RNA–Protein interactions for RNA: ENST00000469878.5

EFNA1-203, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,288 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-203ENST00000469878 NISCHQ9Y2I1 1504 aa33.84■■■■□ 3.01
EFNA1-203ENST00000469878 CCDC180Q9P1Z9 1646 aa30.31■■■□□ 2.44
EFNA1-203ENST00000469878 ABCC9O60706 1549 aa30.19■■■□□ 2.42
EFNA1-203ENST00000469878 RB1CC1Q8TDY2 1594 aa28.74■■■□□ 2.19
EFNA1-203ENST00000469878 NACADO15069 1562 aa28.56■■■□□ 2.16
EFNA1-203ENST00000469878 DCAF8L2P0C7V8 631 aa28.45■■■□□ 2.14
EFNA1-203ENST00000469878 UNC13AQ9UPW8 1703 aa28.23■■■□□ 2.11
EFNA1-203ENST00000469878 DNAJC5BQ9UF47 199 aa28.19■■■□□ 2.1
EFNA1-203ENST00000469878 MYO15BQ96JP2 1530 aa28.18■■■□□ 2.1
EFNA1-203ENST00000469878 PABPN1Q86U42 306 aaKnown RBP eCLIP28.12■■■□□ 2.09
EFNA1-203ENST00000469878 ZCCHC6Q5VYS8 1495 aaKnown RBP28.11■■■□□ 2.09
EFNA1-203ENST00000469878 BICRAQ9NZM4 1560 aa27.99■■■□□ 2.07
EFNA1-203ENST00000469878 DCAF1Q9Y4B6 1507 aa27.91■■■□□ 2.06
EFNA1-203ENST00000469878 SCRIBQ14160 1630 aa27.7■■■□□ 2.03
EFNA1-203ENST00000469878 SHROOM4Q9ULL8 1493 aa27.47■■□□□ 1.99
EFNA1-203ENST00000469878 CC2D2AQ9P2K1 1620 aa27.28■■□□□ 1.96
EFNA1-203ENST00000469878 EIF4G1Q04637 1599 aaKnown RBP27.26■■□□□ 1.95
EFNA1-203ENST00000469878 CECR2Q9BXF3 1484 aa27.14■■□□□ 1.94
EFNA1-203ENST00000469878 SMARCA4P51532 1647 aa26.41■■□□□ 1.82
EFNA1-203ENST00000469878 NCAPD3P42695 1498 aa26.36■■□□□ 1.81
EFNA1-203ENST00000469878 ATAD2BQ9ULI0 1458 aa26.35■■□□□ 1.81
EFNA1-203ENST00000469878 SMARCA2P51531 1590 aa26.24■■□□□ 1.79
EFNA1-203ENST00000469878 BAZ1AQ9NRL2 1556 aaPredicted RBP26.24■■□□□ 1.79
EFNA1-203ENST00000469878 HMGXB3Q12766 1538 aa26.22■■□□□ 1.79
EFNA1-203ENST00000469878 MROH2BQ7Z745 1585 aa26.13■■□□□ 1.77
EFNA1-203ENST00000469878 PEG3Q9GZU2 1588 aa26.11■■□□□ 1.77
EFNA1-203ENST00000469878 BAZ1BQ9UIG0 1483 aaKnown RBP26.1■■□□□ 1.77
EFNA1-203ENST00000469878 NESP48681 1621 aa26.02■■□□□ 1.76
EFNA1-203ENST00000469878 ERCC6Q03468 1493 aa25.99■■□□□ 1.75
EFNA1-203ENST00000469878 CUX2O14529 1486 aa25.86■■□□□ 1.73
EFNA1-203ENST00000469878 WIZO95785 1651 aa25.86■■□□□ 1.73
EFNA1-203ENST00000469878 LAMC3Q9Y6N6 1575 aa25.76■■□□□ 1.71
EFNA1-203ENST00000469878 THOC2Q8NI27 1593 aaKnown RBP25.72■■□□□ 1.71
EFNA1-203ENST00000469878 KIF21AQ7Z4S6 1674 aa25.71■■□□□ 1.71
EFNA1-203ENST00000469878 DNAJC5Q9H3Z4 198 aa25.65■■□□□ 1.7
EFNA1-203ENST00000469878 RSF1Q96T23 1441 aaPredicted RBP25.61■■□□□ 1.69
EFNA1-203ENST00000469878 CADPSQ9ULU8 1353 aa25.56■■□□□ 1.68
EFNA1-203ENST00000469878 PDS5BQ9NTI5 1447 aa25.55■■□□□ 1.68
EFNA1-203ENST00000469878 TOP2AP11388 1531 aaKnown RBP25.48■■□□□ 1.67
EFNA1-203ENST00000469878 MRC2Q9UBG0 1479 aa25.4■■□□□ 1.66
EFNA1-203ENST00000469878 WDR62O43379 1518 aa25.36■■□□□ 1.65
EFNA1-203ENST00000469878 CFTRP13569 1480 aa25.34■■□□□ 1.65
EFNA1-203ENST00000469878 FANCD2Q9BXW9 1451 aa25.32■■□□□ 1.64
EFNA1-203ENST00000469878 CEP164Q9UPV0 1460 aa25.32■■□□□ 1.64
EFNA1-203ENST00000469878 CCDC88BA6NC98 1476 aa25.18■■□□□ 1.62
EFNA1-203ENST00000469878 PRDM2Q13029 1718 aa25.17■■□□□ 1.62
EFNA1-203ENST00000469878 URB2Q14146 1524 aaKnown RBP25.15■■□□□ 1.62
EFNA1-203ENST00000469878 TOPBP1Q92547 1522 aa24.87■■□□□ 1.57
EFNA1-203ENST00000469878 ZNF608Q9ULD9 1512 aaPredicted RBP24.83■■□□□ 1.57
EFNA1-203ENST00000469878 DNMBPQ6XZF7 1577 aa24.8■■□□□ 1.56
EFNA1-203ENST00000469878 IFT140Q96RY7 1462 aa24.78■■□□□ 1.56
EFNA1-203ENST00000469878 EIF4G3O43432 1585 aaKnown RBP24.71■■□□□ 1.55
EFNA1-203ENST00000469878 ABCC8Q09428 1581 aa24.71■■□□□ 1.55
EFNA1-203ENST00000469878 TARBP1Q13395 1621 aaKnown RBP24.67■■□□□ 1.54
EFNA1-203ENST00000469878 OSCARQ8IYS5 282 aa24.66■■□□□ 1.54
EFNA1-203ENST00000469878 TRIM41Q8WV44 630 aa24.65■■□□□ 1.54
EFNA1-203ENST00000469878 POLA1P09884 1462 aaPredicted RBP24.64■■□□□ 1.53
EFNA1-203ENST00000469878 AQRO60306 1485 aaKnown RBP eCLIP24.58■■□□□ 1.531e-11■■■■■ 43.1
EFNA1-203ENST00000469878 SUPT5HO00267 1087 aaKnown RBP24.58■■□□□ 1.53
EFNA1-203ENST00000469878 RAD54L2Q9Y4B4 1467 aa24.58■■□□□ 1.52
EFNA1-203ENST00000469878 CUX1P39880 1505 aa24.55■■□□□ 1.52
EFNA1-203ENST00000469878 CHD1O14646 1710 aa24.52■■□□□ 1.52
EFNA1-203ENST00000469878 FGD5Q6ZNL6 1462 aa24.51■■□□□ 1.51
EFNA1-203ENST00000469878 RIMBP3CA6NJZ7 1639 aa24.47■■□□□ 1.51
EFNA1-203ENST00000469878 RIMBP3BA6NNM3 1639 aa24.47■■□□□ 1.51
EFNA1-203ENST00000469878 RIMBP3Q9UFD9 1639 aa24.47■■□□□ 1.51
EFNA1-203ENST00000469878 SOGA1O94964 1423 aa24.47■■□□□ 1.51
EFNA1-203ENST00000469878 TDRD9Q8NDG6 1382 aaKnown RBP24.44■■□□□ 1.5
EFNA1-203ENST00000469878 WDR97A6NE52 1622 aa24.39■■□□□ 1.5
EFNA1-203ENST00000469878 ARHGEF11O15085 1522 aa24.39■■□□□ 1.49
EFNA1-203ENST00000469878 SNAPC4Q5SXM2 1469 aa24.35■■□□□ 1.49
EFNA1-203ENST00000469878 FBLN2P98095 1184 aa24.33■■□□□ 1.49
EFNA1-203ENST00000469878 PBRM1Q86U86 1689 aa24.27■■□□□ 1.48
EFNA1-203ENST00000469878 GRIN2BQ13224 1484 aa24.25■■□□□ 1.47
EFNA1-203ENST00000469878 MAGI1Q96QZ7 1491 aaPredicted RBP24.23■■□□□ 1.47
EFNA1-203ENST00000469878 ABCA5Q8WWZ7 1642 aa24.21■■□□□ 1.47
EFNA1-203ENST00000469878 ABCA10Q8WWZ4 1543 aa24.2■■□□□ 1.47
EFNA1-203ENST00000469878 SYNJ1O43426 1573 aa24.2■■□□□ 1.46
EFNA1-203ENST00000469878 GAPVD1Q14C86 1478 aa24.19■■□□□ 1.46
EFNA1-203ENST00000469878 CLASP1Q7Z460 1538 aa24.19■■□□□ 1.46
EFNA1-203ENST00000469878 BIVM-ERCC5R4GMW8 1640 aa24.18■■□□□ 1.46
EFNA1-203ENST00000469878 ARAP1Q96P48 1450 aa24.18■■□□□ 1.46
EFNA1-203ENST00000469878 TOP2BQ02880 1626 aa24.17■■□□□ 1.46
EFNA1-203ENST00000469878 SYNJ2O15056 1496 aa24.16■■□□□ 1.46
EFNA1-203ENST00000469878 CHMP7Q8WUX9 453 aaPredicted RBP24.14■■□□□ 1.45
EFNA1-203ENST00000469878 WRNQ14191 1432 aaPredicted RBP eCLIP24.13■■□□□ 1.45
EFNA1-203ENST00000469878 CYB5RLQ6IPT4 315 aa24.13■■□□□ 1.45
EFNA1-203ENST00000469878 ADAMTS12P58397 1594 aa24.03■■□□□ 1.44
EFNA1-203ENST00000469878 GRIN2AQ12879 1464 aa23.97■■□□□ 1.43
EFNA1-203ENST00000469878 CEP170Q5SW79 1584 aa23.94■■□□□ 1.42
EFNA1-203ENST00000469878 ERCC6L2Q5T890 1561 aa23.9■■□□□ 1.42
EFNA1-203ENST00000469878 ERICH3Q5RHP9 1530 aa23.89■■□□□ 1.41
EFNA1-203ENST00000469878 FHAD1B1AJZ9 1412 aa23.87■■□□□ 1.41
EFNA1-203ENST00000469878 NUP160Q12769 1436 aa23.87■■□□□ 1.41
EFNA1-203ENST00000469878 SHROOM2Q13796 1616 aa23.8■■□□□ 1.4
EFNA1-203ENST00000469878 TRHP20396 242 aaPredicted RBP23.79■■□□□ 1.4
EFNA1-203ENST00000469878 RUSC2Q8N2Y8 1516 aa23.69■■□□□ 1.38
EFNA1-203ENST00000469878 KIF27Q86VH2 1401 aa23.62■■□□□ 1.37
EFNA1-203ENST00000469878 PRG4Q92954 1404 aaPredicted RBP23.62■■□□□ 1.37
EFNA1-203ENST00000469878 IGF1RP08069 1367 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms