RNA–Protein interactions for RNA: ENST00000624390.1

LINC00963-219, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 472 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-219ENST00000624390 NISCHQ9Y2I1 1504 aa20.03■□□□□ 0.8
LINC00963-219ENST00000624390 CCDC180Q9P1Z9 1646 aa17.67■□□□□ 0.42
LINC00963-219ENST00000624390 ABCC9O60706 1549 aa17.52■□□□□ 0.39
LINC00963-219ENST00000624390 DCAF8L2P0C7V8 631 aa17.02■□□□□ 0.32
LINC00963-219ENST00000624390 RB1CC1Q8TDY2 1594 aa16.75■□□□□ 0.27
LINC00963-219ENST00000624390 NACADO15069 1562 aa16.72■□□□□ 0.27
LINC00963-219ENST00000624390 ZCCHC6Q5VYS8 1495 aaKnown RBP16.65■□□□□ 0.26
LINC00963-219ENST00000624390 MYO15BQ96JP2 1530 aa16.57■□□□□ 0.24
LINC00963-219ENST00000624390 DCAF1Q9Y4B6 1507 aa16.51■□□□□ 0.23
LINC00963-219ENST00000624390 PABPN1Q86U42 306 aaKnown RBP eCLIP16.47■□□□□ 0.23
LINC00963-219ENST00000624390 SCRIBQ14160 1630 aa16.26■□□□□ 0.19
LINC00963-219ENST00000624390 UNC13AQ9UPW8 1703 aa16.21■□□□□ 0.19
LINC00963-219ENST00000624390 BICRAQ9NZM4 1560 aa16.2■□□□□ 0.18
LINC00963-219ENST00000624390 DNAJC5BQ9UF47 199 aa16.14■□□□□ 0.17
LINC00963-219ENST00000624390 SHROOM4Q9ULL8 1493 aa16.01■□□□□ 0.15
LINC00963-219ENST00000624390 EIF4G1Q04637 1599 aaKnown RBP15.81■□□□□ 0.12
LINC00963-219ENST00000624390 CC2D2AQ9P2K1 1620 aa15.75■□□□□ 0.11
LINC00963-219ENST00000624390 CECR2Q9BXF3 1484 aa15.72■□□□□ 0.11
LINC00963-219ENST00000624390 BAZ1AQ9NRL2 1556 aaPredicted RBP15.51■□□□□ 0.07
LINC00963-219ENST00000624390 SMARCA4P51532 1647 aa15.5■□□□□ 0.07
LINC00963-219ENST00000624390 ATAD2BQ9ULI0 1458 aa15.49■□□□□ 0.07
LINC00963-219ENST00000624390 NCAPD3P42695 1498 aa15.47■□□□□ 0.07
LINC00963-219ENST00000624390 MROH2BQ7Z745 1585 aa15.45■□□□□ 0.06
LINC00963-219ENST00000624390 SMARCA2P51531 1590 aa15.43■□□□□ 0.06
LINC00963-219ENST00000624390 BAZ1BQ9UIG0 1483 aaKnown RBP15.37■□□□□ 0.05
LINC00963-219ENST00000624390 HMGXB3Q12766 1538 aa15.33■□□□□ 0.04
LINC00963-219ENST00000624390 RSF1Q96T23 1441 aaPredicted RBP15.31■□□□□ 0.04
LINC00963-219ENST00000624390 PEG3Q9GZU2 1588 aa15.31■□□□□ 0.04
LINC00963-219ENST00000624390 WIZO95785 1651 aa15.25■□□□□ 0.03
LINC00963-219ENST00000624390 NESP48681 1621 aa15.14■□□□□ 0.01
LINC00963-219ENST00000624390 ERCC6Q03468 1493 aa15.12■□□□□ 0.01
LINC00963-219ENST00000624390 SUPT5HO00267 1087 aaKnown RBP15.1■□□□□ 0.01
LINC00963-219ENST00000624390 TOP2AP11388 1531 aaKnown RBP15.09■□□□□ 0.01
LINC00963-219ENST00000624390 CADPSQ9ULU8 1353 aa15.08■□□□□ 0
LINC00963-219ENST00000624390 PDS5BQ9NTI5 1447 aa15.01□□□□□ -0.01
LINC00963-219ENST00000624390 LAMC3Q9Y6N6 1575 aa15.01□□□□□ -0.01
LINC00963-219ENST00000624390 CCDC88BA6NC98 1476 aa14.98□□□□□ -0.01
LINC00963-219ENST00000624390 AEBP2Q6ZN18 517 aaPredicted RBP14.95□□□□□ -0.02
LINC00963-219ENST00000624390 CFTRP13569 1480 aa14.93□□□□□ -0.02
LINC00963-219ENST00000624390 FANCD2Q9BXW9 1451 aa14.88□□□□□ -0.03
LINC00963-219ENST00000624390 CUX2O14529 1486 aa14.87□□□□□ -0.03
LINC00963-219ENST00000624390 CEP164Q9UPV0 1460 aa14.84□□□□□ -0.03
LINC00963-219ENST00000624390 KIF21AQ7Z4S6 1674 aa14.82□□□□□ -0.04
LINC00963-219ENST00000624390 MRC2Q9UBG0 1479 aa14.82□□□□□ -0.04
LINC00963-219ENST00000624390 THOC2Q8NI27 1593 aaKnown RBP14.78□□□□□ -0.04
LINC00963-219ENST00000624390 WDR62O43379 1518 aa14.71□□□□□ -0.06
LINC00963-219ENST00000624390 URB2Q14146 1524 aaKnown RBP14.7□□□□□ -0.06
LINC00963-219ENST00000624390 TOPBP1Q92547 1522 aa14.61□□□□□ -0.07
LINC00963-219ENST00000624390 ABCC8Q09428 1581 aa14.61□□□□□ -0.07
LINC00963-219ENST00000624390 PRDM2Q13029 1718 aa14.61□□□□□ -0.07
LINC00963-219ENST00000624390 DNMBPQ6XZF7 1577 aa14.56□□□□□ -0.08
LINC00963-219ENST00000624390 DNAJC5Q9H3Z4 198 aa14.54□□□□□ -0.08
LINC00963-219ENST00000624390 IFT140Q96RY7 1462 aa14.54□□□□□ -0.08
LINC00963-219ENST00000624390 SOGA1O94964 1423 aa14.5□□□□□ -0.09
LINC00963-219ENST00000624390 CUX1P39880 1505 aa14.49□□□□□ -0.09
LINC00963-219ENST00000624390 ZNF608Q9ULD9 1512 aaPredicted RBP14.49□□□□□ -0.09
LINC00963-219ENST00000624390 POLA1P09884 1462 aaPredicted RBP14.49□□□□□ -0.09
LINC00963-219ENST00000624390 RAD54L2Q9Y4B4 1467 aa14.48□□□□□ -0.09
LINC00963-219ENST00000624390 FGD5Q6ZNL6 1462 aa14.46□□□□□ -0.09
LINC00963-219ENST00000624390 AQRO60306 1485 aaKnown RBP eCLIP14.45□□□□□ -0.1
LINC00963-219ENST00000624390 WRNQ14191 1432 aaPredicted RBP eCLIP14.45□□□□□ -0.1
LINC00963-219ENST00000624390 TDRD9Q8NDG6 1382 aaKnown RBP14.45□□□□□ -0.1
LINC00963-219ENST00000624390 FBLN2P98095 1184 aa14.4□□□□□ -0.1
LINC00963-219ENST00000624390 OSCARQ8IYS5 282 aa14.4□□□□□ -0.1
LINC00963-219ENST00000624390 TARBP1Q13395 1621 aaKnown RBP14.38□□□□□ -0.11
LINC00963-219ENST00000624390 SYNJ1O43426 1573 aa14.34□□□□□ -0.11
LINC00963-219ENST00000624390 EIF4G3O43432 1585 aaKnown RBP14.34□□□□□ -0.11
LINC00963-219ENST00000624390 CHMP7Q8WUX9 453 aaPredicted RBP14.32□□□□□ -0.12
LINC00963-219ENST00000624390 TOP2BQ02880 1626 aa14.32□□□□□ -0.12
LINC00963-219ENST00000624390 GAPVD1Q14C86 1478 aa14.3□□□□□ -0.12
LINC00963-219ENST00000624390 ABCA10Q8WWZ4 1543 aa14.3□□□□□ -0.12
LINC00963-219ENST00000624390 GRIN2BQ13224 1484 aa14.29□□□□□ -0.12
LINC00963-219ENST00000624390 BIVM-ERCC5R4GMW8 1640 aa14.27□□□□□ -0.12
LINC00963-219ENST00000624390 SNAPC4Q5SXM2 1469 aa14.26□□□□□ -0.13
LINC00963-219ENST00000624390 WDR97A6NE52 1622 aa14.23□□□□□ -0.13
LINC00963-219ENST00000624390 TRIM41Q8WV44 630 aa14.23□□□□□ -0.13
LINC00963-219ENST00000624390 MAGI1Q96QZ7 1491 aaPredicted RBP14.21□□□□□ -0.13
LINC00963-219ENST00000624390 SYNJ2O15056 1496 aa14.18□□□□□ -0.14
LINC00963-219ENST00000624390 ABCA5Q8WWZ7 1642 aa14.17□□□□□ -0.14
LINC00963-219ENST00000624390 KIF27Q86VH2 1401 aa14.16□□□□□ -0.14
LINC00963-219ENST00000624390 FHAD1B1AJZ9 1412 aa14.14□□□□□ -0.15
LINC00963-219ENST00000624390 IGF1RP08069 1367 aa14.12□□□□□ -0.15
LINC00963-219ENST00000624390 CHD1O14646 1710 aa14.12□□□□□ -0.15
LINC00963-219ENST00000624390 ERICH3Q5RHP9 1530 aa14.11□□□□□ -0.15
LINC00963-219ENST00000624390 PBRM1Q86U86 1689 aa14.11□□□□□ -0.15
LINC00963-219ENST00000624390 GRIN2AQ12879 1464 aa14.08□□□□□ -0.16
LINC00963-219ENST00000624390 CYB5RLQ6IPT4 315 aa14.07□□□□□ -0.16
LINC00963-219ENST00000624390 ADAMTS12P58397 1594 aa14.06□□□□□ -0.16
LINC00963-219ENST00000624390 CARMIL1Q5VZK9 1371 aa14.05□□□□□ -0.16
LINC00963-219ENST00000624390 ARHGEF11O15085 1522 aa14.04□□□□□ -0.16
LINC00963-219ENST00000624390 RUSC2Q8N2Y8 1516 aa14.03□□□□□ -0.16
LINC00963-219ENST00000624390 CHIC1Q5VXU3 224 aa14.02□□□□□ -0.17
LINC00963-219ENST00000624390 RIMBP3CA6NJZ7 1639 aa14.01□□□□□ -0.17
LINC00963-219ENST00000624390 RIMBP3BA6NNM3 1639 aa14.01□□□□□ -0.17
LINC00963-219ENST00000624390 RIMBP3Q9UFD9 1639 aa14.01□□□□□ -0.17
LINC00963-219ENST00000624390 CLASP1Q7Z460 1538 aa14□□□□□ -0.17
LINC00963-219ENST00000624390 NUP160Q12769 1436 aa14□□□□□ -0.17
LINC00963-219ENST00000624390 FAM9AQ8IZU1 332 aaPredicted RBP13.99□□□□□ -0.17
LINC00963-219ENST00000624390 JPH4Q96JJ6 628 aa13.99□□□□□ -0.17
LINC00963-219ENST00000624390 CEP170Q5SW79 1584 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms