RNA–Protein interactions for RNA: ENST00000291182.8

ZNF235-201, Transcript of zinc finger protein 235, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF235, Length 3,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF235-201ENST00000291182 NISCHQ9Y2I1 1504 aa15.66■□□□□ 0.1
ZNF235-201ENST00000291182 SHROOM4Q9ULL8 1493 aa13.77□□□□□ -0.21
ZNF235-201ENST00000291182 SUPT5HO00267 1087 aaKnown RBP13.61□□□□□ -0.23
ZNF235-201ENST00000291182 DCAF8L2P0C7V8 631 aa13.44□□□□□ -0.26
ZNF235-201ENST00000291182 ZCCHC6Q5VYS8 1495 aaKnown RBP13.23□□□□□ -0.29
ZNF235-201ENST00000291182 CCDC180Q9P1Z9 1646 aa13.12□□□□□ -0.31
ZNF235-201ENST00000291182 CHIC1Q5VXU3 224 aa13.11□□□□□ -0.31
ZNF235-201ENST00000291182 MYO15BQ96JP2 1530 aa12.98□□□□□ -0.33
ZNF235-201ENST00000291182 PCGF6Q9BYE7 350 aa12.98□□□□□ -0.33
ZNF235-201ENST00000291182 HRCP23327 699 aa12.93□□□□□ -0.34
ZNF235-201ENST00000291182 LOC105371045A0A1W2PR82 267 aa12.83□□□□□ -0.36
ZNF235-201ENST00000291182 PPARGC1BQ86YN6 1023 aaKnown RBP12.73□□□□□ -0.37
ZNF235-201ENST00000291182 DCAF1Q9Y4B6 1507 aa12.71□□□□□ -0.37
ZNF235-201ENST00000291182 FAM9AQ8IZU1 332 aaPredicted RBP12.62□□□□□ -0.39
ZNF235-201ENST00000291182 EHMT2Q96KQ7 1210 aa12.62□□□□□ -0.39
ZNF235-201ENST00000291182 TRIM41Q8WV44 630 aa12.61□□□□□ -0.39
ZNF235-201ENST00000291182 TRIM26Q12899 539 aaPredicted RBP12.61□□□□□ -0.39
ZNF235-201ENST00000291182 SCRIBQ14160 1630 aa12.54□□□□□ -0.4
ZNF235-201ENST00000291182 RSF1Q96T23 1441 aaPredicted RBP12.49□□□□□ -0.41
ZNF235-201ENST00000291182 ABCC9O60706 1549 aa12.49□□□□□ -0.41
ZNF235-201ENST00000291182 ZEB1P37275 1124 aaPredicted RBP12.39□□□□□ -0.43
ZNF235-201ENST00000291182 RB1CC1Q8TDY2 1594 aa12.36□□□□□ -0.43
ZNF235-201ENST00000291182 CECR2Q9BXF3 1484 aa12.28□□□□□ -0.44
ZNF235-201ENST00000291182 TTBK1Q5TCY1 1321 aaPredicted RBP12.23□□□□□ -0.45
ZNF235-201ENST00000291182 MROH2BQ7Z745 1585 aa12.22□□□□□ -0.45
ZNF235-201ENST00000291182 NACADO15069 1562 aa12.2□□□□□ -0.46
ZNF235-201ENST00000291182 CCER1Q8TC90 406 aaPredicted RBP12.18□□□□□ -0.46
ZNF235-201ENST00000291182 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.16□□□□□ -0.46
ZNF235-201ENST00000291182 WIZO95785 1651 aa12.14□□□□□ -0.47
ZNF235-201ENST00000291182 SLC24A1O60721 1099 aa12.09□□□□□ -0.47
ZNF235-201ENST00000291182 UBTFP17480 764 aaKnown RBP12.06□□□□□ -0.48
ZNF235-201ENST00000291182 BAZ1AQ9NRL2 1556 aaPredicted RBP12.03□□□□□ -0.48
ZNF235-201ENST00000291182 MYT1Q01538 1121 aa12.03□□□□□ -0.48
ZNF235-201ENST00000291182 PELP1Q8IZL8 1130 aaKnown RBP12□□□□□ -0.49
ZNF235-201ENST00000291182 SCAF1Q9H7N4 1312 aaKnown RBP12□□□□□ -0.49
ZNF235-201ENST00000291182 ABCC8Q09428 1581 aa11.99□□□□□ -0.49
ZNF235-201ENST00000291182 CCDC88BA6NC98 1476 aa11.97□□□□□ -0.49
ZNF235-201ENST00000291182 PABPN1Q86U42 306 aaKnown RBP eCLIP11.96□□□□□ -0.49
ZNF235-201ENST00000291182 CSRNP3Q8WYN3 585 aa11.95□□□□□ -0.5
ZNF235-201ENST00000291182 DIEXFQ68CQ4 756 aaKnown RBP11.94□□□□□ -0.5
ZNF235-201ENST00000291182 CEP162Q5TB80 1403 aa11.94□□□□□ -0.5
ZNF235-201ENST00000291182 SOGA1O94964 1423 aa11.93□□□□□ -0.5
ZNF235-201ENST00000291182 TOP2AP11388 1531 aaKnown RBP11.92□□□□□ -0.5
ZNF235-201ENST00000291182 RANGAP1P46060 587 aaPredicted RBP11.91□□□□□ -0.5
ZNF235-201ENST00000291182 CENPBP07199 599 aaPredicted RBP11.89□□□□□ -0.51
ZNF235-201ENST00000291182 SMARCA4P51532 1647 aa11.88□□□□□ -0.51
ZNF235-201ENST00000291182 TNIKQ9UKE5 1360 aa11.87□□□□□ -0.51
ZNF235-201ENST00000291182 ACIN1Q9UKV3 1341 aaKnown RBP11.87□□□□□ -0.51
ZNF235-201ENST00000291182 APLP2Q06481 763 aa11.87□□□□□ -0.51
ZNF235-201ENST00000291182 HNRNPUL2Q1KMD3 747 aaKnown RBP11.87□□□□□ -0.51
ZNF235-201ENST00000291182 NEUROD1Q13562 356 aa11.85□□□□□ -0.51
ZNF235-201ENST00000291182 SMARCA2P51531 1590 aa11.85□□□□□ -0.51
ZNF235-201ENST00000291182 EIF4G1Q04637 1599 aaKnown RBP11.85□□□□□ -0.51
ZNF235-201ENST00000291182 RUSC2Q8N2Y8 1516 aa11.84□□□□□ -0.51
ZNF235-201ENST00000291182 WRNQ14191 1432 aaPredicted RBP eCLIP11.84□□□□□ -0.51
ZNF235-201ENST00000291182 EEA1Q15075 1411 aa11.82□□□□□ -0.52
ZNF235-201ENST00000291182 YTHDC1Q96MU7 727 aaKnown RBP11.81□□□□□ -0.52
ZNF235-201ENST00000291182 GTF3C3Q9Y5Q9 886 aa11.8□□□□□ -0.52
ZNF235-201ENST00000291182 GOLGA3Q08378 1498 aa11.8□□□□□ -0.52
ZNF235-201ENST00000291182 ZNF316A6NFI3 1004 aaPredicted RBP11.78□□□□□ -0.52
ZNF235-201ENST00000291182 CLIP1P30622 1438 aa11.72□□□□□ -0.53
ZNF235-201ENST00000291182 CEP164Q9UPV0 1460 aa11.71□□□□□ -0.54
ZNF235-201ENST00000291182 UNC13AQ9UPW8 1703 aa11.7□□□□□ -0.54
ZNF235-201ENST00000291182 BAZ1BQ9UIG0 1483 aaKnown RBP11.65□□□□□ -0.54
ZNF235-201ENST00000291182 MIER1Q8N108 512 aa11.64□□□□□ -0.55
ZNF235-201ENST00000291182 SYNJ1O43426 1573 aa11.63□□□□□ -0.55
ZNF235-201ENST00000291182 VPS8Q8N3P4 1428 aa11.62□□□□□ -0.55
ZNF235-201ENST00000291182 RAPGEF2Q9Y4G8 1499 aa11.61□□□□□ -0.55
ZNF235-201ENST00000291182 BICRAQ9NZM4 1560 aa11.61□□□□□ -0.55
ZNF235-201ENST00000291182 ATAD2BQ9ULI0 1458 aa11.6□□□□□ -0.55
ZNF235-201ENST00000291182 ITGAEP38570 1179 aa11.57□□□□□ -0.56
ZNF235-201ENST00000291182 KIF21BO75037 1637 aa11.57□□□□□ -0.56
ZNF235-201ENST00000291182 PEG3Q9GZU2 1588 aa11.53□□□□□ -0.56
ZNF235-201ENST00000291182 PRKCSHP14314 528 aaPredicted RBP11.52□□□□□ -0.57
ZNF235-201ENST00000291182 KANK4Q5T7N3 995 aaPredicted RBP11.5□□□□□ -0.57
ZNF235-201ENST00000291182 ATP1B4Q9UN42 357 aaPredicted RBP11.46□□□□□ -0.57
ZNF235-201ENST00000291182 TOP2BQ02880 1626 aa11.44□□□□□ -0.58
ZNF235-201ENST00000291182 KIF27Q86VH2 1401 aa11.44□□□□□ -0.58
ZNF235-201ENST00000291182 DHX57Q6P158 1386 aaKnown RBP11.43□□□□□ -0.58
ZNF235-201ENST00000291182 CLSPNQ9HAW4 1339 aa11.43□□□□□ -0.58
ZNF235-201ENST00000291182 PRXQ9BXM0 1461 aa11.4□□□□□ -0.58
ZNF235-201ENST00000291182 ARAP1Q96P48 1450 aa11.4□□□□□ -0.58
ZNF235-201ENST00000291182 FAM50AQ14320 339 aaKnown RBP11.38□□□□□ -0.59
ZNF235-201ENST00000291182 CCNB3Q8WWL7 1395 aa11.38□□□□□ -0.59
ZNF235-201ENST00000291182 ERICH3Q5RHP9 1530 aa11.38□□□□□ -0.59
ZNF235-201ENST00000291182 ERICH6Q7L0X2 663 aa11.37□□□□□ -0.59
ZNF235-201ENST00000291182 P3H3Q8IVL6 736 aa11.37□□□□□ -0.59
ZNF235-201ENST00000291182 DAXXQ9UER7 740 aaPredicted RBP11.35□□□□□ -0.59
ZNF235-201ENST00000291182 CUX1P39880 1505 aa11.35□□□□□ -0.59
ZNF235-201ENST00000291182 BIVM-ERCC5R4GMW8 1640 aa11.34□□□□□ -0.59
ZNF235-201ENST00000291182 CUX2O14529 1486 aa11.32□□□□□ -0.6
ZNF235-201ENST00000291182 NCAPD3P42695 1498 aa11.32□□□□□ -0.6
ZNF235-201ENST00000291182 RRBP1Q9P2E9 1410 aaKnown RBP11.31□□□□□ -0.6
ZNF235-201ENST00000291182 ARHGAP35Q9NRY4 1499 aa11.31□□□□□ -0.6
ZNF235-201ENST00000291182 RAB3GAP2Q9H2M9 1393 aa11.3□□□□□ -0.6
ZNF235-201ENST00000291182 CARMIL1Q5VZK9 1371 aa11.28□□□□□ -0.6
ZNF235-201ENST00000291182 CFTRP13569 1480 aa11.28□□□□□ -0.6
ZNF235-201ENST00000291182 SUPT16HQ9Y5B9 1047 aaKnown RBP11.28□□□□□ -0.6
ZNF235-201ENST00000291182 HMGXB3Q12766 1538 aa11.27□□□□□ -0.6
ZNF235-201ENST00000291182 DDX10Q13206 875 aaKnown RBP11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms