RNA–Protein interactions for RNA: ENST00000414389.5

KDM6A-203, Transcript of lysine demethylase 6A, humanhuman

TSL 5

Gene KDM6A, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM6A-203ENST00000414389 NISCHQ9Y2I1 1504 aa10.75□□□□□ -0.69
KDM6A-203ENST00000414389 CCDC180Q9P1Z9 1646 aa9.78□□□□□ -0.84
KDM6A-203ENST00000414389 MYO15BQ96JP2 1530 aa9.2□□□□□ -0.94
KDM6A-203ENST00000414389 DCAF1Q9Y4B6 1507 aa9.14□□□□□ -0.95
KDM6A-203ENST00000414389 NACADO15069 1562 aa9.06□□□□□ -0.96
KDM6A-203ENST00000414389 ZCCHC6Q5VYS8 1495 aaKnown RBP9.03□□□□□ -0.96
KDM6A-203ENST00000414389 ABCC9O60706 1549 aa9□□□□□ -0.97
KDM6A-203ENST00000414389 RB1CC1Q8TDY2 1594 aa8.99□□□□□ -0.97
KDM6A-203ENST00000414389 SHROOM4Q9ULL8 1493 aa8.89□□□□□ -0.99
KDM6A-203ENST00000414389 UNC13AQ9UPW8 1703 aa8.88□□□□□ -0.99
KDM6A-203ENST00000414389 BICRAQ9NZM4 1560 aa8.74□□□□□ -1.01
KDM6A-203ENST00000414389 SCRIBQ14160 1630 aa8.56□□□□□ -1.04
KDM6A-203ENST00000414389 PEG3Q9GZU2 1588 aa8.45□□□□□ -1.06
KDM6A-203ENST00000414389 DCAF8L2P0C7V8 631 aa8.44□□□□□ -1.06
KDM6A-203ENST00000414389 EIF4G1Q04637 1599 aaKnown RBP8.43□□□□□ -1.06
KDM6A-203ENST00000414389 SMARCA4P51532 1647 aa8.36□□□□□ -1.07
KDM6A-203ENST00000414389 CC2D2AQ9P2K1 1620 aa8.36□□□□□ -1.07
KDM6A-203ENST00000414389 BAZ1AQ9NRL2 1556 aaPredicted RBP8.35□□□□□ -1.07
KDM6A-203ENST00000414389 HMGXB3Q12766 1538 aa8.35□□□□□ -1.07
KDM6A-203ENST00000414389 SMARCA2P51531 1590 aa8.35□□□□□ -1.07
KDM6A-203ENST00000414389 NCAPD3P42695 1498 aa8.29□□□□□ -1.08
KDM6A-203ENST00000414389 PABPN1Q86U42 306 aaKnown RBP eCLIP8.24□□□□□ -1.09
KDM6A-203ENST00000414389 ATAD2BQ9ULI0 1458 aa8.23□□□□□ -1.09
KDM6A-203ENST00000414389 CECR2Q9BXF3 1484 aa8.2□□□□□ -1.1
KDM6A-203ENST00000414389 MROH2BQ7Z745 1585 aa8.2□□□□□ -1.1
KDM6A-203ENST00000414389 PRDM2Q13029 1718 aa8.18□□□□□ -1.1
KDM6A-203ENST00000414389 TOP2AP11388 1531 aaKnown RBP8.16□□□□□ -1.1
KDM6A-203ENST00000414389 SUPT5HO00267 1087 aaKnown RBP8.15□□□□□ -1.1
KDM6A-203ENST00000414389 DNAJC5BQ9UF47 199 aa8.14□□□□□ -1.11
KDM6A-203ENST00000414389 WIZO95785 1651 aa8.12□□□□□ -1.11
KDM6A-203ENST00000414389 RSF1Q96T23 1441 aaPredicted RBP8.12□□□□□ -1.11
KDM6A-203ENST00000414389 LAMC3Q9Y6N6 1575 aa8.11□□□□□ -1.11
KDM6A-203ENST00000414389 BAZ1BQ9UIG0 1483 aaKnown RBP8.1□□□□□ -1.11
KDM6A-203ENST00000414389 THOC2Q8NI27 1593 aaKnown RBP8□□□□□ -1.13
KDM6A-203ENST00000414389 CFTRP13569 1480 aa7.99□□□□□ -1.13
KDM6A-203ENST00000414389 KIF21AQ7Z4S6 1674 aa7.95□□□□□ -1.14
KDM6A-203ENST00000414389 CUX2O14529 1486 aa7.95□□□□□ -1.14
KDM6A-203ENST00000414389 WDR62O43379 1518 aa7.94□□□□□ -1.14
KDM6A-203ENST00000414389 WDR97A6NE52 1622 aa7.93□□□□□ -1.14
KDM6A-203ENST00000414389 CADPSQ9ULU8 1353 aa7.93□□□□□ -1.14
KDM6A-203ENST00000414389 CCDC88BA6NC98 1476 aa7.92□□□□□ -1.14
KDM6A-203ENST00000414389 PDS5BQ9NTI5 1447 aa7.89□□□□□ -1.15
KDM6A-203ENST00000414389 ABCC8Q09428 1581 aa7.87□□□□□ -1.15
KDM6A-203ENST00000414389 MRC2Q9UBG0 1479 aa7.86□□□□□ -1.15
KDM6A-203ENST00000414389 NESP48681 1621 aa7.84□□□□□ -1.15
KDM6A-203ENST00000414389 BIVM-ERCC5R4GMW8 1640 aa7.84□□□□□ -1.15
KDM6A-203ENST00000414389 DNMBPQ6XZF7 1577 aa7.84□□□□□ -1.15
KDM6A-203ENST00000414389 CEP164Q9UPV0 1460 aa7.83□□□□□ -1.16
KDM6A-203ENST00000414389 FANCD2Q9BXW9 1451 aa7.82□□□□□ -1.16
KDM6A-203ENST00000414389 CHIC1Q5VXU3 224 aa7.82□□□□□ -1.16
KDM6A-203ENST00000414389 URB2Q14146 1524 aaKnown RBP7.78□□□□□ -1.16
KDM6A-203ENST00000414389 TARBP1Q13395 1621 aaKnown RBP7.78□□□□□ -1.16
KDM6A-203ENST00000414389 TOP2BQ02880 1626 aa7.77□□□□□ -1.17
KDM6A-203ENST00000414389 ERCC6Q03468 1493 aa7.76□□□□□ -1.17
KDM6A-203ENST00000414389 TOPBP1Q92547 1522 aa7.75□□□□□ -1.17
KDM6A-203ENST00000414389 IFT140Q96RY7 1462 aa7.73□□□□□ -1.17
KDM6A-203ENST00000414389 CUX1P39880 1505 aa7.72□□□□□ -1.17
KDM6A-203ENST00000414389 ABCA5Q8WWZ7 1642 aa7.72□□□□□ -1.17
KDM6A-203ENST00000414389 ABCA10Q8WWZ4 1543 aa7.68□□□□□ -1.18
KDM6A-203ENST00000414389 PBRM1Q86U86 1689 aa7.68□□□□□ -1.18
KDM6A-203ENST00000414389 TRIM41Q8WV44 630 aa7.67□□□□□ -1.18
KDM6A-203ENST00000414389 EIF4G3O43432 1585 aaKnown RBP7.67□□□□□ -1.18
KDM6A-203ENST00000414389 SYNJ1O43426 1573 aa7.67□□□□□ -1.18
KDM6A-203ENST00000414389 POLA1P09884 1462 aaPredicted RBP7.67□□□□□ -1.18
KDM6A-203ENST00000414389 ERICH3Q5RHP9 1530 aa7.63□□□□□ -1.19
KDM6A-203ENST00000414389 FGD5Q6ZNL6 1462 aa7.63□□□□□ -1.19
KDM6A-203ENST00000414389 CUL7Q14999 1698 aa7.61□□□□□ -1.19
KDM6A-203ENST00000414389 WRNQ14191 1432 aaPredicted RBP eCLIP7.61□□□□□ -1.19
KDM6A-203ENST00000414389 MAGI1Q96QZ7 1491 aaPredicted RBP7.61□□□□□ -1.19
KDM6A-203ENST00000414389 ADAMTS12P58397 1594 aa7.59□□□□□ -1.19
KDM6A-203ENST00000414389 CHD1O14646 1710 aa7.57□□□□□ -1.2
KDM6A-203ENST00000414389 CLASP1Q7Z460 1538 aa7.57□□□□□ -1.2
KDM6A-203ENST00000414389 SHROOM2Q13796 1616 aa7.56□□□□□ -1.2
KDM6A-203ENST00000414389 GRIN2BQ13224 1484 aa7.56□□□□□ -1.2
KDM6A-203ENST00000414389 SOGA1O94964 1423 aa7.55□□□□□ -1.2
KDM6A-203ENST00000414389 ZNF608Q9ULD9 1512 aaPredicted RBP7.54□□□□□ -1.2
KDM6A-203ENST00000414389 LOC105371045A0A1W2PR82 267 aa7.52□□□□□ -1.2
KDM6A-203ENST00000414389 FAM9AQ8IZU1 332 aaPredicted RBP7.52□□□□□ -1.2
KDM6A-203ENST00000414389 SYNJ2O15056 1496 aa7.52□□□□□ -1.21
KDM6A-203ENST00000414389 GAPVD1Q14C86 1478 aa7.52□□□□□ -1.21
KDM6A-203ENST00000414389 RAD54L2Q9Y4B4 1467 aa7.51□□□□□ -1.21
KDM6A-203ENST00000414389 NUP160Q12769 1436 aa7.5□□□□□ -1.21
KDM6A-203ENST00000414389 FHAD1B1AJZ9 1412 aa7.48□□□□□ -1.21
KDM6A-203ENST00000414389 RUSC2Q8N2Y8 1516 aa7.48□□□□□ -1.21
KDM6A-203ENST00000414389 EEA1Q15075 1411 aa7.48□□□□□ -1.21
KDM6A-203ENST00000414389 SNAPC4Q5SXM2 1469 aa7.48□□□□□ -1.21
KDM6A-203ENST00000414389 CTTNBP2Q8WZ74 1663 aa7.47□□□□□ -1.21
KDM6A-203ENST00000414389 GRIN2AQ12879 1464 aa7.46□□□□□ -1.22
KDM6A-203ENST00000414389 CEP170Q5SW79 1584 aa7.46□□□□□ -1.22
KDM6A-203ENST00000414389 KIF21BO75037 1637 aa7.46□□□□□ -1.22
KDM6A-203ENST00000414389 KIF27Q86VH2 1401 aa7.45□□□□□ -1.22
KDM6A-203ENST00000414389 AQRO60306 1485 aaKnown RBP eCLIP7.45□□□□□ -1.222e-6■■■■□ 23
KDM6A-203ENST00000414389 PRXQ9BXM0 1461 aa7.43□□□□□ -1.22
KDM6A-203ENST00000414389 RIMBP3CA6NJZ7 1639 aa7.41□□□□□ -1.22
KDM6A-203ENST00000414389 RIMBP3BA6NNM3 1639 aa7.41□□□□□ -1.22
KDM6A-203ENST00000414389 RIMBP3Q9UFD9 1639 aa7.41□□□□□ -1.22
KDM6A-203ENST00000414389 EHMT2Q96KQ7 1210 aa7.41□□□□□ -1.22
KDM6A-203ENST00000414389 IGF1RP08069 1367 aa7.41□□□□□ -1.22
KDM6A-203ENST00000414389 UGGT2Q9NYU1 1516 aa7.4□□□□□ -1.22
KDM6A-203ENST00000414389 CSRNP3Q8WYN3 585 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms