RNA–Protein interactions for RNA: ENST00000287263.8

RAB11FIP1-201, Transcript of RAB11 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11FIP1, Length 6,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-201ENST00000287263 DCAF8L2P0C7V8 631 aa25.48■■□□□ 1.67
RAB11FIP1-201ENST00000287263 EHMT2Q96KQ7 1210 aa23.86■■□□□ 1.41
RAB11FIP1-201ENST00000287263 SUPT5HO00267 1087 aaKnown RBP23.76■■□□□ 1.39
RAB11FIP1-201ENST00000287263 SHROOM4Q9ULL8 1493 aa23.39■■□□□ 1.34
RAB11FIP1-201ENST00000287263 PELP1Q8IZL8 1130 aaKnown RBP23.38■■□□□ 1.33
RAB11FIP1-201ENST00000287263 TTBK1Q5TCY1 1321 aaPredicted RBP22.94■■□□□ 1.26
RAB11FIP1-201ENST00000287263 ERICH6Q7L0X2 663 aa22.88■■□□□ 1.25
RAB11FIP1-201ENST00000287263 MYT1Q01538 1121 aa22.78■■□□□ 1.24
RAB11FIP1-201ENST00000287263 RANGAP1P46060 587 aaPredicted RBP22.68■■□□□ 1.22
RAB11FIP1-201ENST00000287263 FAM9AQ8IZU1 332 aaPredicted RBP22.68■■□□□ 1.22
RAB11FIP1-201ENST00000287263 APLP2Q06481 763 aa22.56■■□□□ 1.2
RAB11FIP1-201ENST00000287263 NISCHQ9Y2I1 1504 aa22.51■■□□□ 1.19
RAB11FIP1-201ENST00000287263 CENPBP07199 599 aaPredicted RBP22.38■■□□□ 1.17
RAB11FIP1-201ENST00000287263 PCGF6Q9BYE7 350 aa22.36■■□□□ 1.17
RAB11FIP1-201ENST00000287263 ATP1B4Q9UN42 357 aaPredicted RBP22.34■■□□□ 1.17
RAB11FIP1-201ENST00000287263 CCER1Q8TC90 406 aaPredicted RBP22.27■■□□□ 1.16
RAB11FIP1-201ENST00000287263 YTHDC1Q96MU7 727 aaKnown RBP22.19■■□□□ 1.14
RAB11FIP1-201ENST00000287263 PPARGC1BQ86YN6 1023 aaKnown RBP21.79■■□□□ 1.08
RAB11FIP1-201ENST00000287263 NEFLP07196 543 aa21.76■■□□□ 1.07
RAB11FIP1-201ENST00000287263 UBTFP17480 764 aaKnown RBP21.71■■□□□ 1.07
RAB11FIP1-201ENST00000287263 TRIM41Q8WV44 630 aa21.69■■□□□ 1.06
RAB11FIP1-201ENST00000287263 ZEB1P37275 1124 aaPredicted RBP21.61■■□□□ 1.05
RAB11FIP1-201ENST00000287263 CHIC1Q5VXU3 224 aa21.61■■□□□ 1.05
RAB11FIP1-201ENST00000287263 MYT1LQ9UL68 1186 aa21.6■■□□□ 1.05
RAB11FIP1-201ENST00000287263 CNGB1Q14028 1251 aaPredicted RBP21.52■■□□□ 1.04
RAB11FIP1-201ENST00000287263 POLR3GLQ9BT43 218 aa21.48■■□□□ 1.03
RAB11FIP1-201ENST00000287263 ITGAEP38570 1179 aa21.42■■□□□ 1.02
RAB11FIP1-201ENST00000287263 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.41■■□□□ 1.02
RAB11FIP1-201ENST00000287263 HNRNPUL2Q1KMD3 747 aaKnown RBP21.41■■□□□ 1.02
RAB11FIP1-201ENST00000287263 DAXXQ9UER7 740 aaPredicted RBP21.35■■□□□ 1.01
RAB11FIP1-201ENST00000287263 HRCP23327 699 aa21.2■□□□□ 0.98
RAB11FIP1-201ENST00000287263 RTL5Q5HYW3 569 aaPredicted RBP21.2■□□□□ 0.98
RAB11FIP1-201ENST00000287263 SLC4A1APQ9BWU0 796 aaKnown RBP21.16■□□□□ 0.98
RAB11FIP1-201ENST00000287263 EIF5BO60841 1220 aaKnown RBP20.93■□□□□ 0.94
RAB11FIP1-201ENST00000287263 BCANQ96GW7 911 aa20.93■□□□□ 0.94
RAB11FIP1-201ENST00000287263 GTF3C3Q9Y5Q9 886 aa20.92■□□□□ 0.94
RAB11FIP1-201ENST00000287263 ZNF316A6NFI3 1004 aaPredicted RBP20.91■□□□□ 0.94
RAB11FIP1-201ENST00000287263 LOC105371045A0A1W2PR82 267 aa20.84■□□□□ 0.93
RAB11FIP1-201ENST00000287263 TRIM26Q12899 539 aaPredicted RBP20.74■□□□□ 0.91
RAB11FIP1-201ENST00000287263 BCL11AQ9H165 835 aa20.68■□□□□ 0.9
RAB11FIP1-201ENST00000287263 DIEXFQ68CQ4 756 aaKnown RBP20.66■□□□□ 0.9
RAB11FIP1-201ENST00000287263 CLSPNQ9HAW4 1339 aa20.62■□□□□ 0.89
RAB11FIP1-201ENST00000287263 FAM50AQ14320 339 aaKnown RBP20.61■□□□□ 0.89
RAB11FIP1-201ENST00000287263 PABPN1Q86U42 306 aaKnown RBP eCLIP20.57■□□□□ 0.88
RAB11FIP1-201ENST00000287263 SLC24A1O60721 1099 aa20.57■□□□□ 0.88
RAB11FIP1-201ENST00000287263 TRIM52Q96A61 297 aa20.55■□□□□ 0.88
RAB11FIP1-201ENST00000287263 FBLN2P98095 1184 aa20.55■□□□□ 0.88
RAB11FIP1-201ENST00000287263 ZNF326Q5BKZ1 582 aaKnown RBP20.53■□□□□ 0.88
RAB11FIP1-201ENST00000287263 NEUROD1Q13562 356 aa20.52■□□□□ 0.87
RAB11FIP1-201ENST00000287263 ARID3CA6NKF2 412 aa20.49■□□□□ 0.87
RAB11FIP1-201ENST00000287263 PLPPR3Q6T4P5 718 aa20.45■□□□□ 0.86
RAB11FIP1-201ENST00000287263 CDK11AQ9UQ88 783 aaPredicted RBP20.42■□□□□ 0.86
RAB11FIP1-201ENST00000287263 GLIPR1L2Q4G1C9 344 aa20.38■□□□□ 0.85
RAB11FIP1-201ENST00000287263 ACIN1Q9UKV3 1341 aaKnown RBP20.31■□□□□ 0.84
RAB11FIP1-201ENST00000287263 NPM2Q86SE8 214 aaKnown RBP20.27■□□□□ 0.83
RAB11FIP1-201ENST00000287263 P3H3Q8IVL6 736 aa20.23■□□□□ 0.83
RAB11FIP1-201ENST00000287263 NBR1Q14596 966 aa20.22■□□□□ 0.83
RAB11FIP1-201ENST00000287263 ABCC9O60706 1549 aa20.22■□□□□ 0.83
RAB11FIP1-201ENST00000287263 ANP32AP39687 249 aaKnown RBP20.13■□□□□ 0.81
RAB11FIP1-201ENST00000287263 ARXQ96QS3 562 aa20.1■□□□□ 0.81
RAB11FIP1-201ENST00000287263 ZNF777Q9ULD5 760 aaPredicted RBP20.1■□□□□ 0.81
RAB11FIP1-201ENST00000287263 ZBTB47Q9UFB7 747 aaPredicted RBP20.08■□□□□ 0.8
RAB11FIP1-201ENST00000287263 CANXP27824 592 aaKnown RBP20.07■□□□□ 0.8
RAB11FIP1-201ENST00000287263 SENP3Q9H4L4 574 aaPredicted RBP19.99■□□□□ 0.79
RAB11FIP1-201ENST00000287263 SCAF1Q9H7N4 1312 aaKnown RBP19.99■□□□□ 0.79
RAB11FIP1-201ENST00000287263 CHGAP10645 457 aaKnown RBP19.94■□□□□ 0.78
RAB11FIP1-201ENST00000287263 FKBP8Q14318 412 aa19.94■□□□□ 0.78
RAB11FIP1-201ENST00000287263 PLEKHG5O94827 1062 aa19.92■□□□□ 0.78
RAB11FIP1-201ENST00000287263 ANP32CO43423 234 aa19.92■□□□□ 0.78
RAB11FIP1-201ENST00000287263 RTN4Q9NQC3 1192 aaKnown RBP19.91■□□□□ 0.78
RAB11FIP1-201ENST00000287263 ANP32BQ92688 251 aaKnown RBP19.85■□□□□ 0.77
RAB11FIP1-201ENST00000287263 ESF1Q9H501 851 aaKnown RBP19.84■□□□□ 0.77
RAB11FIP1-201ENST00000287263 NEFMP07197 916 aa19.84■□□□□ 0.77
RAB11FIP1-201ENST00000287263 STAG3Q9UJ98 1225 aa19.83■□□□□ 0.76
RAB11FIP1-201ENST00000287263 A0A0G2JS52 829 aa19.8■□□□□ 0.76
RAB11FIP1-201ENST00000287263 SALL2Q9Y467 1007 aaPredicted RBP19.78■□□□□ 0.76
RAB11FIP1-201ENST00000287263 AMER1Q5JTC6 1135 aaPredicted RBP19.75■□□□□ 0.75
RAB11FIP1-201ENST00000287263 ANP32EQ9BTT0 268 aa19.71■□□□□ 0.75
RAB11FIP1-201ENST00000287263 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.68■□□□□ 0.741e-6■■□□□ 14.4
RAB11FIP1-201ENST00000287263 ZBTB7CA1YPR0 619 aa19.67■□□□□ 0.74
RAB11FIP1-201ENST00000287263 HSP90AA1P07900 732 aaKnown RBP19.63■□□□□ 0.73
RAB11FIP1-201ENST00000287263 CHIC2Q9UKJ5 165 aa19.59■□□□□ 0.73
RAB11FIP1-201ENST00000287263 IRX6P78412 446 aaPredicted RBP19.55■□□□□ 0.72
RAB11FIP1-201ENST00000287263 FAM9BQ8IZU0 186 aa19.54■□□□□ 0.72
RAB11FIP1-201ENST00000287263 NAP1L5Q96NT1 182 aaPredicted RBP19.52■□□□□ 0.71
RAB11FIP1-201ENST00000287263 NPM1P06748 294 aaKnown RBP eCLIP19.5■□□□□ 0.71
RAB11FIP1-201ENST00000287263 KDM2AQ9Y2K7 1162 aa19.5■□□□□ 0.71
RAB11FIP1-201ENST00000287263 TNNT2P45379 298 aaPredicted RBP19.49■□□□□ 0.71
RAB11FIP1-201ENST00000287263 SENP3-EIF4A1A0A087X0R7 540 aa19.48■□□□□ 0.71
RAB11FIP1-201ENST00000287263 C14orf37Q86TY3 774 aa19.47■□□□□ 0.71
RAB11FIP1-201ENST00000287263 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.47■□□□□ 0.71
RAB11FIP1-201ENST00000287263 HNRNPUQ00839 825 aaKnown RBP eCLIP19.41■□□□□ 0.7
RAB11FIP1-201ENST00000287263 CDK11BP21127 795 aaKnown RBP19.41■□□□□ 0.7
RAB11FIP1-201ENST00000287263 HIRIP3Q9BW71 556 aaPredicted RBP19.41■□□□□ 0.7
RAB11FIP1-201ENST00000287263 DDX10Q13206 875 aaKnown RBP19.39■□□□□ 0.69
RAB11FIP1-201ENST00000287263 TRIM44Q96DX7 344 aaPredicted RBP19.39■□□□□ 0.69
RAB11FIP1-201ENST00000287263 ARID4BQ4LE39 1312 aaPredicted RBP19.39■□□□□ 0.69
RAB11FIP1-201ENST00000287263 CSRNP3Q8WYN3 585 aa19.38■□□□□ 0.69
RAB11FIP1-201ENST00000287263 CCDC136Q96JN2 1154 aa19.38■□□□□ 0.69
RAB11FIP1-201ENST00000287263 UPF2Q9HAU5 1272 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms