Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NPAP1Q9NZP6 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.29■■□□□ 1.16
NPAP1Q9NZP6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
NPAP1Q9NZP6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC22.29■■□□□ 1.16
NPAP1Q9NZP6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NPAP1Q9NZP6 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
NPAP1Q9NZP6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NPAP1Q9NZP6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
NPAP1Q9NZP6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.28■■□□□ 1.16
NPAP1Q9NZP6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.28■■□□□ 1.16
NPAP1Q9NZP6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NPAP1Q9NZP6 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.28■■□□□ 1.16
NPAP1Q9NZP6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NPAP1Q9NZP6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NPAP1Q9NZP6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
NPAP1Q9NZP6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
NPAP1Q9NZP6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NPAP1Q9NZP6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
NPAP1Q9NZP6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
NPAP1Q9NZP6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NPAP1Q9NZP6 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
NPAP1Q9NZP6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
NPAP1Q9NZP6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
NPAP1Q9NZP6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NPAP1Q9NZP6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
NPAP1Q9NZP6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NPAP1Q9NZP6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NPAP1Q9NZP6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NPAP1Q9NZP6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
NPAP1Q9NZP6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NPAP1Q9NZP6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
NPAP1Q9NZP6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.25■■□□□ 1.15
NPAP1Q9NZP6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
NPAP1Q9NZP6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
NPAP1Q9NZP6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NPAP1Q9NZP6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NPAP1Q9NZP6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.25■■□□□ 1.15
NPAP1Q9NZP6 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
NPAP1Q9NZP6 AC091060.1-201ENST00000623524 1766 ntBASIC22.25■■□□□ 1.15
NPAP1Q9NZP6 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NPAP1Q9NZP6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NPAP1Q9NZP6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NPAP1Q9NZP6 AC110285.7-201ENST00000624417 1536 ntBASIC22.24■■□□□ 1.15
NPAP1Q9NZP6 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.24■■□□□ 1.15
NPAP1Q9NZP6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NPAP1Q9NZP6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NPAP1Q9NZP6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.23■■□□□ 1.15
NPAP1Q9NZP6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NPAP1Q9NZP6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NPAP1Q9NZP6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
NPAP1Q9NZP6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
NPAP1Q9NZP6 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NPAP1Q9NZP6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.22■■□□□ 1.15
NPAP1Q9NZP6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NPAP1Q9NZP6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NPAP1Q9NZP6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.22■■□□□ 1.15
NPAP1Q9NZP6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
NPAP1Q9NZP6 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
NPAP1Q9NZP6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
NPAP1Q9NZP6 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
NPAP1Q9NZP6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
NPAP1Q9NZP6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NPAP1Q9NZP6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NPAP1Q9NZP6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
NPAP1Q9NZP6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.15
NPAP1Q9NZP6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
NPAP1Q9NZP6 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
NPAP1Q9NZP6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NPAP1Q9NZP6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NPAP1Q9NZP6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
NPAP1Q9NZP6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NPAP1Q9NZP6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NPAP1Q9NZP6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NPAP1Q9NZP6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
NPAP1Q9NZP6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
NPAP1Q9NZP6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
NPAP1Q9NZP6 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
NPAP1Q9NZP6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.2■■□□□ 1.14
NPAP1Q9NZP6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
NPAP1Q9NZP6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.19■■□□□ 1.14
NPAP1Q9NZP6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
NPAP1Q9NZP6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.19■■□□□ 1.14
NPAP1Q9NZP6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.19■■□□□ 1.14
NPAP1Q9NZP6 AP004833.2-201ENST00000532228 1454 ntBASIC22.19■■□□□ 1.14
NPAP1Q9NZP6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
NPAP1Q9NZP6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NPAP1Q9NZP6 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.19■■□□□ 1.14
NPAP1Q9NZP6 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
NPAP1Q9NZP6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
NPAP1Q9NZP6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NPAP1Q9NZP6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NPAP1Q9NZP6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.18■■□□□ 1.14
NPAP1Q9NZP6 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.18■■□□□ 1.14
NPAP1Q9NZP6 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
NPAP1Q9NZP6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
NPAP1Q9NZP6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NPAP1Q9NZP6 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.17■■□□□ 1.14
NPAP1Q9NZP6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
NPAP1Q9NZP6 HSD17B1P1-201ENST00000590052 955 ntBASIC22.17■■□□□ 1.14
NPAP1Q9NZP6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms