RNA–Protein interactions for RNA: ENST00000504836.5

FAM13A-207, Transcript of family with sequence similarity 13 member A, humanhuman

TSL 2

Gene FAM13A, Length 2,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM13A-207ENST00000504836 NISCHQ9Y2I1 1504 aa19.61■□□□□ 0.73
FAM13A-207ENST00000504836 CCDC180Q9P1Z9 1646 aa16.76■□□□□ 0.27
FAM13A-207ENST00000504836 ZCCHC6Q5VYS8 1495 aaKnown RBP16.6■□□□□ 0.25
FAM13A-207ENST00000504836 SHROOM4Q9ULL8 1493 aa16.51■□□□□ 0.23
FAM13A-207ENST00000504836 SUPT5HO00267 1087 aaKnown RBP16.26■□□□□ 0.19
FAM13A-207ENST00000504836 DCAF1Q9Y4B6 1507 aa16.22■□□□□ 0.19
FAM13A-207ENST00000504836 DCAF8L2P0C7V8 631 aa16.06■□□□□ 0.16
FAM13A-207ENST00000504836 CHIC1Q5VXU3 224 aa15.91■□□□□ 0.14
FAM13A-207ENST00000504836 MYO15BQ96JP2 1530 aa15.77■□□□□ 0.11
FAM13A-207ENST00000504836 ABCC9O60706 1549 aa15.67■□□□□ 0.1
FAM13A-207ENST00000504836 SCRIBQ14160 1630 aa15.52■□□□□ 0.08
FAM13A-207ENST00000504836 HRCP23327 699 aa15.52■□□□□ 0.07
FAM13A-207ENST00000504836 RSF1Q96T23 1441 aaPredicted RBP15.48■□□□□ 0.07
FAM13A-207ENST00000504836 NACADO15069 1562 aa15.47■□□□□ 0.07
FAM13A-207ENST00000504836 PCGF6Q9BYE7 350 aa15.41■□□□□ 0.06
FAM13A-207ENST00000504836 RB1CC1Q8TDY2 1594 aa15.4■□□□□ 0.06
FAM13A-207ENST00000504836 LOC105371045A0A1W2PR82 267 aa15.33■□□□□ 0.05
FAM13A-207ENST00000504836 TRIM41Q8WV44 630 aa15.26■□□□□ 0.03
FAM13A-207ENST00000504836 TRIM26Q12899 539 aaPredicted RBP15.24■□□□□ 0.03
FAM13A-207ENST00000504836 CECR2Q9BXF3 1484 aa15.17■□□□□ 0.02
FAM13A-207ENST00000504836 MROH2BQ7Z745 1585 aa15.17■□□□□ 0.02
FAM13A-207ENST00000504836 BAZ1AQ9NRL2 1556 aaPredicted RBP15.1■□□□□ 0.01
FAM13A-207ENST00000504836 WIZO95785 1651 aa15.09■□□□□ 0.01
FAM13A-207ENST00000504836 ZEB1P37275 1124 aaPredicted RBP15.03■□□□□ -0
FAM13A-207ENST00000504836 PPARGC1BQ86YN6 1023 aaKnown RBP14.99□□□□□ -0.01
FAM13A-207ENST00000504836 FAM9AQ8IZU1 332 aaPredicted RBP14.98□□□□□ -0.01
FAM13A-207ENST00000504836 EIF4G1Q04637 1599 aaKnown RBP14.95□□□□□ -0.02
FAM13A-207ENST00000504836 TOP2AP11388 1531 aaKnown RBP14.94□□□□□ -0.02
FAM13A-207ENST00000504836 SMARCA4P51532 1647 aa14.92□□□□□ -0.02
FAM13A-207ENST00000504836 UNC13AQ9UPW8 1703 aa14.88□□□□□ -0.03
FAM13A-207ENST00000504836 SMARCA2P51531 1590 aa14.82□□□□□ -0.04
FAM13A-207ENST00000504836 CCDC88BA6NC98 1476 aa14.82□□□□□ -0.04
FAM13A-207ENST00000504836 EEA1Q15075 1411 aa14.75□□□□□ -0.05
FAM13A-207ENST00000504836 EHMT2Q96KQ7 1210 aa14.73□□□□□ -0.05
FAM13A-207ENST00000504836 ABCC8Q09428 1581 aa14.73□□□□□ -0.05
FAM13A-207ENST00000504836 PEG3Q9GZU2 1588 aa14.71□□□□□ -0.05
FAM13A-207ENST00000504836 WRNQ14191 1432 aaPredicted RBP eCLIP14.7□□□□□ -0.06
FAM13A-207ENST00000504836 BICRAQ9NZM4 1560 aa14.68□□□□□ -0.06
FAM13A-207ENST00000504836 TNIKQ9UKE5 1360 aa14.66□□□□□ -0.06
FAM13A-207ENST00000504836 CEP162Q5TB80 1403 aa14.62□□□□□ -0.07
FAM13A-207ENST00000504836 CSRNP3Q8WYN3 585 aa14.61□□□□□ -0.07
FAM13A-207ENST00000504836 SOGA1O94964 1423 aa14.6□□□□□ -0.07
FAM13A-207ENST00000504836 GOLGA3Q08378 1498 aa14.56□□□□□ -0.08
FAM13A-207ENST00000504836 PABPN1Q86U42 306 aaKnown RBP eCLIP14.55□□□□□ -0.08
FAM13A-207ENST00000504836 CCER1Q8TC90 406 aaPredicted RBP14.53□□□□□ -0.08
FAM13A-207ENST00000504836 ATAD2BQ9ULI0 1458 aa14.51□□□□□ -0.09
FAM13A-207ENST00000504836 UBTFP17480 764 aaKnown RBP14.5□□□□□ -0.09
FAM13A-207ENST00000504836 CEP164Q9UPV0 1460 aa14.49□□□□□ -0.09
FAM13A-207ENST00000504836 BAZ1BQ9UIG0 1483 aaKnown RBP14.49□□□□□ -0.09
FAM13A-207ENST00000504836 RUSC2Q8N2Y8 1516 aa14.49□□□□□ -0.09
FAM13A-207ENST00000504836 KIF21BO75037 1637 aa14.48□□□□□ -0.09
FAM13A-207ENST00000504836 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.48□□□□□ -0.09
FAM13A-207ENST00000504836 SYNJ1O43426 1573 aa14.45□□□□□ -0.1
FAM13A-207ENST00000504836 TOP2BQ02880 1626 aa14.36□□□□□ -0.11
FAM13A-207ENST00000504836 CLIP1P30622 1438 aa14.36□□□□□ -0.11
FAM13A-207ENST00000504836 VPS8Q8N3P4 1428 aa14.33□□□□□ -0.12
FAM13A-207ENST00000504836 BIVM-ERCC5R4GMW8 1640 aa14.32□□□□□ -0.12
FAM13A-207ENST00000504836 HMGXB3Q12766 1538 aa14.31□□□□□ -0.12
FAM13A-207ENST00000504836 TTBK1Q5TCY1 1321 aaPredicted RBP14.3□□□□□ -0.12
FAM13A-207ENST00000504836 APLP2Q06481 763 aa14.29□□□□□ -0.12
FAM13A-207ENST00000504836 NCAPD3P42695 1498 aa14.28□□□□□ -0.12
FAM13A-207ENST00000504836 ERICH3Q5RHP9 1530 aa14.27□□□□□ -0.12
FAM13A-207ENST00000504836 RAPGEF2Q9Y4G8 1499 aa14.27□□□□□ -0.12
FAM13A-207ENST00000504836 DIEXFQ68CQ4 756 aaKnown RBP14.27□□□□□ -0.13
FAM13A-207ENST00000504836 PELP1Q8IZL8 1130 aaKnown RBP14.25□□□□□ -0.13
FAM13A-207ENST00000504836 SCAF1Q9H7N4 1312 aaKnown RBP14.22□□□□□ -0.13
FAM13A-207ENST00000504836 PRXQ9BXM0 1461 aa14.21□□□□□ -0.13
FAM13A-207ENST00000504836 ZNF316A6NFI3 1004 aaPredicted RBP14.19□□□□□ -0.14
FAM13A-207ENST00000504836 CENPBP07199 599 aaPredicted RBP14.19□□□□□ -0.14
FAM13A-207ENST00000504836 ACIN1Q9UKV3 1341 aaKnown RBP14.18□□□□□ -0.14
FAM13A-207ENST00000504836 KIF27Q86VH2 1401 aa14.16□□□□□ -0.14
FAM13A-207ENST00000504836 CFTRP13569 1480 aa14.16□□□□□ -0.14
FAM13A-207ENST00000504836 CUX1P39880 1505 aa14.14□□□□□ -0.15
FAM13A-207ENST00000504836 HNRNPUL2Q1KMD3 747 aaKnown RBP14.13□□□□□ -0.15
FAM13A-207ENST00000504836 CLSPNQ9HAW4 1339 aa14.13□□□□□ -0.15
FAM13A-207ENST00000504836 PRDM2Q13029 1718 aa14.11□□□□□ -0.15
FAM13A-207ENST00000504836 ARAP1Q96P48 1450 aa14.09□□□□□ -0.15
FAM13A-207ENST00000504836 NEUROD1Q13562 356 aa14.07□□□□□ -0.16
FAM13A-207ENST00000504836 RANGAP1P46060 587 aaPredicted RBP14.04□□□□□ -0.16
FAM13A-207ENST00000504836 RRBP1Q9P2E9 1410 aaKnown RBP14.02□□□□□ -0.17
FAM13A-207ENST00000504836 CADPSQ9ULU8 1353 aa13.98□□□□□ -0.17
FAM13A-207ENST00000504836 ARHGAP35Q9NRY4 1499 aa13.98□□□□□ -0.17
FAM13A-207ENST00000504836 GTF3C3Q9Y5Q9 886 aa13.97□□□□□ -0.17
FAM13A-207ENST00000504836 MAP3K1Q13233 1512 aa13.96□□□□□ -0.17
FAM13A-207ENST00000504836 CUX2O14529 1486 aa13.96□□□□□ -0.17
FAM13A-207ENST00000504836 DHX57Q6P158 1386 aaKnown RBP13.96□□□□□ -0.17
FAM13A-207ENST00000504836 KANK4Q5T7N3 995 aaPredicted RBP13.95□□□□□ -0.18
FAM13A-207ENST00000504836 IGF1RP08069 1367 aa13.94□□□□□ -0.18
FAM13A-207ENST00000504836 CCNB3Q8WWL7 1395 aa13.93□□□□□ -0.18
FAM13A-207ENST00000504836 CARMIL1Q5VZK9 1371 aa13.9□□□□□ -0.18
FAM13A-207ENST00000504836 MIER1Q8N108 512 aa13.89□□□□□ -0.19
FAM13A-207ENST00000504836 FGD5Q6ZNL6 1462 aa13.89□□□□□ -0.19
FAM13A-207ENST00000504836 TIAM1Q13009 1591 aa13.87□□□□□ -0.19
FAM13A-207ENST00000504836 FHAD1B1AJZ9 1412 aa13.87□□□□□ -0.19
FAM13A-207ENST00000504836 LRRC9Q6ZRR7 1453 aa13.82□□□□□ -0.2
FAM13A-207ENST00000504836 FANCD2Q9BXW9 1451 aa13.82□□□□□ -0.2
FAM13A-207ENST00000504836 CC2D2AQ9P2K1 1620 aa13.82□□□□□ -0.2
FAM13A-207ENST00000504836 DNMBPQ6XZF7 1577 aa13.81□□□□□ -0.2
FAM13A-207ENST00000504836 YTHDC1Q96MU7 727 aaKnown RBP13.81□□□□□ -0.2
FAM13A-207ENST00000504836 ABCA10Q8WWZ4 1543 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms