Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.014e-6■■□□□ 14.3
CSTF2TQ9H0L4 EFNA1-203ENST00000469878 1288 ntTSL 312.75□□□□□ -0.373e-14■■□□□ 14.3
CSTF2TQ9H0L4 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC12.6□□□□□ -0.397e-9■■□□□ 14.3
CSTF2TQ9H0L4 EFNA1-201ENST00000368406 1444 ntTSL 1 (best) BASIC11.68□□□□□ -0.543e-14■■□□□ 14.3
CSTF2TQ9H0L4 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.561e-7■■□□□ 14.3
CSTF2TQ9H0L4 PPP6R1-208ENST00000592242 574 ntTSL 411.07□□□□□ -0.644e-6■■□□□ 14.3
CSTF2TQ9H0L4 DSP-201ENST00000379802 9796 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.791e-7■■□□□ 14.3
CSTF2TQ9H0L4 LPP-206ENST00000430340 521 ntTSL 39.88□□□□□ -0.831e-7■■□□□ 14.3
CSTF2TQ9H0L4 PRKAR1A-201ENST00000358598 3576 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.832e-6■■□□□ 14.3
CSTF2TQ9H0L4 AC007780.1-201ENST00000590353 719 ntTSL 48.4□□□□□ -1.062e-6■■□□□ 14.3
CSTF2TQ9H0L4 LPP-209ENST00000454789 343 ntTSL 58.34□□□□□ -1.071e-7■■□□□ 14.3
CSTF2TQ9H0L4 LPP-201ENST00000414139 502 ntTSL 46.57□□□□□ -1.361e-7■■□□□ 14.3
CSTF2TQ9H0L4 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.43□□□□□ -0.262e-6■■□□□ 14.3
CSTF2TQ9H0L4 TET3-202ENST00000409262 11388 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.952e-6■■□□□ 14.3
CSTF2TQ9H0L4 CERS2-206ENST00000421609 738 ntTSL 324.13■■□□□ 1.452e-7■■□□□ 14.3
CSTF2TQ9H0L4 CERS2-207ENST00000457392 545 ntTSL 321.08■□□□□ 0.972e-7■■□□□ 14.3
CSTF2TQ9H0L4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.243e-7■■□□□ 14.3
CSTF2TQ9H0L4 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.13□□□□□ -0.153e-7■■□□□ 14.3
CSTF2TQ9H0L4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.1□□□□□ -0.153e-7■■□□□ 14.3
CSTF2TQ9H0L4 CYB5R3-207ENST00000466276 581 ntTSL 412.6□□□□□ -0.393e-7■■□□□ 14.3
CSTF2TQ9H0L4 CYB5R3-206ENST00000438270 675 ntTSL 311.12□□□□□ -0.633e-7■■□□□ 14.3
CSTF2TQ9H0L4 CUX1-210ENST00000497815 947 ntTSL 210.98□□□□□ -0.659e-7■■□□□ 14.3
CSTF2TQ9H0L4 CUX1-204ENST00000393824 2331 ntTSL 2 BASIC10.67□□□□□ -0.79e-7■■□□□ 14.3
CSTF2TQ9H0L4 CUX1-202ENST00000292538 2930 ntTSL 1 (best) BASIC10.14□□□□□ -0.799e-7■■□□□ 14.3
CSTF2TQ9H0L4 CUX1-212ENST00000547394 2878 ntTSL 2 BASIC9.81□□□□□ -0.849e-7■■□□□ 14.3
CSTF2TQ9H0L4 CUX1-205ENST00000425244 2776 ntTSL 2 BASIC9.68□□□□□ -0.869e-7■■□□□ 14.3
CSTF2TQ9H0L4 CUX1-221ENST00000622516 2990 ntTSL 1 (best) BASIC9.48□□□□□ -0.899e-7■■□□□ 14.3
CSTF2TQ9H0L4 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.99e-7■■□□□ 14.3
CSTF2TQ9H0L4 CUX1-206ENST00000437600 3031 ntTSL 1 (best) BASIC8.48□□□□□ -1.059e-7■■□□□ 14.3
CSTF2TQ9H0L4 CUX1-220ENST00000607092 559 ntTSL 36.03□□□□□ -1.448e-7■■□□□ 14.3
CSTF2TQ9H0L4 ARHGEF1-223ENST00000617585 737 ntTSL 220.98■□□□□ 0.951e-6■■□□□ 14.3
CSTF2TQ9H0L4 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.49□□□□□ -0.252e-7■■□□□ 14.3
CSTF2TQ9H0L4 CTDNEP1-209ENST00000574205 1506 ntTSL 530.64■■■□□ 2.51e-37■■□□□ 14.3
CSTF2TQ9H0L4 CTDNEP1-206ENST00000571409 741 ntTSL 528.55■■■□□ 2.165e-26■■□□□ 14.3
CSTF2TQ9H0L4 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.745e-26■■□□□ 14.3
CSTF2TQ9H0L4 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.621e-37■■□□□ 14.3
CSTF2TQ9H0L4 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.65e-26■■□□□ 14.3
CSTF2TQ9H0L4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.73■□□□□ 0.275e-26■■□□□ 14.3
CSTF2TQ9H0L4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.265e-26■■□□□ 14.3
CSTF2TQ9H0L4 CTDNEP1-211ENST00000575783 876 ntTSL 515.64■□□□□ 0.095e-26■■□□□ 14.3
CSTF2TQ9H0L4 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.331e-6■■□□□ 14.3
CSTF2TQ9H0L4 BCAR1-217ENST00000566465 547 ntTSL 414.44□□□□□ -0.12e-8■■□□□ 14.3
CSTF2TQ9H0L4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.065e-10■■□□□ 14.3
CSTF2TQ9H0L4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.513e-6■■□□□ 14.3
CSTF2TQ9H0L4 ROR2-201ENST00000375708 4096 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.622e-6■■□□□ 14.3
CSTF2TQ9H0L4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.792e-8■■□□□ 14.3
CSTF2TQ9H0L4 UBE2D3-216ENST00000503742 1977 ntTSL 1 (best)19.06■□□□□ 0.642e-8■■□□□ 14.3
CSTF2TQ9H0L4 UBE2D3-220ENST00000505307 743 ntTSL 518.89■□□□□ 0.612e-8■■□□□ 14.3
CSTF2TQ9H0L4 UBE2D3-215ENST00000503418 662 ntTSL 418.36■□□□□ 0.532e-8■■□□□ 14.3
CSTF2TQ9H0L4 UBE2D3-213ENST00000502690 599 ntTSL 416.09■□□□□ 0.172e-8■■□□□ 14.3
CSTF2TQ9H0L4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.177e-8■■□□□ 14.3
CSTF2TQ9H0L4 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.337e-8■■□□□ 14.3
CSTF2TQ9H0L4 UBE2D3-209ENST00000394804 4166 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.677e-8■■□□□ 14.3
CSTF2TQ9H0L4 UBE2D3-232ENST00000514755 593 ntTSL 410.26□□□□□ -0.772e-8■■□□□ 14.3
CSTF2TQ9H0L4 UBE2D3-206ENST00000357194 660 ntTSL 2 BASIC9.74□□□□□ -0.852e-8■■□□□ 14.3
CSTF2TQ9H0L4 UBE2D3-202ENST00000338145 896 ntAPPRIS ALT1 TSL 5 BASIC9.66□□□□□ -0.862e-8■■□□□ 14.3
CSTF2TQ9H0L4 UBE2D3-227ENST00000508818 584 ntTSL 29.57□□□□□ -0.882e-8■■□□□ 14.3
CSTF2TQ9H0L4 UBE2D3-208ENST00000394803 2227 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.97e-8■■□□□ 14.3
CSTF2TQ9H0L4 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC9.18□□□□□ -0.942e-8■■□□□ 14.3
CSTF2TQ9H0L4 UBE2D3-223ENST00000508249 604 ntTSL 48.6□□□□□ -1.032e-8■■□□□ 14.3
CSTF2TQ9H0L4 UBE2D3-222ENST00000508238 547 ntTSL 47.46□□□□□ -1.222e-8■■□□□ 14.3
CSTF2TQ9H0L4 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.433e-6■■□□□ 14.3
CSTF2TQ9H0L4 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.79□□□□□ -0.25e-9■■□□□ 14.3
CSTF2TQ9H0L4 C11orf24-207ENST00000532534 687 ntTSL 319.39■□□□□ 0.692e-7■■□□□ 14.3
CSTF2TQ9H0L4 C11orf24-204ENST00000529590 610 ntTSL 315.62■□□□□ 0.092e-7■■□□□ 14.3
CSTF2TQ9H0L4 C11orf24-203ENST00000529339 603 ntTSL 215.01□□□□□ -0.012e-7■■□□□ 14.3
CSTF2TQ9H0L4 C11orf24-208ENST00000532969 485 ntTSL 213.58□□□□□ -0.242e-7■■□□□ 14.3
CSTF2TQ9H0L4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.75■■□□□ 1.076e-7■■□□□ 14.2
CSTF2TQ9H0L4 RHPN2-204ENST00000588388 2378 ntTSL 211.57□□□□□ -0.568e-7■■□□□ 14.2
CSTF2TQ9H0L4 RHPN2-201ENST00000254260 3500 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.038e-7■■□□□ 14.2
CSTF2TQ9H0L4 MTA1-209ENST00000469140 1666 ntTSL 521.33■■□□□ 12e-7■■□□□ 14.2
CSTF2TQ9H0L4 MTA1-220ENST00000552286 1943 ntTSL 217.55■□□□□ 0.42e-7■■□□□ 14.2
CSTF2TQ9H0L4 MTA1-206ENST00000434050 2050 ntTSL 1 (best)16.44■□□□□ 0.222e-7■■□□□ 14.2
CSTF2TQ9H0L4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.922e-7■■□□□ 14.2
CSTF2TQ9H0L4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.98■□□□□ 0.472e-7■■□□□ 14.2
CSTF2TQ9H0L4 GIPR-203ENST00000585889 1414 ntTSL 1 (best)17.53■□□□□ 0.42e-7■■□□□ 14.2
CSTF2TQ9H0L4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.22e-7■■□□□ 14.2
CSTF2TQ9H0L4 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.292e-7■■□□□ 14.2
CSTF2TQ9H0L4 MYRF-206ENST00000537766 1392 ntTSL 323.06■■□□□ 1.288e-7■■□□□ 14.2
CSTF2TQ9H0L4 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.418e-7■■□□□ 14.2
CSTF2TQ9H0L4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.351e-6■■□□□ 14.2
CSTF2TQ9H0L4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.79■□□□□ 0.281e-6■■□□□ 14.2
CSTF2TQ9H0L4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.74■□□□□ 0.111e-6■■□□□ 14.2
CSTF2TQ9H0L4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.081e-6■■□□□ 14.2
CSTF2TQ9H0L4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.071e-6■■□□□ 14.2
CSTF2TQ9H0L4 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.121e-6■■□□□ 14.2
CSTF2TQ9H0L4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.141e-6■■□□□ 14.2
CSTF2TQ9H0L4 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.291e-6■■□□□ 14.2
CSTF2TQ9H0L4 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.431e-6■■□□□ 14.2
CSTF2TQ9H0L4 HDAC4-210ENST00000493582 3188 ntTSL 1 (best)11.36□□□□□ -0.591e-6■■□□□ 14.2
CSTF2TQ9H0L4 AGRN-202ENST00000419249 861 ntTSL 317.03■□□□□ 0.329e-7■■□□□ 14.2
CSTF2TQ9H0L4 AGRN-203ENST00000461111 3385 ntTSL 1 (best)12.03□□□□□ -0.489e-7■■□□□ 14.2
CSTF2TQ9H0L4 AGFG2-203ENST00000430857 915 ntTSL 524.41■■□□□ 1.53e-11■■□□□ 14.2
CSTF2TQ9H0L4 AGFG2-205ENST00000477022 1327 ntTSL 1 (best)18.57■□□□□ 0.563e-11■■□□□ 14.2
CSTF2TQ9H0L4 EGFL7-207ENST00000492862 723 ntTSL 517.09■□□□□ 0.335e-7■■□□□ 14.2
CSTF2TQ9H0L4 EGFL7-205ENST00000490469 456 ntTSL 515.97■□□□□ 0.155e-7■■□□□ 14.2
CSTF2TQ9H0L4 PRR7-AS1-202ENST00000506465 421 ntTSL 35.92□□□□□ -1.464e-8■■□□□ 14.2
CSTF2TQ9H0L4 ACTN1-220ENST00000556433 1259 ntTSL 321.39■■□□□ 1.011e-6■■□□□ 14.2
CSTF2TQ9H0L4 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.8□□□□□ -0.361e-6■■□□□ 14.2
CSTF2TQ9H0L4 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.47□□□□□ -0.411e-6■■□□□ 14.2
Retrieved 100 of 19,151 protein–RNA pairs in 142.1 ms