RNA–Protein interactions for RNA: ENST00000595548.5

KHSRP-207, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 2

Gene KHSRP, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-207ENST00000595548 NISCHQ9Y2I1 1504 aa38.38■■■■□ 3.74
KHSRP-207ENST00000595548 CCDC180Q9P1Z9 1646 aa34.12■■■■□ 3.05
KHSRP-207ENST00000595548 ABCC9O60706 1549 aa33.17■■■□□ 2.9
KHSRP-207ENST00000595548 RB1CC1Q8TDY2 1594 aa32.05■■■□□ 2.72
KHSRP-207ENST00000595548 NACADO15069 1562 aa32.03■■■□□ 2.72
KHSRP-207ENST00000595548 DCAF8L2P0C7V8 631 aa32.03■■■□□ 2.72
KHSRP-207ENST00000595548 ZCCHC6Q5VYS8 1495 aaKnown RBP32.03■■■□□ 2.72
KHSRP-207ENST00000595548 MYO15BQ96JP2 1530 aa31.89■■■□□ 2.7
KHSRP-207ENST00000595548 DCAF1Q9Y4B6 1507 aa31.8■■■□□ 2.68
KHSRP-207ENST00000595548 UNC13AQ9UPW8 1703 aa31.21■■■□□ 2.59
KHSRP-207ENST00000595548 SCRIBQ14160 1630 aa31.12■■■□□ 2.57
KHSRP-207ENST00000595548 PABPN1Q86U42 306 aaKnown RBP eCLIP30.98■■■□□ 2.55
KHSRP-207ENST00000595548 BICRAQ9NZM4 1560 aa30.95■■■□□ 2.54
KHSRP-207ENST00000595548 SHROOM4Q9ULL8 1493 aa30.8■■■□□ 2.52
KHSRP-207ENST00000595548 DNAJC5BQ9UF47 199 aa30.6■■■□□ 2.49
KHSRP-207ENST00000595548 EIF4G1Q04637 1599 aaKnown RBP30.19■■■□□ 2.42
KHSRP-207ENST00000595548 CC2D2AQ9P2K1 1620 aa30.01■■■□□ 2.39
KHSRP-207ENST00000595548 CECR2Q9BXF3 1484 aa29.83■■■□□ 2.37
KHSRP-207ENST00000595548 BAZ1AQ9NRL2 1556 aaPredicted RBP29.8■■■□□ 2.36
KHSRP-207ENST00000595548 SMARCA4P51532 1647 aa29.77■■■□□ 2.36
KHSRP-207ENST00000595548 SMARCA2P51531 1590 aa29.6■■■□□ 2.33
KHSRP-207ENST00000595548 MROH2BQ7Z745 1585 aa29.56■■■□□ 2.32
KHSRP-207ENST00000595548 ATAD2BQ9ULI0 1458 aa29.55■■■□□ 2.32
KHSRP-207ENST00000595548 NCAPD3P42695 1498 aa29.51■■■□□ 2.31
KHSRP-207ENST00000595548 PEG3Q9GZU2 1588 aa29.47■■■□□ 2.31
KHSRP-207ENST00000595548 HMGXB3Q12766 1538 aa29.43■■■□□ 2.3
KHSRP-207ENST00000595548 BAZ1BQ9UIG0 1483 aaKnown RBP29.37■■■□□ 2.29
KHSRP-207ENST00000595548 RSF1Q96T23 1441 aaPredicted RBP29.28■■■□□ 2.28
KHSRP-207ENST00000595548 WIZO95785 1651 aa29.25■■■□□ 2.27
KHSRP-207ENST00000595548 TOP2AP11388 1531 aaKnown RBP29.02■■■□□ 2.24
KHSRP-207ENST00000595548 LAMC3Q9Y6N6 1575 aa28.75■■■□□ 2.19
KHSRP-207ENST00000595548 SUPT5HO00267 1087 aaKnown RBP28.71■■■□□ 2.19
KHSRP-207ENST00000595548 NESP48681 1621 aa28.71■■■□□ 2.19
KHSRP-207ENST00000595548 CADPSQ9ULU8 1353 aa28.67■■■□□ 2.18
KHSRP-207ENST00000595548 ERCC6Q03468 1493 aa28.66■■■□□ 2.18
KHSRP-207ENST00000595548 CCDC88BA6NC98 1476 aa28.61■■■□□ 2.17
KHSRP-207ENST00000595548 PDS5BQ9NTI5 1447 aa28.58■■■□□ 2.17
KHSRP-207ENST00000595548 CFTRP13569 1480 aa28.53■■■□□ 2.16
KHSRP-207ENST00000595548 KIF21AQ7Z4S6 1674 aa28.42■■■□□ 2.14
KHSRP-207ENST00000595548 PRDM2Q13029 1718 aa28.38■■■□□ 2.13
KHSRP-207ENST00000595548 FANCD2Q9BXW9 1451 aa28.36■■■□□ 2.13
KHSRP-207ENST00000595548 CEP164Q9UPV0 1460 aa28.34■■■□□ 2.13
KHSRP-207ENST00000595548 THOC2Q8NI27 1593 aaKnown RBP28.28■■■□□ 2.12
KHSRP-207ENST00000595548 CUX2O14529 1486 aa28.27■■■□□ 2.12
KHSRP-207ENST00000595548 MRC2Q9UBG0 1479 aa28.26■■■□□ 2.11
KHSRP-207ENST00000595548 WDR62O43379 1518 aa28.13■■■□□ 2.09
KHSRP-207ENST00000595548 DNAJC5Q9H3Z4 198 aa28.03■■■□□ 2.08
KHSRP-207ENST00000595548 URB2Q14146 1524 aaKnown RBP28.02■■■□□ 2.08
KHSRP-207ENST00000595548 ABCC8Q09428 1581 aa27.99■■■□□ 2.07
KHSRP-207ENST00000595548 DNMBPQ6XZF7 1577 aa27.92■■■□□ 2.06
KHSRP-207ENST00000595548 TOPBP1Q92547 1522 aa27.91■■■□□ 2.06
KHSRP-207ENST00000595548 IFT140Q96RY7 1462 aa27.74■■■□□ 2.03
KHSRP-207ENST00000595548 CUX1P39880 1505 aa27.73■■■□□ 2.03
KHSRP-207ENST00000595548 POLA1P09884 1462 aaPredicted RBP27.68■■■□□ 2.02
KHSRP-207ENST00000595548 WRNQ14191 1432 aaPredicted RBP eCLIP27.67■■■□□ 2.02
KHSRP-207ENST00000595548 FGD5Q6ZNL6 1462 aa27.65■■■□□ 2.02
KHSRP-207ENST00000595548 SOGA1O94964 1423 aa27.58■■■□□ 2.01
KHSRP-207ENST00000595548 TOP2BQ02880 1626 aa27.58■■■□□ 2.01
KHSRP-207ENST00000595548 BIVM-ERCC5R4GMW8 1640 aa27.57■■■□□ 2
KHSRP-207ENST00000595548 TARBP1Q13395 1621 aaKnown RBP27.56■■■□□ 2
KHSRP-207ENST00000595548 SYNJ1O43426 1573 aa27.54■■■□□ 2
KHSRP-207ENST00000595548 RAD54L2Q9Y4B4 1467 aa27.52■■■□□ 2
KHSRP-207ENST00000595548 ZNF608Q9ULD9 1512 aaPredicted RBP27.51■■□□□ 1.99
KHSRP-207ENST00000595548 EIF4G3O43432 1585 aaKnown RBP27.48■■□□□ 1.99
KHSRP-207ENST00000595548 WDR97A6NE52 1622 aa27.46■■□□□ 1.99
KHSRP-207ENST00000595548 ABCA10Q8WWZ4 1543 aa27.39■■□□□ 1.98
KHSRP-207ENST00000595548 AQRO60306 1485 aaKnown RBP eCLIP27.38■■□□□ 1.977e-8■■■■■ 29.1
KHSRP-207ENST00000595548 TDRD9Q8NDG6 1382 aaKnown RBP27.37■■□□□ 1.97
KHSRP-207ENST00000595548 GAPVD1Q14C86 1478 aa27.28■■□□□ 1.96
KHSRP-207ENST00000595548 GRIN2BQ13224 1484 aa27.27■■□□□ 1.96
KHSRP-207ENST00000595548 ABCA5Q8WWZ7 1642 aa27.26■■□□□ 1.95
KHSRP-207ENST00000595548 PBRM1Q86U86 1689 aa27.21■■□□□ 1.95
KHSRP-207ENST00000595548 MAGI1Q96QZ7 1491 aaPredicted RBP27.19■■□□□ 1.94
KHSRP-207ENST00000595548 SNAPC4Q5SXM2 1469 aa27.19■■□□□ 1.94
KHSRP-207ENST00000595548 TRIM41Q8WV44 630 aa27.14■■□□□ 1.94
KHSRP-207ENST00000595548 KIF27Q86VH2 1401 aa27.11■■□□□ 1.93
KHSRP-207ENST00000595548 OSCARQ8IYS5 282 aa27.11■■□□□ 1.93
KHSRP-207ENST00000595548 FBLN2P98095 1184 aa27.1■■□□□ 1.93
KHSRP-207ENST00000595548 ERICH3Q5RHP9 1530 aa27.1■■□□□ 1.93
KHSRP-207ENST00000595548 CHD1O14646 1710 aa27.08■■□□□ 1.93
KHSRP-207ENST00000595548 SYNJ2O15056 1496 aa27.06■■□□□ 1.92
KHSRP-207ENST00000595548 CHMP7Q8WUX9 453 aaPredicted RBP27.06■■□□□ 1.92
KHSRP-207ENST00000595548 ADAMTS12P58397 1594 aa27.01■■□□□ 1.92
KHSRP-207ENST00000595548 FHAD1B1AJZ9 1412 aa26.99■■□□□ 1.91
KHSRP-207ENST00000595548 GRIN2AQ12879 1464 aa26.91■■□□□ 1.9
KHSRP-207ENST00000595548 CUL7Q14999 1698 aa26.91■■□□□ 1.9
KHSRP-207ENST00000595548 IGF1RP08069 1367 aa26.88■■□□□ 1.89
KHSRP-207ENST00000595548 CHIC1Q5VXU3 224 aa26.84■■□□□ 1.89
KHSRP-207ENST00000595548 CARMIL1Q5VZK9 1371 aa26.78■■□□□ 1.88
KHSRP-207ENST00000595548 CLASP1Q7Z460 1538 aa26.78■■□□□ 1.88
KHSRP-207ENST00000595548 RUSC2Q8N2Y8 1516 aa26.77■■□□□ 1.88
KHSRP-207ENST00000595548 NUP160Q12769 1436 aa26.75■■□□□ 1.87
KHSRP-207ENST00000595548 CEP170Q5SW79 1584 aa26.73■■□□□ 1.87
KHSRP-207ENST00000595548 EEA1Q15075 1411 aa26.73■■□□□ 1.87
KHSRP-207ENST00000595548 RAPGEF2Q9Y4G8 1499 aa26.66■■□□□ 1.86
KHSRP-207ENST00000595548 ARHGEF11O15085 1522 aa26.65■■□□□ 1.86
KHSRP-207ENST00000595548 RIMBP3CA6NJZ7 1639 aa26.63■■□□□ 1.85
KHSRP-207ENST00000595548 RIMBP3BA6NNM3 1639 aa26.63■■□□□ 1.85
KHSRP-207ENST00000595548 RIMBP3Q9UFD9 1639 aa26.63■■□□□ 1.85
KHSRP-207ENST00000595548 CSRNP3Q8WYN3 585 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms