RNA–Protein interactions for RNA: ENST00000589248.5

ZNF235-203, Transcript of zinc finger protein 235, humanhuman

TSL 3 BASIC

Gene ZNF235, Length 532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF235-203ENST00000589248 NISCHQ9Y2I1 1504 aa32■■■□□ 2.71
ZNF235-203ENST00000589248 CCDC180Q9P1Z9 1646 aa28.52■■■□□ 2.16
ZNF235-203ENST00000589248 AEBP2Q6ZN18 517 aaPredicted RBP28.42■■■□□ 2.14
ZNF235-203ENST00000589248 ABCC9O60706 1549 aa28.38■■■□□ 2.13
ZNF235-203ENST00000589248 RB1CC1Q8TDY2 1594 aa27.05■■□□□ 1.92
ZNF235-203ENST00000589248 DCAF8L2P0C7V8 631 aa26.99■■□□□ 1.91
ZNF235-203ENST00000589248 NACADO15069 1562 aa26.93■■□□□ 1.9
ZNF235-203ENST00000589248 CHIC1Q5VXU3 224 aa26.86■■□□□ 1.89
ZNF235-203ENST00000589248 MYO15BQ96JP2 1530 aa26.62■■□□□ 1.85
ZNF235-203ENST00000589248 ZCCHC6Q5VYS8 1495 aaKnown RBP26.56■■□□□ 1.84
ZNF235-203ENST00000589248 PABPN1Q86U42 306 aaKnown RBP eCLIP26.52■■□□□ 1.84
ZNF235-203ENST00000589248 UNC13AQ9UPW8 1703 aa26.45■■□□□ 1.82
ZNF235-203ENST00000589248 DNAJC5BQ9UF47 199 aa26.43■■□□□ 1.82
ZNF235-203ENST00000589248 DCAF1Q9Y4B6 1507 aa26.39■■□□□ 1.82
ZNF235-203ENST00000589248 BICRAQ9NZM4 1560 aa26.29■■□□□ 1.8
ZNF235-203ENST00000589248 SCRIBQ14160 1630 aa26.1■■□□□ 1.77
ZNF235-203ENST00000589248 SHROOM4Q9ULL8 1493 aa25.88■■□□□ 1.73
ZNF235-203ENST00000589248 EIF4G1Q04637 1599 aaKnown RBP25.62■■□□□ 1.69
ZNF235-203ENST00000589248 CC2D2AQ9P2K1 1620 aa25.61■■□□□ 1.69
ZNF235-203ENST00000589248 CECR2Q9BXF3 1484 aa25.52■■□□□ 1.68
ZNF235-203ENST00000589248 SMARCA4P51532 1647 aa24.89■■□□□ 1.57
ZNF235-203ENST00000589248 NCAPD3P42695 1498 aa24.89■■□□□ 1.57
ZNF235-203ENST00000589248 ATAD2BQ9ULI0 1458 aa24.87■■□□□ 1.57
ZNF235-203ENST00000589248 BAZ1AQ9NRL2 1556 aaPredicted RBP24.79■■□□□ 1.56
ZNF235-203ENST00000589248 SMARCA2P51531 1590 aa24.77■■□□□ 1.56
ZNF235-203ENST00000589248 HMGXB3Q12766 1538 aa24.7■■□□□ 1.54
ZNF235-203ENST00000589248 MROH2BQ7Z745 1585 aa24.68■■□□□ 1.54
ZNF235-203ENST00000589248 BAZ1BQ9UIG0 1483 aaKnown RBP24.64■■□□□ 1.53
ZNF235-203ENST00000589248 PEG3Q9GZU2 1588 aa24.62■■□□□ 1.53
ZNF235-203ENST00000589248 SENP3Q9H4L4 574 aaPredicted RBP24.52■■□□□ 1.52
ZNF235-203ENST00000589248 NESP48681 1621 aa24.46■■□□□ 1.51
ZNF235-203ENST00000589248 ERCC6Q03468 1493 aa24.46■■□□□ 1.51
ZNF235-203ENST00000589248 WIZO95785 1651 aa24.4■■□□□ 1.5
ZNF235-203ENST00000589248 CUX2O14529 1486 aa24.28■■□□□ 1.48
ZNF235-203ENST00000589248 RSF1Q96T23 1441 aaPredicted RBP24.27■■□□□ 1.48
ZNF235-203ENST00000589248 LAMC3Q9Y6N6 1575 aa24.25■■□□□ 1.47
ZNF235-203ENST00000589248 CADPSQ9ULU8 1353 aa24.16■■□□□ 1.46
ZNF235-203ENST00000589248 PDS5BQ9NTI5 1447 aa24.14■■□□□ 1.45
ZNF235-203ENST00000589248 KIF21AQ7Z4S6 1674 aa24.11■■□□□ 1.45
ZNF235-203ENST00000589248 THOC2Q8NI27 1593 aaKnown RBP24.1■■□□□ 1.45
ZNF235-203ENST00000589248 TOP2AP11388 1531 aaKnown RBP24.07■■□□□ 1.44
ZNF235-203ENST00000589248 PHF23Q9BUL5 403 aaPredicted RBP24.04■■□□□ 1.44
ZNF235-203ENST00000589248 DNAJC5Q9H3Z4 198 aa24.02■■□□□ 1.44
ZNF235-203ENST00000589248 CFTRP13569 1480 aa23.94■■□□□ 1.42
ZNF235-203ENST00000589248 MRC2Q9UBG0 1479 aa23.92■■□□□ 1.42
ZNF235-203ENST00000589248 FANCD2Q9BXW9 1451 aa23.89■■□□□ 1.42
ZNF235-203ENST00000589248 CEP164Q9UPV0 1460 aa23.87■■□□□ 1.41
ZNF235-203ENST00000589248 CCDC88BA6NC98 1476 aa23.84■■□□□ 1.41
ZNF235-203ENST00000589248 WDR62O43379 1518 aa23.84■■□□□ 1.41
ZNF235-203ENST00000589248 URB2Q14146 1524 aaKnown RBP23.69■■□□□ 1.38
ZNF235-203ENST00000589248 PRDM2Q13029 1718 aa23.64■■□□□ 1.38
ZNF235-203ENST00000589248 SUPT5HO00267 1087 aaKnown RBP23.46■■□□□ 1.35
ZNF235-203ENST00000589248 TOPBP1Q92547 1522 aa23.46■■□□□ 1.35
ZNF235-203ENST00000589248 IFT140Q96RY7 1462 aa23.38■■□□□ 1.33
ZNF235-203ENST00000589248 ABCC8Q09428 1581 aa23.38■■□□□ 1.33
ZNF235-203ENST00000589248 DNMBPQ6XZF7 1577 aa23.38■■□□□ 1.33
ZNF235-203ENST00000589248 ZNF608Q9ULD9 1512 aaPredicted RBP23.37■■□□□ 1.33
ZNF235-203ENST00000589248 OSCARQ8IYS5 282 aa23.27■■□□□ 1.32
ZNF235-203ENST00000589248 POLA1P09884 1462 aaPredicted RBP23.24■■□□□ 1.31
ZNF235-203ENST00000589248 TARBP1Q13395 1621 aaKnown RBP23.22■■□□□ 1.31
ZNF235-203ENST00000589248 EIF4G3O43432 1585 aaKnown RBP23.2■■□□□ 1.3
ZNF235-203ENST00000589248 AQRO60306 1485 aaKnown RBP eCLIP23.2■■□□□ 1.3
ZNF235-203ENST00000589248 RAD54L2Q9Y4B4 1467 aa23.19■■□□□ 1.3
ZNF235-203ENST00000589248 CUX1P39880 1505 aa23.17■■□□□ 1.3
ZNF235-203ENST00000589248 SOGA1O94964 1423 aa23.16■■□□□ 1.3
ZNF235-203ENST00000589248 FGD5Q6ZNL6 1462 aa23.14■■□□□ 1.29
ZNF235-203ENST00000589248 TRIM41Q8WV44 630 aa23.13■■□□□ 1.29
ZNF235-203ENST00000589248 TDRD9Q8NDG6 1382 aaKnown RBP23.1■■□□□ 1.29
ZNF235-203ENST00000589248 FBLN2P98095 1184 aa23.01■■□□□ 1.27
ZNF235-203ENST00000589248 CHD1O14646 1710 aa22.97■■□□□ 1.27
ZNF235-203ENST00000589248 WDR97A6NE52 1622 aa22.94■■□□□ 1.26
ZNF235-203ENST00000589248 SNAPC4Q5SXM2 1469 aa22.94■■□□□ 1.26
ZNF235-203ENST00000589248 RIMBP3CA6NJZ7 1639 aa22.91■■□□□ 1.26
ZNF235-203ENST00000589248 RIMBP3BA6NNM3 1639 aa22.91■■□□□ 1.26
ZNF235-203ENST00000589248 RIMBP3Q9UFD9 1639 aa22.91■■□□□ 1.26
ZNF235-203ENST00000589248 GRIN2BQ13224 1484 aa22.9■■□□□ 1.26
ZNF235-203ENST00000589248 WRNQ14191 1432 aaPredicted RBP eCLIP22.88■■□□□ 1.25
ZNF235-203ENST00000589248 ARHGEF11O15085 1522 aa22.87■■□□□ 1.25
ZNF235-203ENST00000589248 ABCA10Q8WWZ4 1543 aa22.87■■□□□ 1.25
ZNF235-203ENST00000589248 GAPVD1Q14C86 1478 aa22.86■■□□□ 1.25
ZNF235-203ENST00000589248 CHMP7Q8WUX9 453 aaPredicted RBP22.86■■□□□ 1.25
ZNF235-203ENST00000589248 MAGI1Q96QZ7 1491 aaPredicted RBP22.85■■□□□ 1.25
ZNF235-203ENST00000589248 SYNJ1O43426 1573 aa22.85■■□□□ 1.25
ZNF235-203ENST00000589248 TOP2BQ02880 1626 aa22.84■■□□□ 1.25
ZNF235-203ENST00000589248 FOXD1Q16676 465 aa22.84■■□□□ 1.25
ZNF235-203ENST00000589248 BIVM-ERCC5R4GMW8 1640 aa22.82■■□□□ 1.24
ZNF235-203ENST00000589248 PBRM1Q86U86 1689 aa22.81■■□□□ 1.24
ZNF235-203ENST00000589248 ABCA5Q8WWZ7 1642 aa22.8■■□□□ 1.24
ZNF235-203ENST00000589248 SYNJ2O15056 1496 aa22.79■■□□□ 1.24
ZNF235-203ENST00000589248 CYB5RLQ6IPT4 315 aa22.75■■□□□ 1.23
ZNF235-203ENST00000589248 CLASP1Q7Z460 1538 aa22.72■■□□□ 1.23
ZNF235-203ENST00000589248 ARAP1Q96P48 1450 aa22.68■■□□□ 1.22
ZNF235-203ENST00000589248 ADAMTS12P58397 1594 aa22.62■■□□□ 1.21
ZNF235-203ENST00000589248 GRIN2AQ12879 1464 aa22.6■■□□□ 1.21
ZNF235-203ENST00000589248 FHAD1B1AJZ9 1412 aa22.57■■□□□ 1.2
ZNF235-203ENST00000589248 ERICH3Q5RHP9 1530 aa22.57■■□□□ 1.2
ZNF235-203ENST00000589248 CEP170Q5SW79 1584 aa22.52■■□□□ 1.2
ZNF235-203ENST00000589248 NUP160Q12769 1436 aa22.52■■□□□ 1.2
ZNF235-203ENST00000589248 ERCC6L2Q5T890 1561 aa22.44■■□□□ 1.18
ZNF235-203ENST00000589248 POTEDQ86YR6 584 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms