13.3
XRN2Q9H0D6 RABL6-205ENST00000435930 3328 ntTSL 214.61□□□□□ -0.078e-6■■□□□ 13.3
XRN2Q9H0D6 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.078e-6■■□□□ 13.3
XRN2Q9H0D6 HDLBP-246ENST00000496569 374 ntTSL 414.54□□□□□ -0.082e-10■■□□□ 13.3
XRN2Q9H0D6 ATG16L2-220ENST00000544490 3731 ntTSL 214.51□□□□□ -0.098e-6■■□□□ 13.3
XRN2Q9H0D6 NLK-204ENST00000583517 695 ntTSL 314.5□□□□□ -0.098e-6■■□□□ 13.3
XRN2Q9H0D6 ARFRP1-206ENST00000610774 5178 ntTSL 214.49□□□□□ -0.096e-7■■□□□ 13.3
XRN2Q9H0D6 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.138e-6■■□□□ 13.3
XRN2Q9H0D6 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.148e-6■■□□□ 13.3
XRN2Q9H0D6 LINC00963-216ENST00000623185 786 ntTSL 5 BASIC14.11□□□□□ -0.152e-6■■□□□ 13.3
XRN2Q9H0D6 PPP4R1-219ENST00000581250 578 ntTSL 414.05□□□□□ -0.161e-10■■□□□ 13.3
XRN2Q9H0D6 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.93□□□□□ -0.188e-6■■□□□ 13.3
XRN2Q9H0D6 ATG16L2-203ENST00000439504 3841 ntTSL 1 (best)13.67□□□□□ -0.228e-6■■□□□ 13.3
XRN2Q9H0D6 RABL6-209ENST00000466096 3949 ntTSL 1 (best)13.64□□□□□ -0.231e-6■■□□□ 13.3
XRN2Q9H0D6 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.235e-6■■□□□ 13.3
XRN2Q9H0D6 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.248e-6■■□□□ 13.3
XRN2Q9H0D6 LINC00963-214ENST00000622680 781 ntTSL 1 (best)13.51□□□□□ -0.252e-6■■□□□ 13.3
XRN2Q9H0D6 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.271e-8■■□□□ 13.3
XRN2Q9H0D6 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC13.16□□□□□ -0.38e-6■■□□□ 13.3
XRN2Q9H0D6 HDLBP-207ENST00000420451 559 ntTSL 413.04□□□□□ -0.322e-10■■□□□ 13.3
XRN2Q9H0D6 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC13□□□□□ -0.338e-6■■□□□ 13.3
XRN2Q9H0D6 DGKZ-220ENST00000532868 3118 ntTSL 2 BASIC12.89□□□□□ -0.358e-6■■□□□ 13.3
XRN2Q9H0D6 CIRBP-236ENST00000592051 573 ntTSL 412.87□□□□□ -0.352e-7■■□□□ 13.3
XRN2Q9H0D6 HDLBP-227ENST00000458564 420 ntTSL 312.85□□□□□ -0.352e-10■■□□□ 13.3
XRN2Q9H0D6 DGKZ-219ENST00000531879 2922 ntTSL 212.79□□□□□ -0.368e-6■■□□□ 13.3
XRN2Q9H0D6 LINC00963-220ENST00000625171 830 ntTSL 512.78□□□□□ -0.362e-6■■□□□ 13.3
XRN2Q9H0D6 HDLBP-224ENST00000452065 996 ntTSL 512.75□□□□□ -0.372e-10■■□□□ 13.3
XRN2Q9H0D6 DGKZ-208ENST00000524984 3512 ntTSL 212.61□□□□□ -0.398e-6■■□□□ 13.3
XRN2Q9H0D6 LINC00963-207ENST00000454635 910 ntTSL 5 BASIC12.56□□□□□ -0.42e-6■■□□□ 13.3
XRN2Q9H0D6 CLIC4-202ENST00000488683 2723 ntTSL 212.53□□□□□ -0.45e-6■■□□□ 13.3
XRN2Q9H0D6 HDLBP-213ENST00000427007 459 ntTSL 312.48□□□□□ -0.412e-10■■□□□ 13.3
XRN2Q9H0D6 HDLBP-217ENST00000430918 612 ntTSL 312.48□□□□□ -0.412e-10■■□□□ 13.3
XRN2Q9H0D6 ARF4-207ENST00000493378 548 ntTSL 312.4□□□□□ -0.428e-6■■□□□ 13.3
XRN2Q9H0D6 HDLBP-219ENST00000442714 569 ntTSL 412.39□□□□□ -0.432e-10■■□□□ 13.3
XRN2Q9H0D6 SHOX2-205ENST00000490689 4184 ntTSL 512.36□□□□□ -0.438e-6■■□□□ 13.3
XRN2Q9H0D6 HDLBP-230ENST00000462130 464 ntTSL 412.31□□□□□ -0.442e-10■■□□□ 13.3
XRN2Q9H0D6 HDLBP-205ENST00000413241 581 ntTSL 512.29□□□□□ -0.442e-10■■□□□ 13.3
XRN2Q9H0D6 SET-207ENST00000466009 597 ntTSL 312.28□□□□□ -0.441e-10■■□□□ 13.3
XRN2Q9H0D6 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.28□□□□□ -0.448e-6■■□□□ 13.3
XRN2Q9H0D6 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC12.24□□□□□ -0.451e-8■■□□□ 13.3
XRN2Q9H0D6 HDLBP-206ENST00000417540 525 ntTSL 412.13□□□□□ -0.472e-10■■□□□ 13.3
XRN2Q9H0D6 HDLBP-216ENST00000428482 1096 ntTSL 512.13□□□□□ -0.472e-10■■□□□ 13.3
XRN2Q9H0D6 PPP4R1-220ENST00000581835 379 ntTSL 212.11□□□□□ -0.471e-10■■□□□ 13.3
XRN2Q9H0D6 KDELR2-203ENST00000454368 2478 ntTSL 211.66□□□□□ -0.548e-6■■□□□ 13.3
XRN2Q9H0D6 HDLBP-203ENST00000391975 6372 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.611e-8■■□□□ 13.3
XRN2Q9H0D6 HDLBP-211ENST00000425989 530 ntTSL 510.39□□□□□ -0.752e-10■■□□□ 13.3
XRN2Q9H0D6 LINC00963-209ENST00000607931 473 ntTSL 510.35□□□□□ -0.753e-6■■□□□ 13.3
XRN2Q9H0D6 LINC00963-219ENST00000624390 472 ntTSL 59.75□□□□□ -0.852e-6■■□□□ 13.3
XRN2Q9H0D6 HDLBP-201ENST00000310931 4571 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.881e-8■■□□□ 13.3
XRN2Q9H0D6 LINC00963-218ENST00000624138 261 ntTSL 59.25□□□□□ -0.932e-6■■□□□ 13.3
XRN2Q9H0D6 HDLBP-222ENST00000449504 566 ntTSL 59.22□□□□□ -0.932e-10■■□□□ 13.3
XRN2Q9H0D6 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.968e-6■■□□□ 13.3
XRN2Q9H0D6 SUCO-205ENST00000608566 756 ntTSL 28.22□□□□□ -1.098e-6■■□□□ 13.3
XRN2Q9H0D6 ATP6V0B-212ENST00000532072 577 ntTSL 48.11□□□□□ -1.118e-6■■□□□ 13.3
XRN2Q9H0D6 PPP4R1-216ENST00000580283 378 ntTSL 28.03□□□□□ -1.121e-10■■□□□ 13.3
XRN2Q9H0D6 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.81□□□□□ -1.168e-6■■□□□ 13.3
XRN2Q9H0D6 ARF4-204ENST00000486310 1601 ntTSL 37.73□□□□□ -1.178e-6■■□□□ 13.3
XRN2Q9H0D6 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.178e-6■■□□□ 13.3
XRN2Q9H0D6 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.24e-6■■□□□ 13.3
XRN2Q9H0D6 LINC00963-215ENST00000622972 444 ntTSL 57.03□□□□□ -1.282e-6■■□□□ 13.3
XRN2Q9H0D6 KDM6A-209ENST00000484732 640 ntTSL 26.27□□□□□ -1.418e-6■■□□□ 13.3
XRN2Q9H0D6 KDM6A-205ENST00000433797 4324 ntTSL 1 (best)5.75□□□□□ -1.498e-6■■□□□ 13.3
XRN2Q9H0D6 KDM6A-203ENST00000414389 4189 ntTSL 54.9□□□□□ -1.628e-6■■□□□ 13.3
XRN2Q9H0D6 STMN1-207ENST00000465604 2947 ntTSL 1 (best)4.76□□□□□ -1.658e-6■■□□□ 13.3
XRN2Q9H0D6 KDM6A-210ENST00000485072 382 ntTSL 54.39□□□□□ -1.718e-6■■□□□ 13.3
XRN2Q9H0D6 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.24□□□□□ -1.738e-6■■□□□ 13.3
XRN2Q9H0D6 ARF4-203ENST00000483848 404 ntTSL 52.91□□□□□ -1.948e-6■■□□□ 13.3
XRN2Q9H0D6 ABHD17A-203ENST00000588598 5425 ntTSL 219.93■□□□□ 0.789e-8■■□□□ 13.3
XRN2Q9H0D6 ABHD17A-205ENST00000591351 4647 ntTSL 217.97■□□□□ 0.479e-8■■□□□ 13.3
XRN2Q9H0D6 QTRT1-205ENST00000587599 994 ntTSL 320.6■□□□□ 0.895e-6■■□□□ 13.3
XRN2Q9H0D6 MGAT5-203ENST00000468758 816 ntTSL 529.05■■■□□ 2.241e-6■■□□□ 13.3
Retrieved 100 of 21,068 protein–RNA pairs in 178.9 ms