RNA–Protein interactions for RNA: ENST00000513287.5

CLDND1-226, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDND1, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-226ENST00000513287 NISCHQ9Y2I1 1504 aa63.32■■■■■ 7.73
CLDND1-226ENST00000513287 CCDC180Q9P1Z9 1646 aa56.85■■■■■ 6.69
CLDND1-226ENST00000513287 ABCC9O60706 1549 aa56.57■■■■■ 6.65
CLDND1-226ENST00000513287 RB1CC1Q8TDY2 1594 aa54.04■■■■■ 6.24
CLDND1-226ENST00000513287 NACADO15069 1562 aa53.74■■■■■ 6.19
CLDND1-226ENST00000513287 DCAF8L2P0C7V8 631 aa53.18■■■■■ 6.1
CLDND1-226ENST00000513287 MYO15BQ96JP2 1530 aa53.17■■■■■ 6.1
CLDND1-226ENST00000513287 DNAJC5BQ9UF47 199 aa53.06■■■■■ 6.08
CLDND1-226ENST00000513287 UNC13AQ9UPW8 1703 aa52.74■■■■■ 6.03
CLDND1-226ENST00000513287 PABPN1Q86U42 306 aaKnown RBP eCLIP52.64■■■■■ 6.02
CLDND1-226ENST00000513287 ZCCHC6Q5VYS8 1495 aaKnown RBP52.48■■■■■ 5.99
CLDND1-226ENST00000513287 DCAF1Q9Y4B6 1507 aa52.45■■■■■ 5.99
CLDND1-226ENST00000513287 BICRAQ9NZM4 1560 aa52.43■■■■■ 5.98
CLDND1-226ENST00000513287 SHROOM4Q9ULL8 1493 aa51.94■■■■■ 5.91
CLDND1-226ENST00000513287 SCRIBQ14160 1630 aa51.56■■■■■ 5.85
CLDND1-226ENST00000513287 CC2D2AQ9P2K1 1620 aa51.2■■■■■ 5.79
CLDND1-226ENST00000513287 EIF4G1Q04637 1599 aaKnown RBP51.13■■■■■ 5.78
CLDND1-226ENST00000513287 CECR2Q9BXF3 1484 aa51.04■■■■■ 5.76
CLDND1-226ENST00000513287 NCAPD3P42695 1498 aa49.63■■■■■ 5.54
CLDND1-226ENST00000513287 ATAD2BQ9ULI0 1458 aa49.4■■■■■ 5.5
CLDND1-226ENST00000513287 SMARCA4P51532 1647 aa49.34■■■■■ 5.49
CLDND1-226ENST00000513287 SMARCA2P51531 1590 aa49.31■■■■■ 5.48
CLDND1-226ENST00000513287 HMGXB3Q12766 1538 aa49.24■■■■■ 5.47
CLDND1-226ENST00000513287 BAZ1AQ9NRL2 1556 aaPredicted RBP49.15■■■■■ 5.46
CLDND1-226ENST00000513287 PEG3Q9GZU2 1588 aa48.99■■■■■ 5.43
CLDND1-226ENST00000513287 CUX2O14529 1486 aa48.93■■■■■ 5.42
CLDND1-226ENST00000513287 BAZ1BQ9UIG0 1483 aaKnown RBP48.88■■■■■ 5.42
CLDND1-226ENST00000513287 ERCC6Q03468 1493 aa48.87■■■■■ 5.41
CLDND1-226ENST00000513287 DNAJC5Q9H3Z4 198 aa48.82■■■■■ 5.41
CLDND1-226ENST00000513287 MROH2BQ7Z745 1585 aa48.7■■■■■ 5.39
CLDND1-226ENST00000513287 NESP48681 1621 aa48.61■■■■■ 5.37
CLDND1-226ENST00000513287 LAMC3Q9Y6N6 1575 aa48.47■■■■■ 5.35
CLDND1-226ENST00000513287 THOC2Q8NI27 1593 aaKnown RBP48.2■■■■■ 5.31
CLDND1-226ENST00000513287 PDS5BQ9NTI5 1447 aa48.18■■■■■ 5.3
CLDND1-226ENST00000513287 WIZO95785 1651 aa48.08■■■■■ 5.29
CLDND1-226ENST00000513287 CADPSQ9ULU8 1353 aa48.08■■■■■ 5.29
CLDND1-226ENST00000513287 KIF21AQ7Z4S6 1674 aa48.02■■■■■ 5.28
CLDND1-226ENST00000513287 RSF1Q96T23 1441 aaPredicted RBP47.76■■■■■ 5.24
CLDND1-226ENST00000513287 MRC2Q9UBG0 1479 aa47.7■■■■■ 5.23
CLDND1-226ENST00000513287 WDR62O43379 1518 aa47.61■■■■■ 5.21
CLDND1-226ENST00000513287 TOP2AP11388 1531 aaKnown RBP47.57■■■■■ 5.21
CLDND1-226ENST00000513287 CFTRP13569 1480 aa47.55■■■■■ 5.2
CLDND1-226ENST00000513287 CEP164Q9UPV0 1460 aa47.51■■■■■ 5.2
CLDND1-226ENST00000513287 FANCD2Q9BXW9 1451 aa47.46■■■■■ 5.19
CLDND1-226ENST00000513287 PRDM2Q13029 1718 aa47.05■■■■■ 5.12
CLDND1-226ENST00000513287 URB2Q14146 1524 aaKnown RBP47.05■■■■■ 5.12
CLDND1-226ENST00000513287 CCDC88BA6NC98 1476 aa47.01■■■■■ 5.12
CLDND1-226ENST00000513287 OSCARQ8IYS5 282 aa46.68■■■■■ 5.06
CLDND1-226ENST00000513287 ABCC8Q09428 1581 aa46.63■■■■■ 5.06
CLDND1-226ENST00000513287 IFT140Q96RY7 1462 aa46.61■■■■■ 5.05
CLDND1-226ENST00000513287 TOPBP1Q92547 1522 aa46.58■■■■■ 5.05
CLDND1-226ENST00000513287 TRIM41Q8WV44 630 aa46.45■■■■■ 5.03
CLDND1-226ENST00000513287 DNMBPQ6XZF7 1577 aa46.43■■■■■ 5.02
CLDND1-226ENST00000513287 ZNF608Q9ULD9 1512 aaPredicted RBP46.41■■■■■ 5.02
CLDND1-226ENST00000513287 EIF4G3O43432 1585 aaKnown RBP46.18■■■■■ 4.98
CLDND1-226ENST00000513287 TARBP1Q13395 1621 aaKnown RBP46.17■■■■■ 4.98
CLDND1-226ENST00000513287 POLA1P09884 1462 aaPredicted RBP46.1■■■■■ 4.97
CLDND1-226ENST00000513287 AQRO60306 1485 aaKnown RBP eCLIP46.01■■■■■ 4.961e-6■■■■□ 26.1
CLDND1-226ENST00000513287 RIMBP3CA6NJZ7 1639 aa45.96■■■■■ 4.95
CLDND1-226ENST00000513287 RIMBP3BA6NNM3 1639 aa45.96■■■■■ 4.95
CLDND1-226ENST00000513287 RIMBP3Q9UFD9 1639 aa45.96■■■■■ 4.95
CLDND1-226ENST00000513287 SOGA1O94964 1423 aa45.9■■■■■ 4.94
CLDND1-226ENST00000513287 WDR97A6NE52 1622 aa45.86■■■■■ 4.93
CLDND1-226ENST00000513287 ARHGEF11O15085 1522 aa45.85■■■■■ 4.93
CLDND1-226ENST00000513287 RAD54L2Q9Y4B4 1467 aa45.85■■■■■ 4.93
CLDND1-226ENST00000513287 CHD1O14646 1710 aa45.8■■■■■ 4.92
CLDND1-226ENST00000513287 FGD5Q6ZNL6 1462 aa45.78■■■■■ 4.92
CLDND1-226ENST00000513287 CUX1P39880 1505 aa45.76■■■■■ 4.92
CLDND1-226ENST00000513287 TDRD9Q8NDG6 1382 aaKnown RBP45.73■■■■■ 4.91
CLDND1-226ENST00000513287 FBLN2P98095 1184 aa45.62■■■■■ 4.89
CLDND1-226ENST00000513287 MAGI1Q96QZ7 1491 aaPredicted RBP45.55■■■■■ 4.88
CLDND1-226ENST00000513287 SNAPC4Q5SXM2 1469 aa45.54■■■■■ 4.88
CLDND1-226ENST00000513287 GRIN2BQ13224 1484 aa45.52■■■■■ 4.88
CLDND1-226ENST00000513287 SUPT5HO00267 1087 aaKnown RBP45.5■■■■■ 4.87
CLDND1-226ENST00000513287 CYB5RLQ6IPT4 315 aa45.46■■■■■ 4.87
CLDND1-226ENST00000513287 CHMP7Q8WUX9 453 aaPredicted RBP45.42■■■■■ 4.86
CLDND1-226ENST00000513287 ARAP1Q96P48 1450 aa45.38■■■■■ 4.86
CLDND1-226ENST00000513287 CLASP1Q7Z460 1538 aa45.37■■■■■ 4.85
CLDND1-226ENST00000513287 SYNJ2O15056 1496 aa45.37■■■■■ 4.85
CLDND1-226ENST00000513287 ABCA10Q8WWZ4 1543 aa45.36■■■■■ 4.85
CLDND1-226ENST00000513287 SYNJ1O43426 1573 aa45.35■■■■■ 4.85
CLDND1-226ENST00000513287 GAPVD1Q14C86 1478 aa45.35■■■■■ 4.85
CLDND1-226ENST00000513287 PBRM1Q86U86 1689 aa45.27■■■■■ 4.84
CLDND1-226ENST00000513287 ABCA5Q8WWZ7 1642 aa45.24■■■■■ 4.83
CLDND1-226ENST00000513287 WRNQ14191 1432 aaPredicted RBP eCLIP45.18■■■■■ 4.82
CLDND1-226ENST00000513287 TOP2BQ02880 1626 aa45.11■■■■■ 4.81
CLDND1-226ENST00000513287 BIVM-ERCC5R4GMW8 1640 aa45.11■■■■■ 4.81
CLDND1-226ENST00000513287 GRIN2AQ12879 1464 aa44.91■■■■■ 4.78
CLDND1-226ENST00000513287 TRHP20396 242 aaPredicted RBP44.88■■■■■ 4.78
CLDND1-226ENST00000513287 ADAMTS12P58397 1594 aa44.86■■■■■ 4.77
CLDND1-226ENST00000513287 ERICH3Q5RHP9 1530 aa44.82■■■■■ 4.77
CLDND1-226ENST00000513287 FHAD1B1AJZ9 1412 aa44.81■■■■■ 4.76
CLDND1-226ENST00000513287 NUP160Q12769 1436 aa44.81■■■■■ 4.76
CLDND1-226ENST00000513287 CEP170Q5SW79 1584 aa44.7■■■■■ 4.75
CLDND1-226ENST00000513287 SHROOM2Q13796 1616 aa44.61■■■■■ 4.73
CLDND1-226ENST00000513287 ERCC6L2Q5T890 1561 aa44.54■■■■■ 4.72
CLDND1-226ENST00000513287 JPH4Q96JJ6 628 aa44.34■■■■■ 4.69
CLDND1-226ENST00000513287 PRG4Q92954 1404 aaPredicted RBP44.29■■■■■ 4.68
CLDND1-226ENST00000513287 RUSC2Q8N2Y8 1516 aa44.23■■■■■ 4.67
CLDND1-226ENST00000513287 KIF27Q86VH2 1401 aa44.23■■■■■ 4.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms