RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 PELP1Q8IZL8 1130 aaKnown RBP21.05■□□□□ 0.96
RAB11FIP1-202ENST00000330843 DCAF8L2P0C7V8 631 aa21.04■□□□□ 0.96
RAB11FIP1-202ENST00000330843 MYT1Q01538 1121 aa20.61■□□□□ 0.89
RAB11FIP1-202ENST00000330843 ERICH6Q7L0X2 663 aa20.51■□□□□ 0.87
RAB11FIP1-202ENST00000330843 EHMT2Q96KQ7 1210 aa20.43■□□□□ 0.86
RAB11FIP1-202ENST00000330843 SUPT5HO00267 1087 aaKnown RBP20.29■□□□□ 0.84
RAB11FIP1-202ENST00000330843 CCER1Q8TC90 406 aaPredicted RBP20.04■□□□□ 0.8
RAB11FIP1-202ENST00000330843 TTBK1Q5TCY1 1321 aaPredicted RBP19.81■□□□□ 0.76
RAB11FIP1-202ENST00000330843 CENPBP07199 599 aaPredicted RBP19.81■□□□□ 0.76
RAB11FIP1-202ENST00000330843 PCGF6Q9BYE7 350 aa19.75■□□□□ 0.75
RAB11FIP1-202ENST00000330843 SHROOM4Q9ULL8 1493 aa19.66■□□□□ 0.74
RAB11FIP1-202ENST00000330843 YTHDC1Q96MU7 727 aaKnown RBP19.63■□□□□ 0.73
RAB11FIP1-202ENST00000330843 APLP2Q06481 763 aa19.57■□□□□ 0.72
RAB11FIP1-202ENST00000330843 NEFLP07196 543 aa19.43■□□□□ 0.7
RAB11FIP1-202ENST00000330843 FAM9AQ8IZU1 332 aaPredicted RBP19.36■□□□□ 0.69
RAB11FIP1-202ENST00000330843 ZEB1P37275 1124 aaPredicted RBP19.2■□□□□ 0.66
RAB11FIP1-202ENST00000330843 RANGAP1P46060 587 aaPredicted RBP19.2■□□□□ 0.66
RAB11FIP1-202ENST00000330843 DAXXQ9UER7 740 aaPredicted RBP19.17■□□□□ 0.66
RAB11FIP1-202ENST00000330843 ATP1B4Q9UN42 357 aaPredicted RBP18.98■□□□□ 0.63
RAB11FIP1-202ENST00000330843 RTL5Q5HYW3 569 aaPredicted RBP18.9■□□□□ 0.62
RAB11FIP1-202ENST00000330843 PPARGC1BQ86YN6 1023 aaKnown RBP18.85■□□□□ 0.61
RAB11FIP1-202ENST00000330843 CNGB1Q14028 1251 aaPredicted RBP18.74■□□□□ 0.59
RAB11FIP1-202ENST00000330843 ZNF316A6NFI3 1004 aaPredicted RBP18.72■□□□□ 0.59
RAB11FIP1-202ENST00000330843 POLR3GLQ9BT43 218 aa18.71■□□□□ 0.59
RAB11FIP1-202ENST00000330843 EIF5BO60841 1220 aaKnown RBP18.67■□□□□ 0.58
RAB11FIP1-202ENST00000330843 HRCP23327 699 aa18.62■□□□□ 0.57
RAB11FIP1-202ENST00000330843 UBTFP17480 764 aaKnown RBP18.55■□□□□ 0.56
RAB11FIP1-202ENST00000330843 CLSPNQ9HAW4 1339 aa18.53■□□□□ 0.56
RAB11FIP1-202ENST00000330843 TRIM41Q8WV44 630 aa18.53■□□□□ 0.56
RAB11FIP1-202ENST00000330843 GLIPR1L2Q4G1C9 344 aa18.47■□□□□ 0.55
RAB11FIP1-202ENST00000330843 BCANQ96GW7 911 aa18.45■□□□□ 0.54
RAB11FIP1-202ENST00000330843 TRIM26Q12899 539 aaPredicted RBP18.4■□□□□ 0.54
RAB11FIP1-202ENST00000330843 ITGAEP38570 1179 aa18.4■□□□□ 0.54
RAB11FIP1-202ENST00000330843 GTF3C3Q9Y5Q9 886 aa18.32■□□□□ 0.52
RAB11FIP1-202ENST00000330843 DIEXFQ68CQ4 756 aaKnown RBP18.28■□□□□ 0.52
RAB11FIP1-202ENST00000330843 SLC4A1APQ9BWU0 796 aaKnown RBP18.28■□□□□ 0.52
RAB11FIP1-202ENST00000330843 CHIC1Q5VXU3 224 aa18.19■□□□□ 0.5
RAB11FIP1-202ENST00000330843 HNRNPUL2Q1KMD3 747 aaKnown RBP18.18■□□□□ 0.5
RAB11FIP1-202ENST00000330843 BCL11AQ9H165 835 aa18.16■□□□□ 0.5
RAB11FIP1-202ENST00000330843 CDK11AQ9UQ88 783 aaPredicted RBP18.16■□□□□ 0.5
RAB11FIP1-202ENST00000330843 MYT1LQ9UL68 1186 aa18.13■□□□□ 0.49
RAB11FIP1-202ENST00000330843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.09■□□□□ 0.49
RAB11FIP1-202ENST00000330843 NISCHQ9Y2I1 1504 aa18.05■□□□□ 0.48
RAB11FIP1-202ENST00000330843 LOC105371045A0A1W2PR82 267 aa18■□□□□ 0.47
RAB11FIP1-202ENST00000330843 NPM2Q86SE8 214 aaKnown RBP18■□□□□ 0.47
RAB11FIP1-202ENST00000330843 ANP32AP39687 249 aaKnown RBP17.9■□□□□ 0.46
RAB11FIP1-202ENST00000330843 ZBTB47Q9UFB7 747 aaPredicted RBP17.87■□□□□ 0.45
RAB11FIP1-202ENST00000330843 NBR1Q14596 966 aa17.86■□□□□ 0.45
RAB11FIP1-202ENST00000330843 ARXQ96QS3 562 aa17.84■□□□□ 0.45
RAB11FIP1-202ENST00000330843 ANP32BQ92688 251 aaKnown RBP17.82■□□□□ 0.44
RAB11FIP1-202ENST00000330843 NEUROD1Q13562 356 aa17.82■□□□□ 0.44
RAB11FIP1-202ENST00000330843 SLC24A1O60721 1099 aa17.79■□□□□ 0.44
RAB11FIP1-202ENST00000330843 CANXP27824 592 aaKnown RBP17.77■□□□□ 0.44
RAB11FIP1-202ENST00000330843 ANP32CO43423 234 aa17.75■□□□□ 0.43
RAB11FIP1-202ENST00000330843 ACIN1Q9UKV3 1341 aaKnown RBP17.73■□□□□ 0.43
RAB11FIP1-202ENST00000330843 FAM50AQ14320 339 aaKnown RBP17.64■□□□□ 0.42
RAB11FIP1-202ENST00000330843 AMER1Q5JTC6 1135 aaPredicted RBP17.64■□□□□ 0.42
RAB11FIP1-202ENST00000330843 TNNT2P45379 298 aaPredicted RBP17.64■□□□□ 0.41
RAB11FIP1-202ENST00000330843 HSP90AA1P07900 732 aaKnown RBP17.64■□□□□ 0.41
RAB11FIP1-202ENST00000330843 FKBP8Q14318 412 aa17.62■□□□□ 0.41
RAB11FIP1-202ENST00000330843 ZNF326Q5BKZ1 582 aaKnown RBP17.62■□□□□ 0.41
RAB11FIP1-202ENST00000330843 TRIM52Q96A61 297 aa17.61■□□□□ 0.41
RAB11FIP1-202ENST00000330843 CDK11BP21127 795 aaKnown RBP17.54■□□□□ 0.4
RAB11FIP1-202ENST00000330843 RTN4Q9NQC3 1192 aaKnown RBP17.47■□□□□ 0.39
RAB11FIP1-202ENST00000330843 UPF2Q9HAU5 1272 aaKnown RBP17.39■□□□□ 0.37
RAB11FIP1-202ENST00000330843 SALL2Q9Y467 1007 aaPredicted RBP17.35■□□□□ 0.37
RAB11FIP1-202ENST00000330843 NAP1L5Q96NT1 182 aaPredicted RBP17.33■□□□□ 0.37
RAB11FIP1-202ENST00000330843 NEFMP07197 916 aa17.3■□□□□ 0.36
RAB11FIP1-202ENST00000330843 SCAF1Q9H7N4 1312 aaKnown RBP17.3■□□□□ 0.36
RAB11FIP1-202ENST00000330843 TRIM44Q96DX7 344 aaPredicted RBP17.3■□□□□ 0.36
RAB11FIP1-202ENST00000330843 IRX6P78412 446 aaPredicted RBP17.29■□□□□ 0.36
RAB11FIP1-202ENST00000330843 HNRNPUQ00839 825 aaKnown RBP eCLIP17.26■□□□□ 0.35
RAB11FIP1-202ENST00000330843 FAM9BQ8IZU0 186 aa17.25■□□□□ 0.35
RAB11FIP1-202ENST00000330843 CCDC136Q96JN2 1154 aa17.24■□□□□ 0.35
RAB11FIP1-202ENST00000330843 ANP32EQ9BTT0 268 aa17.24■□□□□ 0.35
RAB11FIP1-202ENST00000330843 TPRNQ4KMQ1 711 aa17.18■□□□□ 0.34
RAB11FIP1-202ENST00000330843 DNTTIP2Q5QJE6 756 aaKnown RBP17.17■□□□□ 0.34
RAB11FIP1-202ENST00000330843 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.14■□□□□ 0.33
RAB11FIP1-202ENST00000330843 ERICH6BQ5W0A0 696 aa17.1■□□□□ 0.33
RAB11FIP1-202ENST00000330843 NCLP19338 710 aaKnown RBP17.1■□□□□ 0.33
RAB11FIP1-202ENST00000330843 DDX10Q13206 875 aaKnown RBP17.09■□□□□ 0.33
RAB11FIP1-202ENST00000330843 PTMAP06454 111 aaKnown RBP17.08■□□□□ 0.32
RAB11FIP1-202ENST00000330843 ARID4BQ4LE39 1312 aaPredicted RBP17.07■□□□□ 0.32
RAB11FIP1-202ENST00000330843 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.01■□□□□ 0.31
RAB11FIP1-202ENST00000330843 LAS1LQ9Y4W2 734 aaKnown RBP17■□□□□ 0.31
RAB11FIP1-202ENST00000330843 TULP1O00294 542 aaPredicted RBP16.98■□□□□ 0.31
RAB11FIP1-202ENST00000330843 DDRGK1Q96HY6 314 aa16.97■□□□□ 0.31
RAB11FIP1-202ENST00000330843 BECN1Q14457 450 aa16.96■□□□□ 0.31
RAB11FIP1-202ENST00000330843 ARID3CA6NKF2 412 aa16.94■□□□□ 0.3
RAB11FIP1-202ENST00000330843 TMC1Q8TDI8 760 aa16.94■□□□□ 0.3
RAB11FIP1-202ENST00000330843 ARID3AQ99856 593 aa16.94■□□□□ 0.3
RAB11FIP1-202ENST00000330843 PLCB2Q00722 1185 aa16.92■□□□□ 0.3
RAB11FIP1-202ENST00000330843 SENP3-EIF4A1A0A087X0R7 540 aa16.92■□□□□ 0.3
RAB11FIP1-202ENST00000330843 TNNT3P45378 269 aaPredicted RBP16.9■□□□□ 0.3
RAB11FIP1-202ENST00000330843 GOLGA6L22H0YM25 854 aa16.9■□□□□ 0.3
RAB11FIP1-202ENST00000330843 MIER1Q8N108 512 aa16.89■□□□□ 0.29
RAB11FIP1-202ENST00000330843 ZBTB7CA1YPR0 619 aa16.88■□□□□ 0.29
RAB11FIP1-202ENST00000330843 DEKP35659 375 aaKnown RBP16.86■□□□□ 0.29
RAB11FIP1-202ENST00000330843 HIRIP3Q9BW71 556 aaPredicted RBP16.85■□□□□ 0.29
RAB11FIP1-202ENST00000330843 TAOK2Q9UL54 1235 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms