Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 ZNF330-207ENST00000514826 733 ntTSL 212.87□□□□□ -0.351e-8■■■□□ 17.4
MATR3P43243 TANK-215ENST00000457887 762 ntTSL 512.33□□□□□ -0.443e-9■■■□□ 17.4
MATR3P43243 ZNF330-201ENST00000262990 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.441e-8■■■□□ 17.4
MATR3P43243 ZNF330-204ENST00000507532 836 ntTSL 311.61□□□□□ -0.551e-8■■■□□ 17.4
MATR3P43243 SREBF2-208ENST00000491541 4043 ntTSL 1 (best)11.35□□□□□ -0.592e-8■■■□□ 17.4
MATR3P43243 ZNF330-205ENST00000512738 552 ntTSL 411.13□□□□□ -0.631e-8■■■□□ 17.4
MATR3P43243 PAWR-207ENST00000549050 547 ntTSL 510.93□□□□□ -0.661e-8■■■□□ 17.4
MATR3P43243 ZNF330-206ENST00000512809 838 ntTSL 310.76□□□□□ -0.691e-8■■■□□ 17.4
MATR3P43243 TANK-207ENST00000429217 762 ntTSL 59.8□□□□□ -0.843e-9■■■□□ 17.4
MATR3P43243 PLD1-213ENST00000481505 491 ntTSL 48.58□□□□□ -1.041e-8■■■□□ 17.4
MATR3P43243 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC8.48□□□□□ -1.053e-7■■■□□ 17.4
MATR3P43243 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.181e-8■■■□□ 17.4
MATR3P43243 LSM1-202ENST00000520286 776 ntTSL 1 (best)7.44□□□□□ -1.224e-6■■■□□ 17.4
MATR3P43243 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.71□□□□□ -1.53e-9■■■□□ 17.4
MATR3P43243 ZNF330-202ENST00000503649 573 ntTSL 55.34□□□□□ -1.551e-8■■■□□ 17.4
MATR3P43243 LINC01909-201ENST00000583247 423 ntTSL 35.19□□□□□ -1.581e-8■■■□□ 17.4
MATR3P43243 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.17□□□□□ -1.583e-9■■■□□ 17.4
MATR3P43243 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.591e-8■■■□□ 17.4
MATR3P43243 TANK-209ENST00000432692 576 ntTSL 54.06□□□□□ -1.763e-9■■■□□ 17.4
MATR3P43243 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.04□□□□□ -1.763e-9■■■□□ 17.4
MATR3P43243 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.67□□□□□ -1.821e-8■■■□□ 17.4
MATR3P43243 TANK-208ENST00000432002 600 ntTSL 53.55□□□□□ -1.843e-9■■■□□ 17.4
MATR3P43243 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.973e-9■■■□□ 17.4
MATR3P43243 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.999e-7■■■□□ 17.4
MATR3P43243 FOXN3-204ENST00000553840 555 ntTSL 419.4■□□□□ 0.79e-7■■■□□ 17.4
MATR3P43243 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.179e-7■■■□□ 17.4
MATR3P43243 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.189e-7■■■□□ 17.4
MATR3P43243 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.21■□□□□ 0.351e-6■■■□□ 17.4
MATR3P43243 GREB1-203ENST00000381483 2347 ntTSL 1 (best) BASIC11.24□□□□□ -0.611e-6■■■□□ 17.4
MATR3P43243 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.522e-6■■■□□ 17.4
MATR3P43243 GNAQ-202ENST00000411677 551 ntTSL 310.65□□□□□ -0.72e-6■■■□□ 17.4
MATR3P43243 CDC42SE2-207ENST00000504701 567 ntTSL 424.75■■□□□ 1.557e-6■■■□□ 17.4
MATR3P43243 CDC42SE2-209ENST00000506419 458 ntTSL 315.7■□□□□ 0.17e-6■■■□□ 17.4
MATR3P43243 CDC42SE2-211ENST00000511432 286 ntTSL 53.51□□□□□ -1.857e-6■■■□□ 17.4
MATR3P43243 CDC42SE2-205ENST00000502840 539 ntTSL 43.37□□□□□ -1.877e-6■■■□□ 17.4
MATR3P43243 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.45□□□□□ -1.549e-7■■■□□ 17.4
MATR3P43243 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.34□□□□□ -1.559e-7■■■□□ 17.4
MATR3P43243 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.319e-7■■■□□ 17.4
MATR3P43243 FAM13A-203ENST00000502459 1993 ntTSL 219.21■□□□□ 0.672e-7■■■□□ 17.4
MATR3P43243 FAM13A-220ENST00000513837 2590 ntTSL 2 BASIC11.15□□□□□ -0.632e-7■■■□□ 17.4
MATR3P43243 FAM13A-212ENST00000508369 3169 ntTSL 5 BASIC10.68□□□□□ -0.72e-7■■■□□ 17.4
MATR3P43243 FAM13A-210ENST00000507352 1306 ntTSL 1 (best)10.67□□□□□ -0.72e-7■■■□□ 17.4
MATR3P43243 FAM13A-207ENST00000504836 2287 ntTSL 210.44□□□□□ -0.742e-7■■■□□ 17.4
MATR3P43243 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC10.09□□□□□ -0.792e-7■■■□□ 17.4
MATR3P43243 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.872e-7■■■□□ 17.4
MATR3P43243 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC9.18□□□□□ -0.942e-7■■■□□ 17.4
MATR3P43243 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC8.78□□□□□ -12e-7■■■□□ 17.4
MATR3P43243 NDEL1-204ENST00000578172 3927 nt15.53■□□□□ 0.089e-7■■■□□ 17.4
MATR3P43243 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.062e-6■■■□□ 17.4
MATR3P43243 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.23■□□□□ 0.834e-7■■■□□ 17.4
MATR3P43243 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.08■□□□□ 0.324e-7■■■□□ 17.4
MATR3P43243 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.144e-7■■■□□ 17.4
MATR3P43243 SND1-209ENST00000470723 568 ntTSL 413.74□□□□□ -0.211e-6■■■□□ 17.4
MATR3P43243 SND1-211ENST00000484767 460 ntTSL 410.08□□□□□ -0.81e-6■■■□□ 17.4
MATR3P43243 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.35□□□□□ -1.718e-7■■■□□ 17.4
MATR3P43243 FNIP2-201ENST00000264433 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.343e-14■■■□□ 17.4
MATR3P43243 FNIP2-206ENST00000512986 2173 ntTSL 1 (best)11.56□□□□□ -0.563e-14■■■□□ 17.4
MATR3P43243 SMYD5-204ENST00000443900 584 ntTSL 422.28■■□□□ 1.168e-14■■■□□ 17.4
MATR3P43243 SMYD5-201ENST00000258100 786 ntTSL 518.38■□□□□ 0.538e-14■■■□□ 17.4
MATR3P43243 SMYD5-205ENST00000474652 753 ntTSL 518.2■□□□□ 0.58e-14■■■□□ 17.4
MATR3P43243 SMYD5-203ENST00000413491 660 ntTSL 416.58■□□□□ 0.248e-14■■■□□ 17.4
MATR3P43243 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.148e-14■■■□□ 17.4
MATR3P43243 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC14.62□□□□□ -0.078e-14■■■□□ 17.4
MATR3P43243 EPB41-212ENST00000490308 354 ntTSL 32.9□□□□□ -1.952e-7■■■□□ 17.4
MATR3P43243 EPB41-211ENST00000488277 262 ntTSL 32.3□□□□□ -2.042e-7■■■□□ 17.4
MATR3P43243 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.198e-7■■■□□ 17.4
MATR3P43243 FOXN3-202ENST00000345097 7832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.738e-7■■■□□ 17.4
MATR3P43243 ZNF235-205ENST00000591609 946 ntTSL 419.98■□□□□ 0.792e-6■■■□□ 17.4
MATR3P43243 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC14.15□□□□□ -0.142e-6■■■□□ 17.4
MATR3P43243 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -12e-6■■■□□ 17.4
MATR3P43243 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.79□□□□□ -1.322e-6■■■□□ 17.4
MATR3P43243 ZNF235-206ENST00000592844 616 ntTSL 25.49□□□□□ -1.532e-6■■■□□ 17.4
MATR3P43243 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.45□□□□□ -2.023e-9■■■□□ 17.3
MATR3P43243 NUDCD3-202ENST00000355451 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.175e-6■■■□□ 17.3
MATR3P43243 NUDCD3-205ENST00000472246 570 ntTSL 410.73□□□□□ -0.695e-6■■■□□ 17.3
MATR3P43243 NUDCD3-203ENST00000460110 3641 ntTSL 1 (best)10.34□□□□□ -0.755e-6■■■□□ 17.3
MATR3P43243 NUDCD3-204ENST00000464812 811 ntTSL 59.77□□□□□ -0.855e-6■■■□□ 17.3
MATR3P43243 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.671e-6■■■□□ 17.3
MATR3P43243 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.22■□□□□ 0.671e-6■■■□□ 17.3
MATR3P43243 SMAD3-213ENST00000560175 542 ntTSL 414.37□□□□□ -0.111e-6■■■□□ 17.3
MATR3P43243 SMAD3-211ENST00000559460 568 ntTSL 410.47□□□□□ -0.731e-6■■■□□ 17.3
MATR3P43243 SMAD3-212ENST00000559937 579 ntTSL 48.75□□□□□ -1.011e-6■■■□□ 17.3
MATR3P43243 SPOPL-203ENST00000430968 558 ntTSL 526.76■■□□□ 1.872e-6■■■□□ 17.3
MATR3P43243 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.022e-6■■■□□ 17.3
MATR3P43243 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.871e-6■■■□□ 17.3
MATR3P43243 SOX5-212ENST00000541536 2365 ntTSL 2 BASIC10.66□□□□□ -0.78e-7■■■□□ 17.3
MATR3P43243 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.338e-7■■■□□ 17.3
MATR3P43243 CWC22-202ENST00000410053 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.212e-6■■■□□ 17.3
MATR3P43243 CWC22-201ENST00000404136 2392 ntTSL 1 (best)4.52□□□□□ -1.692e-6■■■□□ 17.3
MATR3P43243 ANKRD11-211ENST00000566973 442 ntTSL 222.17■■□□□ 1.149e-7■■■□□ 17.3
MATR3P43243 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.578e-7■■■□□ 17.3
MATR3P43243 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -08e-7■■■□□ 17.3
MATR3P43243 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC10.65□□□□□ -0.75e-7■■■□□ 17.3
MATR3P43243 GMDS-AS1-210ENST00000532564 1436 ntTSL 39.26□□□□□ -0.935e-7■■■□□ 17.3
MATR3P43243 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.241e-6■■■□□ 17.3
MATR3P43243 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC8.24□□□□□ -1.091e-6■■■□□ 17.3
MATR3P43243 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.32□□□□□ -1.241e-6■■■□□ 17.3
MATR3P43243 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC7.02□□□□□ -1.291e-6■■■□□ 17.3
MATR3P43243 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.92□□□□□ -1.621e-6■■■□□ 17.3
MATR3P43243 RASGRF2-201ENST00000265080 8167 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.287e-7■■■□□ 17.3
Retrieved 100 of 16,209 protein–RNA pairs in 121.7 ms