RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 NISCHQ9Y2I1 1504 aa29.45■■■□□ 2.31
LINC00963-216ENST00000623185 CCDC180Q9P1Z9 1646 aa25.91■■□□□ 1.74
LINC00963-216ENST00000623185 ABCC9O60706 1549 aa25.09■■□□□ 1.61
LINC00963-216ENST00000623185 DCAF8L2P0C7V8 631 aa24.58■■□□□ 1.53
LINC00963-216ENST00000623185 ZCCHC6Q5VYS8 1495 aaKnown RBP24.57■■□□□ 1.52
LINC00963-216ENST00000623185 MYO15BQ96JP2 1530 aa24.41■■□□□ 1.5
LINC00963-216ENST00000623185 DCAF1Q9Y4B6 1507 aa24.41■■□□□ 1.5
LINC00963-216ENST00000623185 NACADO15069 1562 aa24.39■■□□□ 1.5
LINC00963-216ENST00000623185 RB1CC1Q8TDY2 1594 aa24.29■■□□□ 1.48
LINC00963-216ENST00000623185 SCRIBQ14160 1630 aa23.66■■□□□ 1.38
LINC00963-216ENST00000623185 PABPN1Q86U42 306 aaKnown RBP eCLIP23.61■■□□□ 1.37
LINC00963-216ENST00000623185 UNC13AQ9UPW8 1703 aa23.59■■□□□ 1.37
LINC00963-216ENST00000623185 BICRAQ9NZM4 1560 aa23.52■■□□□ 1.36
LINC00963-216ENST00000623185 SHROOM4Q9ULL8 1493 aa23.45■■□□□ 1.34
LINC00963-216ENST00000623185 CECR2Q9BXF3 1484 aa22.91■■□□□ 1.26
LINC00963-216ENST00000623185 EIF4G1Q04637 1599 aaKnown RBP22.88■■□□□ 1.25
LINC00963-216ENST00000623185 DNAJC5BQ9UF47 199 aa22.84■■□□□ 1.25
LINC00963-216ENST00000623185 BAZ1AQ9NRL2 1556 aaPredicted RBP22.78■■□□□ 1.24
LINC00963-216ENST00000623185 SMARCA4P51532 1647 aa22.7■■□□□ 1.22
LINC00963-216ENST00000623185 CC2D2AQ9P2K1 1620 aa22.68■■□□□ 1.22
LINC00963-216ENST00000623185 MROH2BQ7Z745 1585 aa22.67■■□□□ 1.22
LINC00963-216ENST00000623185 RSF1Q96T23 1441 aaPredicted RBP22.62■■□□□ 1.21
LINC00963-216ENST00000623185 ATAD2BQ9ULI0 1458 aa22.59■■□□□ 1.21
LINC00963-216ENST00000623185 NCAPD3P42695 1498 aa22.57■■□□□ 1.2
LINC00963-216ENST00000623185 SMARCA2P51531 1590 aa22.54■■□□□ 1.2
LINC00963-216ENST00000623185 PEG3Q9GZU2 1588 aa22.53■■□□□ 1.2
LINC00963-216ENST00000623185 WIZO95785 1651 aa22.39■■□□□ 1.17
LINC00963-216ENST00000623185 HMGXB3Q12766 1538 aa22.38■■□□□ 1.17
LINC00963-216ENST00000623185 BAZ1BQ9UIG0 1483 aaKnown RBP22.38■■□□□ 1.17
LINC00963-216ENST00000623185 SUPT5HO00267 1087 aaKnown RBP22.35■■□□□ 1.17
LINC00963-216ENST00000623185 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
LINC00963-216ENST00000623185 CCDC88BA6NC98 1476 aa22.03■■□□□ 1.12
LINC00963-216ENST00000623185 CADPSQ9ULU8 1353 aa21.95■■□□□ 1.1
LINC00963-216ENST00000623185 CFTRP13569 1480 aa21.84■■□□□ 1.09
LINC00963-216ENST00000623185 LAMC3Q9Y6N6 1575 aa21.82■■□□□ 1.08
LINC00963-216ENST00000623185 NESP48681 1621 aa21.81■■□□□ 1.08
LINC00963-216ENST00000623185 PDS5BQ9NTI5 1447 aa21.75■■□□□ 1.07
LINC00963-216ENST00000623185 ERCC6Q03468 1493 aa21.61■■□□□ 1.05
LINC00963-216ENST00000623185 FANCD2Q9BXW9 1451 aa21.61■■□□□ 1.05
LINC00963-216ENST00000623185 CEP164Q9UPV0 1460 aa21.52■■□□□ 1.04
LINC00963-216ENST00000623185 PRDM2Q13029 1718 aa21.47■■□□□ 1.03
LINC00963-216ENST00000623185 KIF21AQ7Z4S6 1674 aa21.44■■□□□ 1.02
LINC00963-216ENST00000623185 MRC2Q9UBG0 1479 aa21.43■■□□□ 1.02
LINC00963-216ENST00000623185 ABCC8Q09428 1581 aa21.4■■□□□ 1.02
LINC00963-216ENST00000623185 URB2Q14146 1524 aaKnown RBP21.34■■□□□ 1.01
LINC00963-216ENST00000623185 THOC2Q8NI27 1593 aaKnown RBP21.32■■□□□ 1
LINC00963-216ENST00000623185 WDR62O43379 1518 aa21.31■■□□□ 1
LINC00963-216ENST00000623185 WRNQ14191 1432 aaPredicted RBP eCLIP21.3■■□□□ 1
LINC00963-216ENST00000623185 TOPBP1Q92547 1522 aa21.29■■□□□ 1
LINC00963-216ENST00000623185 CUX2O14529 1486 aa21.28■■□□□ 1
LINC00963-216ENST00000623185 DNMBPQ6XZF7 1577 aa21.26■□□□□ 0.99
LINC00963-216ENST00000623185 CUX1P39880 1505 aa21.24■□□□□ 0.99
LINC00963-216ENST00000623185 TOP2BQ02880 1626 aa21.15■□□□□ 0.98
LINC00963-216ENST00000623185 TRIM41Q8WV44 630 aa21.14■□□□□ 0.97
LINC00963-216ENST00000623185 SOGA1O94964 1423 aa21.13■□□□□ 0.97
LINC00963-216ENST00000623185 POLA1P09884 1462 aaPredicted RBP21.13■□□□□ 0.97
LINC00963-216ENST00000623185 FGD5Q6ZNL6 1462 aa21.12■□□□□ 0.97
LINC00963-216ENST00000623185 SYNJ1O43426 1573 aa21.11■□□□□ 0.97
LINC00963-216ENST00000623185 CHIC1Q5VXU3 224 aa21.11■□□□□ 0.97
LINC00963-216ENST00000623185 IFT140Q96RY7 1462 aa21.1■□□□□ 0.97
LINC00963-216ENST00000623185 BIVM-ERCC5R4GMW8 1640 aa21.09■□□□□ 0.97
LINC00963-216ENST00000623185 RAD54L2Q9Y4B4 1467 aa21.05■□□□□ 0.96
LINC00963-216ENST00000623185 TARBP1Q13395 1621 aaKnown RBP20.98■□□□□ 0.95
LINC00963-216ENST00000623185 ABCA10Q8WWZ4 1543 aa20.97■□□□□ 0.95
LINC00963-216ENST00000623185 TDRD9Q8NDG6 1382 aaKnown RBP20.96■□□□□ 0.95
LINC00963-216ENST00000623185 ZNF608Q9ULD9 1512 aaPredicted RBP20.94■□□□□ 0.94
LINC00963-216ENST00000623185 AQRO60306 1485 aaKnown RBP eCLIP20.91■□□□□ 0.94
LINC00963-216ENST00000623185 WDR97A6NE52 1622 aa20.86■□□□□ 0.93
LINC00963-216ENST00000623185 GAPVD1Q14C86 1478 aa20.85■□□□□ 0.93
LINC00963-216ENST00000623185 KIF27Q86VH2 1401 aa20.85■□□□□ 0.93
LINC00963-216ENST00000623185 GRIN2BQ13224 1484 aa20.8■□□□□ 0.92
LINC00963-216ENST00000623185 IGF1RP08069 1367 aa20.78■□□□□ 0.92
LINC00963-216ENST00000623185 EIF4G3O43432 1585 aaKnown RBP20.77■□□□□ 0.92
LINC00963-216ENST00000623185 ABCA5Q8WWZ7 1642 aa20.75■□□□□ 0.91
LINC00963-216ENST00000623185 ERICH3Q5RHP9 1530 aa20.72■□□□□ 0.91
LINC00963-216ENST00000623185 RUSC2Q8N2Y8 1516 aa20.72■□□□□ 0.91
LINC00963-216ENST00000623185 CSRNP3Q8WYN3 585 aa20.71■□□□□ 0.91
LINC00963-216ENST00000623185 EEA1Q15075 1411 aa20.7■□□□□ 0.9
LINC00963-216ENST00000623185 MAGI1Q96QZ7 1491 aaPredicted RBP20.69■□□□□ 0.9
LINC00963-216ENST00000623185 CHMP7Q8WUX9 453 aaPredicted RBP20.68■□□□□ 0.9
LINC00963-216ENST00000623185 SNAPC4Q5SXM2 1469 aa20.66■□□□□ 0.9
LINC00963-216ENST00000623185 FHAD1B1AJZ9 1412 aa20.65■□□□□ 0.9
LINC00963-216ENST00000623185 CARMIL1Q5VZK9 1371 aa20.64■□□□□ 0.89
LINC00963-216ENST00000623185 FBLN2P98095 1184 aa20.64■□□□□ 0.89
LINC00963-216ENST00000623185 FAM9AQ8IZU1 332 aaPredicted RBP20.62■□□□□ 0.89
LINC00963-216ENST00000623185 SYNJ2O15056 1496 aa20.62■□□□□ 0.89
LINC00963-216ENST00000623185 OSCARQ8IYS5 282 aa20.61■□□□□ 0.89
LINC00963-216ENST00000623185 PBRM1Q86U86 1689 aa20.6■□□□□ 0.89
LINC00963-216ENST00000623185 PRXQ9BXM0 1461 aa20.53■□□□□ 0.88
LINC00963-216ENST00000623185 CUL7Q14999 1698 aa20.52■□□□□ 0.88
LINC00963-216ENST00000623185 ADAMTS12P58397 1594 aa20.51■□□□□ 0.87
LINC00963-216ENST00000623185 RAPGEF2Q9Y4G8 1499 aa20.51■□□□□ 0.87
LINC00963-216ENST00000623185 GRIN2AQ12879 1464 aa20.5■□□□□ 0.87
LINC00963-216ENST00000623185 NUP160Q12769 1436 aa20.43■□□□□ 0.86
LINC00963-216ENST00000623185 CHD1O14646 1710 aa20.4■□□□□ 0.86
LINC00963-216ENST00000623185 JPH4Q96JJ6 628 aa20.35■□□□□ 0.85
LINC00963-216ENST00000623185 DNAJC5Q9H3Z4 198 aa20.35■□□□□ 0.85
LINC00963-216ENST00000623185 KIAA0586Q9BVV6 1533 aa20.35■□□□□ 0.85
LINC00963-216ENST00000623185 KIF21BO75037 1637 aa20.34■□□□□ 0.85
LINC00963-216ENST00000623185 UBTFP17480 764 aaKnown RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms