RNA–Protein interactions for RNA: ENST00000397297.7

MRPL23-204, Transcript of mitochondrial ribosomal protein L23, humanhuman

TSL 2 BASIC

Gene MRPL23, Length 613 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL23-204ENST00000397297 NISCHQ9Y2I1 1504 aa35.53■■■■□ 3.28
MRPL23-204ENST00000397297 CCDC180Q9P1Z9 1646 aa31.48■■■□□ 2.63
MRPL23-204ENST00000397297 ABCC9O60706 1549 aa30.67■■■□□ 2.5
MRPL23-204ENST00000397297 DCAF8L2P0C7V8 631 aa29.71■■■□□ 2.35
MRPL23-204ENST00000397297 ZCCHC6Q5VYS8 1495 aaKnown RBP29.65■■■□□ 2.34
MRPL23-204ENST00000397297 RB1CC1Q8TDY2 1594 aa29.56■■■□□ 2.32
MRPL23-204ENST00000397297 NACADO15069 1562 aa29.56■■■□□ 2.32
MRPL23-204ENST00000397297 MYO15BQ96JP2 1530 aa29.41■■■□□ 2.3
MRPL23-204ENST00000397297 DCAF1Q9Y4B6 1507 aa29.38■■■□□ 2.29
MRPL23-204ENST00000397297 SCRIBQ14160 1630 aa28.81■■■□□ 2.2
MRPL23-204ENST00000397297 UNC13AQ9UPW8 1703 aa28.8■■■□□ 2.2
MRPL23-204ENST00000397297 PABPN1Q86U42 306 aaKnown RBP eCLIP28.7■■■□□ 2.18
MRPL23-204ENST00000397297 BICRAQ9NZM4 1560 aa28.6■■■□□ 2.17
MRPL23-204ENST00000397297 SHROOM4Q9ULL8 1493 aa28.35■■■□□ 2.13
MRPL23-204ENST00000397297 EIF4G1Q04637 1599 aaKnown RBP27.88■■■□□ 2.05
MRPL23-204ENST00000397297 DNAJC5BQ9UF47 199 aa27.87■■■□□ 2.05
MRPL23-204ENST00000397297 CC2D2AQ9P2K1 1620 aa27.71■■■□□ 2.03
MRPL23-204ENST00000397297 CECR2Q9BXF3 1484 aa27.66■■■□□ 2.02
MRPL23-204ENST00000397297 BAZ1AQ9NRL2 1556 aaPredicted RBP27.55■■■□□ 2
MRPL23-204ENST00000397297 SMARCA4P51532 1647 aa27.53■■■□□ 2
MRPL23-204ENST00000397297 MROH2BQ7Z745 1585 aa27.39■■□□□ 1.98
MRPL23-204ENST00000397297 ATAD2BQ9ULI0 1458 aa27.32■■□□□ 1.96
MRPL23-204ENST00000397297 SMARCA2P51531 1590 aa27.31■■□□□ 1.96
MRPL23-204ENST00000397297 NCAPD3P42695 1498 aa27.25■■□□□ 1.95
MRPL23-204ENST00000397297 PEG3Q9GZU2 1588 aa27.22■■□□□ 1.95
MRPL23-204ENST00000397297 HMGXB3Q12766 1538 aa27.16■■□□□ 1.94
MRPL23-204ENST00000397297 BAZ1BQ9UIG0 1483 aaKnown RBP27.16■■□□□ 1.94
MRPL23-204ENST00000397297 RSF1Q96T23 1441 aaPredicted RBP27.16■■□□□ 1.94
MRPL23-204ENST00000397297 WIZO95785 1651 aa27.11■■□□□ 1.93
MRPL23-204ENST00000397297 TOP2AP11388 1531 aaKnown RBP26.85■■□□□ 1.89
MRPL23-204ENST00000397297 SUPT5HO00267 1087 aaKnown RBP26.72■■□□□ 1.87
MRPL23-204ENST00000397297 NESP48681 1621 aa26.57■■□□□ 1.84
MRPL23-204ENST00000397297 LAMC3Q9Y6N6 1575 aa26.53■■□□□ 1.84
MRPL23-204ENST00000397297 CCDC88BA6NC98 1476 aa26.52■■□□□ 1.84
MRPL23-204ENST00000397297 CADPSQ9ULU8 1353 aa26.51■■□□□ 1.83
MRPL23-204ENST00000397297 ERCC6Q03468 1493 aa26.46■■□□□ 1.83
MRPL23-204ENST00000397297 PDS5BQ9NTI5 1447 aa26.38■■□□□ 1.81
MRPL23-204ENST00000397297 CFTRP13569 1480 aa26.37■■□□□ 1.81
MRPL23-204ENST00000397297 KIF21AQ7Z4S6 1674 aa26.24■■□□□ 1.79
MRPL23-204ENST00000397297 FANCD2Q9BXW9 1451 aa26.23■■□□□ 1.79
MRPL23-204ENST00000397297 CEP164Q9UPV0 1460 aa26.18■■□□□ 1.78
MRPL23-204ENST00000397297 PRDM2Q13029 1718 aa26.16■■□□□ 1.78
MRPL23-204ENST00000397297 THOC2Q8NI27 1593 aaKnown RBP26.11■■□□□ 1.77
MRPL23-204ENST00000397297 MRC2Q9UBG0 1479 aa26.09■■□□□ 1.77
MRPL23-204ENST00000397297 CUX2O14529 1486 aa26.03■■□□□ 1.76
MRPL23-204ENST00000397297 WDR62O43379 1518 aa25.97■■□□□ 1.75
MRPL23-204ENST00000397297 URB2Q14146 1524 aaKnown RBP25.92■■□□□ 1.74
MRPL23-204ENST00000397297 ABCC8Q09428 1581 aa25.82■■□□□ 1.72
MRPL23-204ENST00000397297 TOPBP1Q92547 1522 aa25.81■■□□□ 1.72
MRPL23-204ENST00000397297 DNMBPQ6XZF7 1577 aa25.81■■□□□ 1.72
MRPL23-204ENST00000397297 CUX1P39880 1505 aa25.69■■□□□ 1.7
MRPL23-204ENST00000397297 WRNQ14191 1432 aaPredicted RBP eCLIP25.64■■□□□ 1.7
MRPL23-204ENST00000397297 POLA1P09884 1462 aaPredicted RBP25.61■■□□□ 1.69
MRPL23-204ENST00000397297 IFT140Q96RY7 1462 aa25.61■■□□□ 1.69
MRPL23-204ENST00000397297 FGD5Q6ZNL6 1462 aa25.6■■□□□ 1.69
MRPL23-204ENST00000397297 SYNJ1O43426 1573 aa25.54■■□□□ 1.68
MRPL23-204ENST00000397297 TOP2BQ02880 1626 aa25.52■■□□□ 1.68
MRPL23-204ENST00000397297 SOGA1O94964 1423 aa25.52■■□□□ 1.68
MRPL23-204ENST00000397297 RAD54L2Q9Y4B4 1467 aa25.51■■□□□ 1.67
MRPL23-204ENST00000397297 BIVM-ERCC5R4GMW8 1640 aa25.51■■□□□ 1.67
MRPL23-204ENST00000397297 TARBP1Q13395 1621 aaKnown RBP25.48■■□□□ 1.67
MRPL23-204ENST00000397297 ZNF608Q9ULD9 1512 aaPredicted RBP25.47■■□□□ 1.67
MRPL23-204ENST00000397297 EIF4G3O43432 1585 aaKnown RBP25.39■■□□□ 1.66
MRPL23-204ENST00000397297 AQRO60306 1485 aaKnown RBP eCLIP25.36■■□□□ 1.65
MRPL23-204ENST00000397297 TDRD9Q8NDG6 1382 aaKnown RBP25.36■■□□□ 1.65
MRPL23-204ENST00000397297 ABCA10Q8WWZ4 1543 aa25.33■■□□□ 1.65
MRPL23-204ENST00000397297 WDR97A6NE52 1622 aa25.32■■□□□ 1.64
MRPL23-204ENST00000397297 GAPVD1Q14C86 1478 aa25.22■■□□□ 1.63
MRPL23-204ENST00000397297 TRIM41Q8WV44 630 aa25.22■■□□□ 1.63
MRPL23-204ENST00000397297 ABCA5Q8WWZ7 1642 aa25.21■■□□□ 1.63
MRPL23-204ENST00000397297 GRIN2BQ13224 1484 aa25.2■■□□□ 1.62
MRPL23-204ENST00000397297 SNAPC4Q5SXM2 1469 aa25.15■■□□□ 1.62
MRPL23-204ENST00000397297 PBRM1Q86U86 1689 aa25.14■■□□□ 1.62
MRPL23-204ENST00000397297 MAGI1Q96QZ7 1491 aaPredicted RBP25.1■■□□□ 1.61
MRPL23-204ENST00000397297 KIF27Q86VH2 1401 aa25.09■■□□□ 1.61
MRPL23-204ENST00000397297 FBLN2P98095 1184 aa25.08■■□□□ 1.61
MRPL23-204ENST00000397297 ERICH3Q5RHP9 1530 aa25.04■■□□□ 1.6
MRPL23-204ENST00000397297 CHMP7Q8WUX9 453 aaPredicted RBP25.01■■□□□ 1.59
MRPL23-204ENST00000397297 SYNJ2O15056 1496 aa25.01■■□□□ 1.59
MRPL23-204ENST00000397297 OSCARQ8IYS5 282 aa25■■□□□ 1.59
MRPL23-204ENST00000397297 CHD1O14646 1710 aa24.99■■□□□ 1.59
MRPL23-204ENST00000397297 CHIC1Q5VXU3 224 aa24.99■■□□□ 1.59
MRPL23-204ENST00000397297 ADAMTS12P58397 1594 aa24.98■■□□□ 1.59
MRPL23-204ENST00000397297 FHAD1B1AJZ9 1412 aa24.95■■□□□ 1.58
MRPL23-204ENST00000397297 DNAJC5Q9H3Z4 198 aa24.94■■□□□ 1.58
MRPL23-204ENST00000397297 IGF1RP08069 1367 aa24.92■■□□□ 1.58
MRPL23-204ENST00000397297 RUSC2Q8N2Y8 1516 aa24.9■■□□□ 1.58
MRPL23-204ENST00000397297 GRIN2AQ12879 1464 aa24.87■■□□□ 1.57
MRPL23-204ENST00000397297 CUL7Q14999 1698 aa24.87■■□□□ 1.57
MRPL23-204ENST00000397297 CARMIL1Q5VZK9 1371 aa24.8■■□□□ 1.56
MRPL23-204ENST00000397297 EEA1Q15075 1411 aa24.75■■□□□ 1.55
MRPL23-204ENST00000397297 CEP170Q5SW79 1584 aa24.73■■□□□ 1.55
MRPL23-204ENST00000397297 CLASP1Q7Z460 1538 aa24.73■■□□□ 1.55
MRPL23-204ENST00000397297 NUP160Q12769 1436 aa24.73■■□□□ 1.55
MRPL23-204ENST00000397297 FAM9AQ8IZU1 332 aaPredicted RBP24.72■■□□□ 1.55
MRPL23-204ENST00000397297 RAPGEF2Q9Y4G8 1499 aa24.69■■□□□ 1.54
MRPL23-204ENST00000397297 CSRNP3Q8WYN3 585 aa24.68■■□□□ 1.54
MRPL23-204ENST00000397297 PRXQ9BXM0 1461 aa24.62■■□□□ 1.53
MRPL23-204ENST00000397297 ARHGEF11O15085 1522 aa24.6■■□□□ 1.53
MRPL23-204ENST00000397297 RIMBP3CA6NJZ7 1639 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms