RNA–Protein interactions for RNA: ENST00000306318.4

GBX2-201, Transcript of gastrulation brain homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GBX2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBX2-201ENST00000306318 NISCHQ9Y2I1 1504 aa46.71■■■■■ 5.07
GBX2-201ENST00000306318 SHROOM4Q9ULL8 1493 aa39.96■■■■□ 3.99
GBX2-201ENST00000306318 ZCCHC6Q5VYS8 1495 aaKnown RBP39.63■■■■□ 3.94
GBX2-201ENST00000306318 CCDC180Q9P1Z9 1646 aa39.54■■■■□ 3.92
GBX2-201ENST00000306318 SUPT5HO00267 1087 aaKnown RBP39.43■■■■□ 3.9
GBX2-201ENST00000306318 CHIC1Q5VXU3 224 aa38.71■■■■□ 3.79
GBX2-201ENST00000306318 MYO15BQ96JP2 1530 aa38.68■■■■□ 3.78
GBX2-201ENST00000306318 DCAF1Q9Y4B6 1507 aa38.42■■■■□ 3.74
GBX2-201ENST00000306318 HRCP23327 699 aa38.38■■■■□ 3.73
GBX2-201ENST00000306318 DCAF8L2P0C7V8 631 aa38.32■■■■□ 3.72
GBX2-201ENST00000306318 PCGF6Q9BYE7 350 aa37.91■■■■□ 3.66
GBX2-201ENST00000306318 ABCC9O60706 1549 aa37.49■■■■□ 3.59
GBX2-201ENST00000306318 LOC105371045A0A1W2PR82 267 aa37.48■■■■□ 3.59
GBX2-201ENST00000306318 PPARGC1BQ86YN6 1023 aaKnown RBP37.35■■■■□ 3.57
GBX2-201ENST00000306318 TRIM26Q12899 539 aaPredicted RBP37.19■■■■□ 3.54
GBX2-201ENST00000306318 RSF1Q96T23 1441 aaPredicted RBP37.13■■■■□ 3.53
GBX2-201ENST00000306318 SCRIBQ14160 1630 aa37.01■■■■□ 3.51
GBX2-201ENST00000306318 RB1CC1Q8TDY2 1594 aa36.84■■■■□ 3.49
GBX2-201ENST00000306318 TRIM41Q8WV44 630 aa36.77■■■■□ 3.48
GBX2-201ENST00000306318 ZEB1P37275 1124 aaPredicted RBP36.65■■■■□ 3.46
GBX2-201ENST00000306318 NACADO15069 1562 aa36.62■■■■□ 3.45
GBX2-201ENST00000306318 FAM9AQ8IZU1 332 aaPredicted RBP36.37■■■■□ 3.41
GBX2-201ENST00000306318 CECR2Q9BXF3 1484 aa36.34■■■■□ 3.41
GBX2-201ENST00000306318 MROH2BQ7Z745 1585 aa36.3■■■■□ 3.4
GBX2-201ENST00000306318 WIZO95785 1651 aa36.11■■■■□ 3.37
GBX2-201ENST00000306318 BAZ1AQ9NRL2 1556 aaPredicted RBP36.01■■■■□ 3.36
GBX2-201ENST00000306318 EIF4G1Q04637 1599 aaKnown RBP35.96■■■■□ 3.35
GBX2-201ENST00000306318 EHMT2Q96KQ7 1210 aa35.95■■■■□ 3.35
GBX2-201ENST00000306318 TOP2AP11388 1531 aaKnown RBP35.62■■■■□ 3.29
GBX2-201ENST00000306318 SCAF1Q9H7N4 1312 aaKnown RBP35.61■■■■□ 3.29
GBX2-201ENST00000306318 PELP1Q8IZL8 1130 aaKnown RBP35.59■■■■□ 3.29
GBX2-201ENST00000306318 UNC13AQ9UPW8 1703 aa35.55■■■■□ 3.28
GBX2-201ENST00000306318 WRNQ14191 1432 aaPredicted RBP eCLIP35.54■■■■□ 3.28
GBX2-201ENST00000306318 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.5■■■■□ 3.27
GBX2-201ENST00000306318 SMARCA4P51532 1647 aa35.47■■■■□ 3.27
GBX2-201ENST00000306318 CCER1Q8TC90 406 aaPredicted RBP35.47■■■■□ 3.27
GBX2-201ENST00000306318 ABCC8Q09428 1581 aa35.45■■■■□ 3.27
GBX2-201ENST00000306318 CCDC88BA6NC98 1476 aa35.45■■■■□ 3.27
GBX2-201ENST00000306318 SMARCA2P51531 1590 aa35.43■■■■□ 3.26
GBX2-201ENST00000306318 CEP162Q5TB80 1403 aa35.34■■■■□ 3.25
GBX2-201ENST00000306318 TNIKQ9UKE5 1360 aa35.3■■■■□ 3.24
GBX2-201ENST00000306318 EEA1Q15075 1411 aa35.27■■■■□ 3.24
GBX2-201ENST00000306318 SOGA1O94964 1423 aa35.23■■■■□ 3.23
GBX2-201ENST00000306318 ACIN1Q9UKV3 1341 aaKnown RBP35.16■■■■□ 3.22
GBX2-201ENST00000306318 BICRAQ9NZM4 1560 aa35.15■■■■□ 3.22
GBX2-201ENST00000306318 PABPN1Q86U42 306 aaKnown RBP eCLIP35.14■■■■□ 3.22
GBX2-201ENST00000306318 CSRNP3Q8WYN3 585 aa35.09■■■■□ 3.21
GBX2-201ENST00000306318 DIEXFQ68CQ4 756 aaKnown RBP35.08■■■■□ 3.21
GBX2-201ENST00000306318 RUSC2Q8N2Y8 1516 aa35.01■■■■□ 3.2
GBX2-201ENST00000306318 NEUROD1Q13562 356 aa35.01■■■■□ 3.2
GBX2-201ENST00000306318 GOLGA3Q08378 1498 aa34.99■■■■□ 3.19
GBX2-201ENST00000306318 TTBK1Q5TCY1 1321 aaPredicted RBP34.96■■■■□ 3.19
GBX2-201ENST00000306318 UBTFP17480 764 aaKnown RBP34.92■■■■□ 3.18
GBX2-201ENST00000306318 CENPBP07199 599 aaPredicted RBP34.88■■■■□ 3.17
GBX2-201ENST00000306318 PEG3Q9GZU2 1588 aa34.84■■■■□ 3.17
GBX2-201ENST00000306318 CEP164Q9UPV0 1460 aa34.75■■■■□ 3.15
GBX2-201ENST00000306318 KIF21BO75037 1637 aa34.75■■■■□ 3.15
GBX2-201ENST00000306318 ZNF316A6NFI3 1004 aaPredicted RBP34.73■■■■□ 3.15
GBX2-201ENST00000306318 GTF3C3Q9Y5Q9 886 aa34.7■■■■□ 3.15
GBX2-201ENST00000306318 SYNJ1O43426 1573 aa34.67■■■■□ 3.14
GBX2-201ENST00000306318 CLIP1P30622 1438 aa34.58■■■■□ 3.13
GBX2-201ENST00000306318 BAZ1BQ9UIG0 1483 aaKnown RBP34.55■■■■□ 3.12
GBX2-201ENST00000306318 VPS8Q8N3P4 1428 aa34.53■■■■□ 3.12
GBX2-201ENST00000306318 ATAD2BQ9ULI0 1458 aa34.43■■■■□ 3.1
GBX2-201ENST00000306318 HNRNPUL2Q1KMD3 747 aaKnown RBP34.42■■■■□ 3.1
GBX2-201ENST00000306318 RAPGEF2Q9Y4G8 1499 aa34.37■■■■□ 3.09
GBX2-201ENST00000306318 APLP2Q06481 763 aa34.28■■■■□ 3.08
GBX2-201ENST00000306318 TOP2BQ02880 1626 aa34.24■■■■□ 3.07
GBX2-201ENST00000306318 MIER1Q8N108 512 aa34.24■■■■□ 3.07
GBX2-201ENST00000306318 YTHDC1Q96MU7 727 aaKnown RBP34.15■■■■□ 3.06
GBX2-201ENST00000306318 BIVM-ERCC5R4GMW8 1640 aa34.13■■■■□ 3.05
GBX2-201ENST00000306318 ERICH3Q5RHP9 1530 aa34.12■■■■□ 3.05
GBX2-201ENST00000306318 CLSPNQ9HAW4 1339 aa34.1■■■■□ 3.05
GBX2-201ENST00000306318 PRXQ9BXM0 1461 aa34.05■■■■□ 3.04
GBX2-201ENST00000306318 ARAP1Q96P48 1450 aa33.99■■■■□ 3.03
GBX2-201ENST00000306318 DHX57Q6P158 1386 aaKnown RBP33.96■■■■□ 3.03
GBX2-201ENST00000306318 RANGAP1P46060 587 aaPredicted RBP33.95■■■■□ 3.03
GBX2-201ENST00000306318 MYT1Q01538 1121 aa33.95■■■■□ 3.03
GBX2-201ENST00000306318 NCAPD3P42695 1498 aa33.84■■■■□ 3.01
GBX2-201ENST00000306318 RRBP1Q9P2E9 1410 aaKnown RBP33.83■■■■□ 3.01
GBX2-201ENST00000306318 KANK4Q5T7N3 995 aaPredicted RBP33.8■■■■□ 3
GBX2-201ENST00000306318 HMGXB3Q12766 1538 aa33.8■■■■□ 3
GBX2-201ENST00000306318 CUX1P39880 1505 aa33.77■■■■□ 3
GBX2-201ENST00000306318 CUX2O14529 1486 aa33.76■■■■□ 3
GBX2-201ENST00000306318 KIF27Q86VH2 1401 aa33.74■■■□□ 2.99
GBX2-201ENST00000306318 ARHGAP35Q9NRY4 1499 aa33.61■■■□□ 2.97
GBX2-201ENST00000306318 CCNB3Q8WWL7 1395 aa33.6■■■□□ 2.97
GBX2-201ENST00000306318 CFTRP13569 1480 aa33.57■■■□□ 2.96
GBX2-201ENST00000306318 MAP3K1Q13233 1512 aa33.43■■■□□ 2.94
GBX2-201ENST00000306318 CC2D2AQ9P2K1 1620 aa33.43■■■□□ 2.94
GBX2-201ENST00000306318 SUPT16HQ9Y5B9 1047 aaKnown RBP33.37■■■□□ 2.93
GBX2-201ENST00000306318 TIAM1Q13009 1591 aa33.35■■■□□ 2.93
GBX2-201ENST00000306318 RAB3GAP2Q9H2M9 1393 aa33.34■■■□□ 2.93
GBX2-201ENST00000306318 MAPKBP1O60336 1514 aa33.34■■■□□ 2.93
GBX2-201ENST00000306318 PRDM2Q13029 1718 aa33.33■■■□□ 2.93
GBX2-201ENST00000306318 IGF1RP08069 1367 aa33.33■■■□□ 2.93
GBX2-201ENST00000306318 ITGAEP38570 1179 aa33.26■■■□□ 2.91
GBX2-201ENST00000306318 SETD5Q9C0A6 1442 aa33.23■■■□□ 2.91
GBX2-201ENST00000306318 LRRC9Q6ZRR7 1453 aa33.22■■■□□ 2.91
GBX2-201ENST00000306318 CARMIL1Q5VZK9 1371 aa33.18■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms