RNA–Protein interactions for RNA: ENST00000426559.6

STMN1-204, Transcript of stathmin 1, humanhuman

TSL 1 (best) BASIC

Gene STMN1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STMN1-204ENST00000426559 NISCHQ9Y2I1 1504 aa39.37■■■■□ 3.89
STMN1-204ENST00000426559 ABCC9O60706 1549 aa35.3■■■■□ 3.24
STMN1-204ENST00000426559 CCDC180Q9P1Z9 1646 aa35.28■■■■□ 3.24
STMN1-204ENST00000426559 RB1CC1Q8TDY2 1594 aa33.55■■■□□ 2.96
STMN1-204ENST00000426559 NACADO15069 1562 aa33.34■■■□□ 2.93
STMN1-204ENST00000426559 DCAF8L2P0C7V8 631 aa33.22■■■□□ 2.91
STMN1-204ENST00000426559 DNAJC5BQ9UF47 199 aa33.15■■■□□ 2.9
STMN1-204ENST00000426559 PABPN1Q86U42 306 aaKnown RBP eCLIP32.89■■■□□ 2.86
STMN1-204ENST00000426559 UNC13AQ9UPW8 1703 aa32.88■■■□□ 2.85
STMN1-204ENST00000426559 MYO15BQ96JP2 1530 aa32.88■■■□□ 2.85
STMN1-204ENST00000426559 BICRAQ9NZM4 1560 aa32.66■■■□□ 2.82
STMN1-204ENST00000426559 ZCCHC6Q5VYS8 1495 aaKnown RBP32.64■■■□□ 2.82
STMN1-204ENST00000426559 DCAF1Q9Y4B6 1507 aa32.48■■■□□ 2.79
STMN1-204ENST00000426559 SCRIBQ14160 1630 aa32.19■■■□□ 2.74
STMN1-204ENST00000426559 SHROOM4Q9ULL8 1493 aa32.1■■■□□ 2.73
STMN1-204ENST00000426559 CC2D2AQ9P2K1 1620 aa31.88■■■□□ 2.69
STMN1-204ENST00000426559 EIF4G1Q04637 1599 aaKnown RBP31.81■■■□□ 2.68
STMN1-204ENST00000426559 CECR2Q9BXF3 1484 aa31.77■■■□□ 2.68
STMN1-204ENST00000426559 NCAPD3P42695 1498 aa30.8■■■□□ 2.52
STMN1-204ENST00000426559 ATAD2BQ9ULI0 1458 aa30.73■■■□□ 2.51
STMN1-204ENST00000426559 SMARCA4P51532 1647 aa30.7■■■□□ 2.51
STMN1-204ENST00000426559 SMARCA2P51531 1590 aa30.6■■■□□ 2.49
STMN1-204ENST00000426559 HMGXB3Q12766 1538 aa30.55■■■□□ 2.48
STMN1-204ENST00000426559 BAZ1AQ9NRL2 1556 aaPredicted RBP30.53■■■□□ 2.48
STMN1-204ENST00000426559 ERCC6Q03468 1493 aa30.41■■■□□ 2.46
STMN1-204ENST00000426559 BAZ1BQ9UIG0 1483 aaKnown RBP30.41■■■□□ 2.46
STMN1-204ENST00000426559 PEG3Q9GZU2 1588 aa30.39■■■□□ 2.46
STMN1-204ENST00000426559 MROH2BQ7Z745 1585 aa30.37■■■□□ 2.45
STMN1-204ENST00000426559 NESP48681 1621 aa30.36■■■□□ 2.45
STMN1-204ENST00000426559 CUX2O14529 1486 aa30.34■■■□□ 2.45
STMN1-204ENST00000426559 DNAJC5Q9H3Z4 198 aa30.34■■■□□ 2.45
STMN1-204ENST00000426559 LAMC3Q9Y6N6 1575 aa30.07■■■□□ 2.4
STMN1-204ENST00000426559 THOC2Q8NI27 1593 aaKnown RBP30.01■■■□□ 2.39
STMN1-204ENST00000426559 WIZO95785 1651 aa30.01■■■□□ 2.39
STMN1-204ENST00000426559 KIF21AQ7Z4S6 1674 aa29.95■■■□□ 2.39
STMN1-204ENST00000426559 PDS5BQ9NTI5 1447 aa29.88■■■□□ 2.37
STMN1-204ENST00000426559 CADPSQ9ULU8 1353 aa29.87■■■□□ 2.37
STMN1-204ENST00000426559 RSF1Q96T23 1441 aaPredicted RBP29.74■■■□□ 2.35
STMN1-204ENST00000426559 MRC2Q9UBG0 1479 aa29.66■■■□□ 2.34
STMN1-204ENST00000426559 WDR62O43379 1518 aa29.59■■■□□ 2.33
STMN1-204ENST00000426559 TOP2AP11388 1531 aaKnown RBP29.59■■■□□ 2.33
STMN1-204ENST00000426559 CFTRP13569 1480 aa29.54■■■□□ 2.32
STMN1-204ENST00000426559 CEP164Q9UPV0 1460 aa29.54■■■□□ 2.32
STMN1-204ENST00000426559 FANCD2Q9BXW9 1451 aa29.53■■■□□ 2.32
STMN1-204ENST00000426559 URB2Q14146 1524 aaKnown RBP29.32■■■□□ 2.28
STMN1-204ENST00000426559 CCDC88BA6NC98 1476 aa29.29■■■□□ 2.28
STMN1-204ENST00000426559 PRDM2Q13029 1718 aa29.24■■■□□ 2.27
STMN1-204ENST00000426559 TRIM41Q8WV44 630 aa29.03■■■□□ 2.24
STMN1-204ENST00000426559 TOPBP1Q92547 1522 aa28.99■■■□□ 2.23
STMN1-204ENST00000426559 OSCARQ8IYS5 282 aa28.98■■■□□ 2.23
STMN1-204ENST00000426559 ZNF608Q9ULD9 1512 aaPredicted RBP28.96■■■□□ 2.23
STMN1-204ENST00000426559 IFT140Q96RY7 1462 aa28.95■■■□□ 2.22
STMN1-204ENST00000426559 DNMBPQ6XZF7 1577 aa28.87■■■□□ 2.21
STMN1-204ENST00000426559 ABCC8Q09428 1581 aa28.86■■■□□ 2.21
STMN1-204ENST00000426559 EIF4G3O43432 1585 aaKnown RBP28.77■■■□□ 2.2
STMN1-204ENST00000426559 TARBP1Q13395 1621 aaKnown RBP28.74■■■□□ 2.19
STMN1-204ENST00000426559 AQRO60306 1485 aaKnown RBP eCLIP28.7■■■□□ 2.183e-9■■■□□ 18.3
STMN1-204ENST00000426559 POLA1P09884 1462 aaPredicted RBP28.7■■■□□ 2.18
STMN1-204ENST00000426559 RIMBP3CA6NJZ7 1639 aa28.64■■■□□ 2.18
STMN1-204ENST00000426559 RIMBP3BA6NNM3 1639 aa28.64■■■□□ 2.18
STMN1-204ENST00000426559 RIMBP3Q9UFD9 1639 aa28.64■■■□□ 2.18
STMN1-204ENST00000426559 RAD54L2Q9Y4B4 1467 aa28.62■■■□□ 2.17
STMN1-204ENST00000426559 CHD1O14646 1710 aa28.57■■■□□ 2.16
STMN1-204ENST00000426559 SOGA1O94964 1423 aa28.55■■■□□ 2.16
STMN1-204ENST00000426559 ARHGEF11O15085 1522 aa28.54■■■□□ 2.16
STMN1-204ENST00000426559 FGD5Q6ZNL6 1462 aa28.53■■■□□ 2.16
STMN1-204ENST00000426559 TDRD9Q8NDG6 1382 aaKnown RBP28.52■■■□□ 2.16
STMN1-204ENST00000426559 CUX1P39880 1505 aa28.52■■■□□ 2.16
STMN1-204ENST00000426559 SUPT5HO00267 1087 aaKnown RBP28.46■■■□□ 2.15
STMN1-204ENST00000426559 FBLN2P98095 1184 aa28.46■■■□□ 2.15
STMN1-204ENST00000426559 SNAPC4Q5SXM2 1469 aa28.38■■■□□ 2.13
STMN1-204ENST00000426559 WDR97A6NE52 1622 aa28.36■■■□□ 2.13
STMN1-204ENST00000426559 CYB5RLQ6IPT4 315 aa28.34■■■□□ 2.13
STMN1-204ENST00000426559 GRIN2BQ13224 1484 aa28.28■■■□□ 2.12
STMN1-204ENST00000426559 ARAP1Q96P48 1450 aa28.28■■■□□ 2.12
STMN1-204ENST00000426559 MAGI1Q96QZ7 1491 aaPredicted RBP28.27■■■□□ 2.12
STMN1-204ENST00000426559 CHMP7Q8WUX9 453 aaPredicted RBP28.24■■■□□ 2.11
STMN1-204ENST00000426559 CLASP1Q7Z460 1538 aa28.23■■■□□ 2.11
STMN1-204ENST00000426559 PBRM1Q86U86 1689 aa28.2■■■□□ 2.11
STMN1-204ENST00000426559 GAPVD1Q14C86 1478 aa28.2■■■□□ 2.1
STMN1-204ENST00000426559 SYNJ2O15056 1496 aa28.19■■■□□ 2.1
STMN1-204ENST00000426559 ABCA10Q8WWZ4 1543 aa28.18■■■□□ 2.1
STMN1-204ENST00000426559 SYNJ1O43426 1573 aa28.17■■■□□ 2.1
STMN1-204ENST00000426559 ABCA5Q8WWZ7 1642 aa28.15■■■□□ 2.1
STMN1-204ENST00000426559 WRNQ14191 1432 aaPredicted RBP eCLIP28.05■■■□□ 2.08
STMN1-204ENST00000426559 BIVM-ERCC5R4GMW8 1640 aa28.05■■■□□ 2.08
STMN1-204ENST00000426559 TOP2BQ02880 1626 aa28.04■■■□□ 2.08
STMN1-204ENST00000426559 TRHP20396 242 aaPredicted RBP27.98■■■□□ 2.07
STMN1-204ENST00000426559 GRIN2AQ12879 1464 aa27.94■■■□□ 2.06
STMN1-204ENST00000426559 ADAMTS12P58397 1594 aa27.94■■■□□ 2.06
STMN1-204ENST00000426559 CEP170Q5SW79 1584 aa27.86■■■□□ 2.05
STMN1-204ENST00000426559 ERCC6L2Q5T890 1561 aa27.85■■■□□ 2.05
STMN1-204ENST00000426559 NUP160Q12769 1436 aa27.84■■■□□ 2.05
STMN1-204ENST00000426559 FHAD1B1AJZ9 1412 aa27.84■■■□□ 2.05
STMN1-204ENST00000426559 ERICH3Q5RHP9 1530 aa27.82■■■□□ 2.04
STMN1-204ENST00000426559 SHROOM2Q13796 1616 aa27.72■■■□□ 2.03
STMN1-204ENST00000426559 PRG4Q92954 1404 aaPredicted RBP27.58■■■□□ 2
STMN1-204ENST00000426559 JPH4Q96JJ6 628 aa27.57■■■□□ 2
STMN1-204ENST00000426559 RUSC2Q8N2Y8 1516 aa27.53■■■□□ 2
STMN1-204ENST00000426559 IGF1RP08069 1367 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms