RNA–Protein interactions for RNA: ENST00000552286.5

MTA1-220, Transcript of metastasis associated 1, humanhuman

TSL 2

Gene MTA1, Length 1,943 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-220ENST00000552286 NISCHQ9Y2I1 1504 aa44.47■■■■■ 4.71
MTA1-220ENST00000552286 CCDC180Q9P1Z9 1646 aa38.97■■■■□ 3.83
MTA1-220ENST00000552286 ZCCHC6Q5VYS8 1495 aaKnown RBP37.31■■■■□ 3.56
MTA1-220ENST00000552286 ABCC9O60706 1549 aa37.11■■■■□ 3.53
MTA1-220ENST00000552286 DCAF8L2P0C7V8 631 aa36.82■■■■□ 3.48
MTA1-220ENST00000552286 DCAF1Q9Y4B6 1507 aa36.75■■■■□ 3.47
MTA1-220ENST00000552286 MYO15BQ96JP2 1530 aa36.43■■■■□ 3.42
MTA1-220ENST00000552286 NACADO15069 1562 aa36.33■■■■□ 3.41
MTA1-220ENST00000552286 RB1CC1Q8TDY2 1594 aa36.12■■■■□ 3.37
MTA1-220ENST00000552286 SHROOM4Q9ULL8 1493 aa36.07■■■■□ 3.36
MTA1-220ENST00000552286 SCRIBQ14160 1630 aa35.81■■■■□ 3.32
MTA1-220ENST00000552286 UNC13AQ9UPW8 1703 aa35.43■■■■□ 3.26
MTA1-220ENST00000552286 BICRAQ9NZM4 1560 aa35.02■■■■□ 3.2
MTA1-220ENST00000552286 PABPN1Q86U42 306 aaKnown RBP eCLIP34.9■■■■□ 3.187e-8■■□□□ 13.2
MTA1-220ENST00000552286 CECR2Q9BXF3 1484 aa34.58■■■■□ 3.13
MTA1-220ENST00000552286 SUPT5HO00267 1087 aaKnown RBP34.53■■■■□ 3.12
MTA1-220ENST00000552286 BAZ1AQ9NRL2 1556 aaPredicted RBP34.38■■■■□ 3.09
MTA1-220ENST00000552286 RSF1Q96T23 1441 aaPredicted RBP34.35■■■■□ 3.09
MTA1-220ENST00000552286 MROH2BQ7Z745 1585 aa34.35■■■■□ 3.09
MTA1-220ENST00000552286 SMARCA4P51532 1647 aa34.28■■■■□ 3.08
MTA1-220ENST00000552286 WIZO95785 1651 aa34.08■■■■□ 3.05
MTA1-220ENST00000552286 EIF4G1Q04637 1599 aaKnown RBP34.01■■■■□ 3.03
MTA1-220ENST00000552286 PEG3Q9GZU2 1588 aa33.85■■■■□ 3.01
MTA1-220ENST00000552286 ATAD2BQ9ULI0 1458 aa33.76■■■■□ 3
MTA1-220ENST00000552286 SMARCA2P51531 1590 aa33.76■■■□□ 2.99
MTA1-220ENST00000552286 TOP2AP11388 1531 aaKnown RBP33.71■■■□□ 2.99
MTA1-220ENST00000552286 CC2D2AQ9P2K1 1620 aa33.59■■■□□ 2.97
MTA1-220ENST00000552286 BAZ1BQ9UIG0 1483 aaKnown RBP33.58■■■□□ 2.97
MTA1-220ENST00000552286 NCAPD3P42695 1498 aa33.5■■■□□ 2.95
MTA1-220ENST00000552286 HMGXB3Q12766 1538 aa33.48■■■□□ 2.95
MTA1-220ENST00000552286 CCDC88BA6NC98 1476 aa33.33■■■□□ 2.93
MTA1-220ENST00000552286 CHIC1Q5VXU3 224 aa33.32■■■□□ 2.92
MTA1-220ENST00000552286 DNAJC5BQ9UF47 199 aa32.95■■■□□ 2.87
MTA1-220ENST00000552286 CFTRP13569 1480 aa32.69■■■□□ 2.82
MTA1-220ENST00000552286 CADPSQ9ULU8 1353 aa32.63■■■□□ 2.81
MTA1-220ENST00000552286 PRDM2Q13029 1718 aa32.59■■■□□ 2.81
MTA1-220ENST00000552286 ABCC8Q09428 1581 aa32.57■■■□□ 2.8
MTA1-220ENST00000552286 NESP48681 1621 aa32.48■■■□□ 2.79
MTA1-220ENST00000552286 TRIM41Q8WV44 630 aa32.47■■■□□ 2.79
MTA1-220ENST00000552286 LAMC3Q9Y6N6 1575 aa32.47■■■□□ 2.79
MTA1-220ENST00000552286 WRNQ14191 1432 aaPredicted RBP eCLIP32.37■■■□□ 2.77
MTA1-220ENST00000552286 FANCD2Q9BXW9 1451 aa32.3■■■□□ 2.76
MTA1-220ENST00000552286 SYNJ1O43426 1573 aa32.28■■■□□ 2.76
MTA1-220ENST00000552286 PDS5BQ9NTI5 1447 aa32.2■■■□□ 2.74
MTA1-220ENST00000552286 TOP2BQ02880 1626 aa32.16■■■□□ 2.74
MTA1-220ENST00000552286 BIVM-ERCC5R4GMW8 1640 aa32.15■■■□□ 2.74
MTA1-220ENST00000552286 CUX1P39880 1505 aa32.15■■■□□ 2.74
MTA1-220ENST00000552286 CEP164Q9UPV0 1460 aa32.14■■■□□ 2.74
MTA1-220ENST00000552286 KIF21AQ7Z4S6 1674 aa32.14■■■□□ 2.73
MTA1-220ENST00000552286 LOC105371045A0A1W2PR82 267 aa32.12■■■□□ 2.73
MTA1-220ENST00000552286 DNMBPQ6XZF7 1577 aa31.97■■■□□ 2.71
MTA1-220ENST00000552286 URB2Q14146 1524 aaKnown RBP31.91■■■□□ 2.7
MTA1-220ENST00000552286 TOPBP1Q92547 1522 aa31.91■■■□□ 2.7
MTA1-220ENST00000552286 FAM9AQ8IZU1 332 aaPredicted RBP31.88■■■□□ 2.69
MTA1-220ENST00000552286 ERCC6Q03468 1493 aa31.87■■■□□ 2.69
MTA1-220ENST00000552286 SOGA1O94964 1423 aa31.85■■■□□ 2.69
MTA1-220ENST00000552286 FGD5Q6ZNL6 1462 aa31.85■■■□□ 2.69
MTA1-220ENST00000552286 MRC2Q9UBG0 1479 aa31.82■■■□□ 2.68
MTA1-220ENST00000552286 RUSC2Q8N2Y8 1516 aa31.76■■■□□ 2.67
MTA1-220ENST00000552286 POLA1P09884 1462 aaPredicted RBP31.74■■■□□ 2.67
MTA1-220ENST00000552286 EEA1Q15075 1411 aa31.72■■■□□ 2.67
MTA1-220ENST00000552286 WDR62O43379 1518 aa31.67■■■□□ 2.66
MTA1-220ENST00000552286 THOC2Q8NI27 1593 aaKnown RBP31.67■■■□□ 2.66
MTA1-220ENST00000552286 RAD54L2Q9Y4B4 1467 aa31.63■■■□□ 2.65
MTA1-220ENST00000552286 CUX2O14529 1486 aa31.58■■■□□ 2.65
MTA1-220ENST00000552286 KIF27Q86VH2 1401 aa31.57■■■□□ 2.65
MTA1-220ENST00000552286 CSRNP3Q8WYN3 585 aa31.55■■■□□ 2.64
MTA1-220ENST00000552286 ABCA10Q8WWZ4 1543 aa31.54■■■□□ 2.64
MTA1-220ENST00000552286 WDR97A6NE52 1622 aa31.52■■■□□ 2.64
MTA1-220ENST00000552286 TARBP1Q13395 1621 aaKnown RBP31.48■■■□□ 2.63
MTA1-220ENST00000552286 EHMT2Q96KQ7 1210 aa31.47■■■□□ 2.63
MTA1-220ENST00000552286 IFT140Q96RY7 1462 aa31.37■■■□□ 2.61
MTA1-220ENST00000552286 KIF21BO75037 1637 aa31.36■■■□□ 2.61
MTA1-220ENST00000552286 ABCA5Q8WWZ7 1642 aa31.35■■■□□ 2.61
MTA1-220ENST00000552286 TDRD9Q8NDG6 1382 aaKnown RBP31.33■■■□□ 2.61
MTA1-220ENST00000552286 GOLGA3Q08378 1498 aa31.29■■■□□ 2.6
MTA1-220ENST00000552286 IGF1RP08069 1367 aa31.29■■■□□ 2.6
MTA1-220ENST00000552286 GAPVD1Q14C86 1478 aa31.27■■■□□ 2.6
MTA1-220ENST00000552286 PRXQ9BXM0 1461 aa31.27■■■□□ 2.6
MTA1-220ENST00000552286 RAPGEF2Q9Y4G8 1499 aa31.24■■■□□ 2.59
MTA1-220ENST00000552286 PCGF6Q9BYE7 350 aa31.23■■■□□ 2.59
MTA1-220ENST00000552286 ZNF608Q9ULD9 1512 aaPredicted RBP31.22■■■□□ 2.59
MTA1-220ENST00000552286 ERICH3Q5RHP9 1530 aa31.2■■■□□ 2.59
MTA1-220ENST00000552286 AQRO60306 1485 aaKnown RBP eCLIP31.2■■■□□ 2.581e-9■■□□□ 12.9
MTA1-220ENST00000552286 PBRM1Q86U86 1689 aa31.18■■■□□ 2.58
MTA1-220ENST00000552286 CUL7Q14999 1698 aa31.16■■■□□ 2.58
MTA1-220ENST00000552286 EIF4G3O43432 1585 aaKnown RBP31.15■■■□□ 2.58
MTA1-220ENST00000552286 UBTFP17480 764 aaKnown RBP31.15■■■□□ 2.58
MTA1-220ENST00000552286 CARMIL1Q5VZK9 1371 aa31.14■■■□□ 2.58
MTA1-220ENST00000552286 TNIKQ9UKE5 1360 aa31.09■■■□□ 2.57
MTA1-220ENST00000552286 GRIN2BQ13224 1484 aa31.07■■■□□ 2.56
MTA1-220ENST00000552286 TRIM26Q12899 539 aaPredicted RBP31.04■■■□□ 2.56
MTA1-220ENST00000552286 ADAMTS12P58397 1594 aa30.97■■■□□ 2.55
MTA1-220ENST00000552286 CEP162Q5TB80 1403 aa30.95■■■□□ 2.54
MTA1-220ENST00000552286 SNAPC4Q5SXM2 1469 aa30.93■■■□□ 2.54
MTA1-220ENST00000552286 FHAD1B1AJZ9 1412 aa30.92■■■□□ 2.54
MTA1-220ENST00000552286 MAGI1Q96QZ7 1491 aaPredicted RBP30.85■■■□□ 2.53
MTA1-220ENST00000552286 CTTNBP2Q8WZ74 1663 aa30.79■■■□□ 2.52
MTA1-220ENST00000552286 CLIP1P30622 1438 aa30.77■■■□□ 2.52
MTA1-220ENST00000552286 RANGAP1P46060 587 aaPredicted RBP30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms