RNA–Protein interactions for RNA: ENST00000592242.1

PPP6R1-208, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

TSL 4

Gene PPP6R1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-208ENST00000592242 NISCHQ9Y2I1 1504 aa29.94■■■□□ 2.38
PPP6R1-208ENST00000592242 ABCC9O60706 1549 aa27.9■■■□□ 2.06
PPP6R1-208ENST00000592242 CCDC180Q9P1Z9 1646 aa27.08■■□□□ 1.93
PPP6R1-208ENST00000592242 DNAJC5BQ9UF47 199 aa26.98■■□□□ 1.91
PPP6R1-208ENST00000592242 RB1CC1Q8TDY2 1594 aa26.2■■□□□ 1.79
PPP6R1-208ENST00000592242 PABPN1Q86U42 306 aaKnown RBP eCLIP25.92■■□□□ 1.74
PPP6R1-208ENST00000592242 NACADO15069 1562 aa25.87■■□□□ 1.73
PPP6R1-208ENST00000592242 DCAF8L2P0C7V8 631 aa25.59■■□□□ 1.69
PPP6R1-208ENST00000592242 BICRAQ9NZM4 1560 aa25.5■■□□□ 1.67
PPP6R1-208ENST00000592242 UNC13AQ9UPW8 1703 aa25.47■■□□□ 1.67
PPP6R1-208ENST00000592242 DNAJC5Q9H3Z4 198 aa25.34■■□□□ 1.65
PPP6R1-208ENST00000592242 MYO15BQ96JP2 1530 aa25.32■■□□□ 1.64
PPP6R1-208ENST00000592242 CECR2Q9BXF3 1484 aa25.24■■□□□ 1.63
PPP6R1-208ENST00000592242 CC2D2AQ9P2K1 1620 aa25.13■■□□□ 1.61
PPP6R1-208ENST00000592242 SHROOM4Q9ULL8 1493 aa25.11■■□□□ 1.61
PPP6R1-208ENST00000592242 EIF4G1Q04637 1599 aaKnown RBP24.92■■□□□ 1.58
PPP6R1-208ENST00000592242 DCAF1Q9Y4B6 1507 aa24.71■■□□□ 1.55
PPP6R1-208ENST00000592242 ZCCHC6Q5VYS8 1495 aaKnown RBP24.64■■□□□ 1.53
PPP6R1-208ENST00000592242 SCRIBQ14160 1630 aa24.62■■□□□ 1.53
PPP6R1-208ENST00000592242 CUX2O14529 1486 aa24.39■■□□□ 1.5
PPP6R1-208ENST00000592242 ERCC6Q03468 1493 aa24.13■■□□□ 1.45
PPP6R1-208ENST00000592242 NCAPD3P42695 1498 aa23.97■■□□□ 1.43
PPP6R1-208ENST00000592242 TRIM41Q8WV44 630 aa23.81■■□□□ 1.4
PPP6R1-208ENST00000592242 NESP48681 1621 aa23.76■■□□□ 1.39
PPP6R1-208ENST00000592242 ATAD2BQ9ULI0 1458 aa23.75■■□□□ 1.39
PPP6R1-208ENST00000592242 HMGXB3Q12766 1538 aa23.64■■□□□ 1.37
PPP6R1-208ENST00000592242 THOC2Q8NI27 1593 aaKnown RBP23.61■■□□□ 1.37
PPP6R1-208ENST00000592242 SMARCA2P51531 1590 aa23.59■■□□□ 1.37
PPP6R1-208ENST00000592242 LAMC3Q9Y6N6 1575 aa23.45■■□□□ 1.34
PPP6R1-208ENST00000592242 SMARCA4P51532 1647 aa23.44■■□□□ 1.34
PPP6R1-208ENST00000592242 BAZ1BQ9UIG0 1483 aaKnown RBP23.43■■□□□ 1.34
PPP6R1-208ENST00000592242 PDS5BQ9NTI5 1447 aa23.41■■□□□ 1.34
PPP6R1-208ENST00000592242 KIF21AQ7Z4S6 1674 aa23.3■■□□□ 1.32
PPP6R1-208ENST00000592242 PEG3Q9GZU2 1588 aa23.28■■□□□ 1.32
PPP6R1-208ENST00000592242 BAZ1AQ9NRL2 1556 aaPredicted RBP23.26■■□□□ 1.31
PPP6R1-208ENST00000592242 OSCARQ8IYS5 282 aa23.21■■□□□ 1.31
PPP6R1-208ENST00000592242 MRC2Q9UBG0 1479 aa23.21■■□□□ 1.31
PPP6R1-208ENST00000592242 CADPSQ9ULU8 1353 aa23.2■■□□□ 1.3
PPP6R1-208ENST00000592242 WDR62O43379 1518 aa23.17■■□□□ 1.3
PPP6R1-208ENST00000592242 MROH2BQ7Z745 1585 aa23.05■■□□□ 1.28
PPP6R1-208ENST00000592242 CEP164Q9UPV0 1460 aa22.95■■□□□ 1.26
PPP6R1-208ENST00000592242 FANCD2Q9BXW9 1451 aa22.88■■□□□ 1.25
PPP6R1-208ENST00000592242 RIMBP3CA6NJZ7 1639 aa22.86■■□□□ 1.25
PPP6R1-208ENST00000592242 RIMBP3BA6NNM3 1639 aa22.86■■□□□ 1.25
PPP6R1-208ENST00000592242 RIMBP3Q9UFD9 1639 aa22.86■■□□□ 1.25
PPP6R1-208ENST00000592242 ARHGEF11O15085 1522 aa22.76■■□□□ 1.23
PPP6R1-208ENST00000592242 CFTRP13569 1480 aa22.75■■□□□ 1.23
PPP6R1-208ENST00000592242 URB2Q14146 1524 aaKnown RBP22.74■■□□□ 1.23
PPP6R1-208ENST00000592242 CYB5RLQ6IPT4 315 aa22.7■■□□□ 1.22
PPP6R1-208ENST00000592242 TRHP20396 242 aaPredicted RBP22.66■■□□□ 1.22
PPP6R1-208ENST00000592242 WIZO95785 1651 aa22.65■■□□□ 1.22
PPP6R1-208ENST00000592242 ZNF608Q9ULD9 1512 aaPredicted RBP22.58■■□□□ 1.21
PPP6R1-208ENST00000592242 IFT140Q96RY7 1462 aa22.56■■□□□ 1.2
PPP6R1-208ENST00000592242 AEBP2Q6ZN18 517 aaPredicted RBP22.56■■□□□ 1.2
PPP6R1-208ENST00000592242 ARAP1Q96P48 1450 aa22.5■■□□□ 1.19
PPP6R1-208ENST00000592242 RSF1Q96T23 1441 aaPredicted RBP22.4■■□□□ 1.18
PPP6R1-208ENST00000592242 TOP2AP11388 1531 aaKnown RBP22.36■■□□□ 1.17
PPP6R1-208ENST00000592242 TOPBP1Q92547 1522 aa22.36■■□□□ 1.17
PPP6R1-208ENST00000592242 EIF4G3O43432 1585 aaKnown RBP22.33■■□□□ 1.17
PPP6R1-208ENST00000592242 AQRO60306 1485 aaKnown RBP eCLIP22.3■■□□□ 1.162e-7■■■■■ 32.6
PPP6R1-208ENST00000592242 FBLN2P98095 1184 aa22.29■■□□□ 1.16
PPP6R1-208ENST00000592242 ABCC8Q09428 1581 aa22.29■■□□□ 1.16
PPP6R1-208ENST00000592242 CHD1O14646 1710 aa22.26■■□□□ 1.15
PPP6R1-208ENST00000592242 PRDM2Q13029 1718 aa22.23■■□□□ 1.15
PPP6R1-208ENST00000592242 TARBP1Q13395 1621 aaKnown RBP22.18■■□□□ 1.14
PPP6R1-208ENST00000592242 DNMBPQ6XZF7 1577 aa22.16■■□□□ 1.14
PPP6R1-208ENST00000592242 CCDC88BA6NC98 1476 aa22.16■■□□□ 1.14
PPP6R1-208ENST00000592242 CLASP1Q7Z460 1538 aa22.11■■□□□ 1.13
PPP6R1-208ENST00000592242 POLA1P09884 1462 aaPredicted RBP22.09■■□□□ 1.13
PPP6R1-208ENST00000592242 TDRD9Q8NDG6 1382 aaKnown RBP22.06■■□□□ 1.12
PPP6R1-208ENST00000592242 CHMP7Q8WUX9 453 aaPredicted RBP22.04■■□□□ 1.12
PPP6R1-208ENST00000592242 SNAPC4Q5SXM2 1469 aa22.02■■□□□ 1.12
PPP6R1-208ENST00000592242 RAD54L2Q9Y4B4 1467 aa22.02■■□□□ 1.12
PPP6R1-208ENST00000592242 SOGA1O94964 1423 aa22■■□□□ 1.11
PPP6R1-208ENST00000592242 SYNJ1O43426 1573 aa21.99■■□□□ 1.11
PPP6R1-208ENST00000592242 GAPVD1Q14C86 1478 aa21.96■■□□□ 1.11
PPP6R1-208ENST00000592242 MAGI1Q96QZ7 1491 aaPredicted RBP21.95■■□□□ 1.1
PPP6R1-208ENST00000592242 WDR97A6NE52 1622 aa21.91■■□□□ 1.1
PPP6R1-208ENST00000592242 SYNJ2O15056 1496 aa21.89■■□□□ 1.09
PPP6R1-208ENST00000592242 GRIN2BQ13224 1484 aa21.88■■□□□ 1.09
PPP6R1-208ENST00000592242 FGD5Q6ZNL6 1462 aa21.82■■□□□ 1.08
PPP6R1-208ENST00000592242 ILDR1Q86SU0 546 aaPredicted RBP21.71■■□□□ 1.07
PPP6R1-208ENST00000592242 ERCC6L2Q5T890 1561 aa21.7■■□□□ 1.06
PPP6R1-208ENST00000592242 CUX1P39880 1505 aa21.68■■□□□ 1.06
PPP6R1-208ENST00000592242 KDM4FA0A1W2PPD8 638 aa21.61■■□□□ 1.05
PPP6R1-208ENST00000592242 GRIN2AQ12879 1464 aa21.58■■□□□ 1.05
PPP6R1-208ENST00000592242 CEP170Q5SW79 1584 aa21.58■■□□□ 1.05
PPP6R1-208ENST00000592242 NUP160Q12769 1436 aa21.58■■□□□ 1.05
PPP6R1-208ENST00000592242 PBRM1Q86U86 1689 aa21.58■■□□□ 1.05
PPP6R1-208ENST00000592242 ABCA10Q8WWZ4 1543 aa21.56■■□□□ 1.04
PPP6R1-208ENST00000592242 KIF13AQ9H1H9 1805 aa21.55■■□□□ 1.04
PPP6R1-208ENST00000592242 ABCA5Q8WWZ7 1642 aa21.52■■□□□ 1.04
PPP6R1-208ENST00000592242 FAM69CQ0P6D2 419 aa21.52■■□□□ 1.04
PPP6R1-208ENST00000592242 SHROOM2Q13796 1616 aa21.49■■□□□ 1.03
PPP6R1-208ENST00000592242 ABCC10Q5T3U5 1492 aa21.49■■□□□ 1.03
PPP6R1-208ENST00000592242 ADAMTS12P58397 1594 aa21.42■■□□□ 1.02
PPP6R1-208ENST00000592242 PRG4Q92954 1404 aaPredicted RBP21.42■■□□□ 1.02
PPP6R1-208ENST00000592242 FHAD1B1AJZ9 1412 aa21.41■■□□□ 1.02
PPP6R1-208ENST00000592242 NPM1P06748 294 aaKnown RBP eCLIP21.4■■□□□ 1.02
PPP6R1-208ENST00000592242 JPH4Q96JJ6 628 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms