RNA–Protein interactions for RNA: ENST00000469140.2

MTA1-209, Transcript of metastasis associated 1, humanhuman

TSL 5

Gene MTA1, Length 1,666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-209ENST00000469140 NISCHQ9Y2I1 1504 aa54.47■■■■■ 6.31
MTA1-209ENST00000469140 CCDC180Q9P1Z9 1646 aa47.74■■■■■ 5.23
MTA1-209ENST00000469140 ZCCHC6Q5VYS8 1495 aaKnown RBP45.66■■■■■ 4.9
MTA1-209ENST00000469140 ABCC9O60706 1549 aa45.47■■■■■ 4.87
MTA1-209ENST00000469140 DCAF1Q9Y4B6 1507 aa45.12■■■■■ 4.81
MTA1-209ENST00000469140 DCAF8L2P0C7V8 631 aa45.05■■■■■ 4.8
MTA1-209ENST00000469140 MYO15BQ96JP2 1530 aa44.79■■■■■ 4.76
MTA1-209ENST00000469140 NACADO15069 1562 aa44.61■■■■■ 4.73
MTA1-209ENST00000469140 RB1CC1Q8TDY2 1594 aa44.31■■■■■ 4.68
MTA1-209ENST00000469140 SHROOM4Q9ULL8 1493 aa43.94■■■■■ 4.62
MTA1-209ENST00000469140 SCRIBQ14160 1630 aa43.72■■■■■ 4.59
MTA1-209ENST00000469140 UNC13AQ9UPW8 1703 aa43.27■■■■■ 4.52
MTA1-209ENST00000469140 BICRAQ9NZM4 1560 aa42.92■■■■■ 4.46
MTA1-209ENST00000469140 PABPN1Q86U42 306 aaKnown RBP eCLIP42.78■■■■■ 4.442e-7■□□□□ 10.7
MTA1-209ENST00000469140 CECR2Q9BXF3 1484 aa42.29■■■■■ 4.36
MTA1-209ENST00000469140 BAZ1AQ9NRL2 1556 aaPredicted RBP42.12■■■■■ 4.33
MTA1-209ENST00000469140 SUPT5HO00267 1087 aaKnown RBP42.09■■■■■ 4.33
MTA1-209ENST00000469140 RSF1Q96T23 1441 aaPredicted RBP42.06■■■■■ 4.32
MTA1-209ENST00000469140 MROH2BQ7Z745 1585 aa42.01■■■■■ 4.32
MTA1-209ENST00000469140 SMARCA4P51532 1647 aa41.94■■■■■ 4.31
MTA1-209ENST00000469140 EIF4G1Q04637 1599 aaKnown RBP41.69■■■■■ 4.26
MTA1-209ENST00000469140 WIZO95785 1651 aa41.61■■■■■ 4.25
MTA1-209ENST00000469140 PEG3Q9GZU2 1588 aa41.51■■■■■ 4.24
MTA1-209ENST00000469140 SMARCA2P51531 1590 aa41.4■■■■■ 4.22
MTA1-209ENST00000469140 ATAD2BQ9ULI0 1458 aa41.4■■■■■ 4.22
MTA1-209ENST00000469140 TOP2AP11388 1531 aaKnown RBP41.25■■■■■ 4.19
MTA1-209ENST00000469140 NCAPD3P42695 1498 aa41.17■■■■■ 4.18
MTA1-209ENST00000469140 CC2D2AQ9P2K1 1620 aa41.16■■■■■ 4.18
MTA1-209ENST00000469140 BAZ1BQ9UIG0 1483 aaKnown RBP41.14■■■■■ 4.18
MTA1-209ENST00000469140 HMGXB3Q12766 1538 aa41.06■■■■■ 4.16
MTA1-209ENST00000469140 CCDC88BA6NC98 1476 aa40.79■■■■■ 4.12
MTA1-209ENST00000469140 DNAJC5BQ9UF47 199 aa40.51■■■■■ 4.08
MTA1-209ENST00000469140 CFTRP13569 1480 aa40.1■■■■■ 4.01
MTA1-209ENST00000469140 CHIC1Q5VXU3 224 aa40.09■■■■■ 4.01
MTA1-209ENST00000469140 CADPSQ9ULU8 1353 aa40.07■■■■■ 4.01
MTA1-209ENST00000469140 LAMC3Q9Y6N6 1575 aa39.83■■■■□ 3.97
MTA1-209ENST00000469140 PRDM2Q13029 1718 aa39.81■■■■□ 3.96
MTA1-209ENST00000469140 NESP48681 1621 aa39.75■■■■□ 3.95
MTA1-209ENST00000469140 ABCC8Q09428 1581 aa39.71■■■■□ 3.95
MTA1-209ENST00000469140 TRIM41Q8WV44 630 aa39.7■■■■□ 3.95
MTA1-209ENST00000469140 WRNQ14191 1432 aaPredicted RBP eCLIP39.61■■■■□ 3.93
MTA1-209ENST00000469140 FANCD2Q9BXW9 1451 aa39.58■■■■□ 3.93
MTA1-209ENST00000469140 PDS5BQ9NTI5 1447 aa39.56■■■■□ 3.92
MTA1-209ENST00000469140 SYNJ1O43426 1573 aa39.4■■■■□ 3.9
MTA1-209ENST00000469140 CEP164Q9UPV0 1460 aa39.4■■■■□ 3.9
MTA1-209ENST00000469140 TOP2BQ02880 1626 aa39.34■■■■□ 3.89
MTA1-209ENST00000469140 CUX1P39880 1505 aa39.32■■■■□ 3.88
MTA1-209ENST00000469140 BIVM-ERCC5R4GMW8 1640 aa39.3■■■■□ 3.88
MTA1-209ENST00000469140 KIF21AQ7Z4S6 1674 aa39.27■■■■□ 3.88
MTA1-209ENST00000469140 DNMBPQ6XZF7 1577 aa39.15■■■■□ 3.86
MTA1-209ENST00000469140 TOPBP1Q92547 1522 aa39.1■■■■□ 3.85
MTA1-209ENST00000469140 ERCC6Q03468 1493 aa39.09■■■■□ 3.85
MTA1-209ENST00000469140 URB2Q14146 1524 aaKnown RBP39.09■■■■□ 3.85
MTA1-209ENST00000469140 MRC2Q9UBG0 1479 aa39.04■■■■□ 3.84
MTA1-209ENST00000469140 FGD5Q6ZNL6 1462 aa38.97■■■■□ 3.83
MTA1-209ENST00000469140 SOGA1O94964 1423 aa38.9■■■■□ 3.82
MTA1-209ENST00000469140 EEA1Q15075 1411 aa38.87■■■■□ 3.81
MTA1-209ENST00000469140 POLA1P09884 1462 aaPredicted RBP38.87■■■■□ 3.81
MTA1-209ENST00000469140 WDR62O43379 1518 aa38.85■■■■□ 3.81
MTA1-209ENST00000469140 FAM9AQ8IZU1 332 aaPredicted RBP38.84■■■■□ 3.81
MTA1-209ENST00000469140 THOC2Q8NI27 1593 aaKnown RBP38.8■■■■□ 3.8
MTA1-209ENST00000469140 RUSC2Q8N2Y8 1516 aa38.75■■■■□ 3.79
MTA1-209ENST00000469140 RAD54L2Q9Y4B4 1467 aa38.7■■■■□ 3.79
MTA1-209ENST00000469140 KIF27Q86VH2 1401 aa38.68■■■■□ 3.78
MTA1-209ENST00000469140 ABCA10Q8WWZ4 1543 aa38.67■■■■□ 3.78
MTA1-209ENST00000469140 CSRNP3Q8WYN3 585 aa38.65■■■■□ 3.78
MTA1-209ENST00000469140 CUX2O14529 1486 aa38.64■■■■□ 3.78
MTA1-209ENST00000469140 TARBP1Q13395 1621 aaKnown RBP38.55■■■■□ 3.76
MTA1-209ENST00000469140 WDR97A6NE52 1622 aa38.52■■■■□ 3.76
MTA1-209ENST00000469140 IFT140Q96RY7 1462 aa38.52■■■■□ 3.76
MTA1-209ENST00000469140 LOC105371045A0A1W2PR82 267 aa38.47■■■■□ 3.75
MTA1-209ENST00000469140 TDRD9Q8NDG6 1382 aaKnown RBP38.38■■■■□ 3.74
MTA1-209ENST00000469140 IGF1RP08069 1367 aa38.37■■■■□ 3.73
MTA1-209ENST00000469140 ABCA5Q8WWZ7 1642 aa38.35■■■■□ 3.73
MTA1-209ENST00000469140 GAPVD1Q14C86 1478 aa38.33■■■■□ 3.73
MTA1-209ENST00000469140 KIF21BO75037 1637 aa38.31■■■■□ 3.72
MTA1-209ENST00000469140 PRXQ9BXM0 1461 aa38.28■■■■□ 3.72
MTA1-209ENST00000469140 GOLGA3Q08378 1498 aa38.24■■■■□ 3.71
MTA1-209ENST00000469140 ZNF608Q9ULD9 1512 aaPredicted RBP38.23■■■■□ 3.71
MTA1-209ENST00000469140 EHMT2Q96KQ7 1210 aa38.23■■■■□ 3.71
MTA1-209ENST00000469140 ERICH3Q5RHP9 1530 aa38.22■■■■□ 3.71
MTA1-209ENST00000469140 AQRO60306 1485 aaKnown RBP eCLIP38.22■■■■□ 3.711e-7■■■■■ 28.8
MTA1-209ENST00000469140 CARMIL1Q5VZK9 1371 aa38.17■■■■□ 3.7
MTA1-209ENST00000469140 RAPGEF2Q9Y4G8 1499 aa38.14■■■■□ 3.7
MTA1-209ENST00000469140 GRIN2BQ13224 1484 aa38.12■■■■□ 3.69
MTA1-209ENST00000469140 CUL7Q14999 1698 aa38.11■■■■□ 3.69
MTA1-209ENST00000469140 EIF4G3O43432 1585 aaKnown RBP38.1■■■■□ 3.69
MTA1-209ENST00000469140 PBRM1Q86U86 1689 aa38.08■■■■□ 3.69
MTA1-209ENST00000469140 UBTFP17480 764 aaKnown RBP38.07■■■■□ 3.68
MTA1-209ENST00000469140 TNIKQ9UKE5 1360 aa38.05■■■■□ 3.68
MTA1-209ENST00000469140 FHAD1B1AJZ9 1412 aa37.93■■■■□ 3.66
MTA1-209ENST00000469140 ADAMTS12P58397 1594 aa37.88■■■■□ 3.66
MTA1-209ENST00000469140 SNAPC4Q5SXM2 1469 aa37.87■■■■□ 3.65
MTA1-209ENST00000469140 MAGI1Q96QZ7 1491 aaPredicted RBP37.87■■■■□ 3.65
MTA1-209ENST00000469140 CEP162Q5TB80 1403 aa37.75■■■■□ 3.63
MTA1-209ENST00000469140 SYNJ2O15056 1496 aa37.7■■■■□ 3.63
MTA1-209ENST00000469140 CHMP7Q8WUX9 453 aaPredicted RBP37.63■■■■□ 3.62
MTA1-209ENST00000469140 GRIN2AQ12879 1464 aa37.63■■■■□ 3.61
MTA1-209ENST00000469140 CLIP1P30622 1438 aa37.6■■■■□ 3.61
MTA1-209ENST00000469140 CTTNBP2Q8WZ74 1663 aa37.57■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms