RNA–Protein interactions for RNA: ENST00000502840.5

CDC42SE2-205, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-205ENST00000502840 AEBP2Q6ZN18 517 aaPredicted RBP17.24■□□□□ 0.35
CDC42SE2-205ENST00000502840 CHIC1Q5VXU3 224 aa16.18■□□□□ 0.18
CDC42SE2-205ENST00000502840 SENP3Q9H4L4 574 aaPredicted RBP14.96□□□□□ -0.01
CDC42SE2-205ENST00000502840 POTEDQ86YR6 584 aa14.89□□□□□ -0.03
CDC42SE2-205ENST00000502840 PHF23Q9BUL5 403 aaPredicted RBP14.56□□□□□ -0.08
CDC42SE2-205ENST00000502840 FOXD1Q16676 465 aa14□□□□□ -0.17
CDC42SE2-205ENST00000502840 MSH5O43196 834 aa13.58□□□□□ -0.24
CDC42SE2-205ENST00000502840 PIAS4Q8N2W9 510 aaPredicted RBP12.84□□□□□ -0.35
CDC42SE2-205ENST00000502840 PLPPR3Q6T4P5 718 aa12.63□□□□□ -0.39
CDC42SE2-205ENST00000502840 PPP6R1Q9UPN7 881 aa12.28□□□□□ -0.44
CDC42SE2-205ENST00000502840 CACNB1Q02641 598 aaPredicted RBP12.2□□□□□ -0.46
CDC42SE2-205ENST00000502840 ADRA2BP18089 450 aa12.18□□□□□ -0.46
CDC42SE2-205ENST00000502840 DMRT2Q9Y5R5 561 aa11.69□□□□□ -0.54
CDC42SE2-205ENST00000502840 POTEHQ6S545 545 aa11.49□□□□□ -0.57
CDC42SE2-205ENST00000502840 MAPK8IP2Q13387 824 aaPredicted RBP11.46□□□□□ -0.57
CDC42SE2-205ENST00000502840 RNF39Q9H2S5 420 aa11.46□□□□□ -0.57
CDC42SE2-205ENST00000502840 C1QBPQ07021 282 aaKnown RBP11.27□□□□□ -0.61
CDC42SE2-205ENST00000502840 SCAF1Q9H7N4 1312 aaKnown RBP11.27□□□□□ -0.61
CDC42SE2-205ENST00000502840 DCAF8L1A6NGE4 600 aa11.16□□□□□ -0.62
CDC42SE2-205ENST00000502840 PPP4R3CPQ6ZMV5 832 aa11.1□□□□□ -0.63
CDC42SE2-205ENST00000502840 HOXD11P31277 338 aaPredicted RBP10.88□□□□□ -0.67
CDC42SE2-205ENST00000502840 CNKSR2Q8WXI2 1034 aa10.84□□□□□ -0.67
CDC42SE2-205ENST00000502840 DNAJC5BQ9UF47 199 aa10.81□□□□□ -0.68
CDC42SE2-205ENST00000502840 NCBP3Q53F19 620 aaKnown RBP10.72□□□□□ -0.69
CDC42SE2-205ENST00000502840 RNF216Q9NWF9 866 aaPredicted RBP10.68□□□□□ -0.7
CDC42SE2-205ENST00000502840 KCNA4P22459 653 aa10.63□□□□□ -0.71
CDC42SE2-205ENST00000502840 NPM3O75607 178 aaKnown RBP10.61□□□□□ -0.71
CDC42SE2-205ENST00000502840 DSG3P32926 999 aa10.37□□□□□ -0.75
CDC42SE2-205ENST00000502840 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.31□□□□□ -0.761e-6■■■■□ 21
CDC42SE2-205ENST00000502840 SP7Q8TDD2 431 aaPredicted RBP10.3□□□□□ -0.76
CDC42SE2-205ENST00000502840 CAPN15O75808 1086 aa10.15□□□□□ -0.78
CDC42SE2-205ENST00000502840 CHRDL2Q6WN34 429 aa10.11□□□□□ -0.79
CDC42SE2-205ENST00000502840 SPINK5Q9NQ38 1064 aaPredicted RBP10.1□□□□□ -0.79
CDC42SE2-205ENST00000502840 SLC4A2P04920 1241 aa10.08□□□□□ -0.8
CDC42SE2-205ENST00000502840 SLC4A1APQ9BWU0 796 aaKnown RBP10.06□□□□□ -0.8
CDC42SE2-205ENST00000502840 U3KPZ7 1027 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE2-205ENST00000502840 RBM42Q9BTD8 480 aaKnown RBP9.98□□□□□ -0.81
CDC42SE2-205ENST00000502840 FOXD4L1Q9NU39 408 aa9.84□□□□□ -0.83
CDC42SE2-205ENST00000502840 PLSCR2Q9NRY7 297 aa9.82□□□□□ -0.84
CDC42SE2-205ENST00000502840 MYCNP04198 464 aaPredicted RBP9.8□□□□□ -0.84
CDC42SE2-205ENST00000502840 ZBTB22O15209 634 aa9.79□□□□□ -0.84
CDC42SE2-205ENST00000502840 ABCB7O75027 752 aa9.78□□□□□ -0.84
CDC42SE2-205ENST00000502840 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.77□□□□□ -0.85
CDC42SE2-205ENST00000502840 HNRNPUL2Q1KMD3 747 aaKnown RBP9.77□□□□□ -0.85
CDC42SE2-205ENST00000502840 ZNF219Q9P2Y4 722 aaPredicted RBP9.76□□□□□ -0.85
CDC42SE2-205ENST00000502840 TRHP20396 242 aaPredicted RBP9.73□□□□□ -0.85
CDC42SE2-205ENST00000502840 SAMD1Q6SPF0 538 aaPredicted RBP9.73□□□□□ -0.85
CDC42SE2-205ENST00000502840 HAX1O00165 279 aa9.72□□□□□ -0.85
CDC42SE2-205ENST00000502840 APLP2Q06481 763 aa9.71□□□□□ -0.86
CDC42SE2-205ENST00000502840 LHX8Q68G74 356 aa9.64□□□□□ -0.87
CDC42SE2-205ENST00000502840 PIP4P2Q8N4L2 257 aa9.63□□□□□ -0.87
CDC42SE2-205ENST00000502840 ATF5Q9Y2D1 282 aaPredicted RBP9.57□□□□□ -0.88
CDC42SE2-205ENST00000502840 CSRNP3Q8WYN3 585 aa9.56□□□□□ -0.88
CDC42SE2-205ENST00000502840 EHMT2Q96KQ7 1210 aa9.53□□□□□ -0.88
CDC42SE2-205ENST00000502840 AKT1S1Q96B36 256 aa9.52□□□□□ -0.89
CDC42SE2-205ENST00000502840 ATXN8OSP0DMR3 200 aa9.51□□□□□ -0.89
CDC42SE2-205ENST00000502840 EVX2Q03828 476 aa9.48□□□□□ -0.89
CDC42SE2-205ENST00000502840 FXR2P51116 673 aaKnown RBP eCLIP9.45□□□□□ -0.9
CDC42SE2-205ENST00000502840 POLA2Q14181 598 aa9.43□□□□□ -0.9
CDC42SE2-205ENST00000502840 REM2Q8IYK8 340 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE2-205ENST00000502840 PITPNM1O00562 1244 aa9.28□□□□□ -0.92
CDC42SE2-205ENST00000502840 GABBR2O75899 941 aa9.27□□□□□ -0.93
CDC42SE2-205ENST00000502840 ZBTB12Q9Y330 459 aaPredicted RBP9.25□□□□□ -0.93
CDC42SE2-205ENST00000502840 C19orf67A6NJJ6 358 aa9.18□□□□□ -0.94
CDC42SE2-205ENST00000502840 PCDH10Q9P2E7 1040 aa9.15□□□□□ -0.94
CDC42SE2-205ENST00000502840 MKRN4PQ13434 485 aaPredicted RBP9.14□□□□□ -0.95
CDC42SE2-205ENST00000502840 OSCARQ8IYS5 282 aa9.14□□□□□ -0.95
CDC42SE2-205ENST00000502840 FBLN2P98095 1184 aa9.13□□□□□ -0.95
CDC42SE2-205ENST00000502840 POTEMA6NI47 508 aa9.12□□□□□ -0.95
CDC42SE2-205ENST00000502840 POTEIP0CG38 1075 aa9.04□□□□□ -0.96
CDC42SE2-205ENST00000502840 POTEGQ6S5H5 508 aa9.04□□□□□ -0.96
CDC42SE2-205ENST00000502840 PRKAR2AP13861 404 aaKnown RBP9.03□□□□□ -0.96
CDC42SE2-205ENST00000502840 SPDYE2BA6NHP3 402 aa9.01□□□□□ -0.97
CDC42SE2-205ENST00000502840 SPDYE6P0CI01 402 aa9.01□□□□□ -0.97
CDC42SE2-205ENST00000502840 SPDYE2Q495Y8 402 aa9.01□□□□□ -0.97
CDC42SE2-205ENST00000502840 SSUH2Q9Y2M2 353 aa8.94□□□□□ -0.98
CDC42SE2-205ENST00000502840 CLCN6P51797 869 aa8.92□□□□□ -0.98
CDC42SE2-205ENST00000502840 ZNF692Q9BU19 519 aaPredicted RBP8.92□□□□□ -0.98
CDC42SE2-205ENST00000502840 OTUD5Q96G74 571 aa8.91□□□□□ -0.98
CDC42SE2-205ENST00000502840 DCBLD2Q96PD2 775 aa8.82□□□□□ -1
CDC42SE2-205ENST00000502840 SPDYE4A6NLX3 237 aa8.8□□□□□ -1
CDC42SE2-205ENST00000502840 PABPN1Q86U42 306 aaKnown RBP eCLIP8.8□□□□□ -1
CDC42SE2-205ENST00000502840 SPDYE1Q8NFV5 336 aaPredicted RBP8.78□□□□□ -1
CDC42SE2-205ENST00000502840 CLEC11AQ9Y240 323 aa8.74□□□□□ -1.01
CDC42SE2-205ENST00000502840 POTEB2H3BUK9 544 aa8.7□□□□□ -1.02
CDC42SE2-205ENST00000502840 CD44P16070 742 aaKnown RBP8.68□□□□□ -1.02
CDC42SE2-205ENST00000502840 PROM2Q8N271 834 aa8.68□□□□□ -1.02
CDC42SE2-205ENST00000502840 CHADLQ6NUI6 762 aa8.65□□□□□ -1.02
CDC42SE2-205ENST00000502840 PRR29P0C7W0 189 aa8.63□□□□□ -1.03
CDC42SE2-205ENST00000502840 FKBP8Q14318 412 aa8.63□□□□□ -1.03
CDC42SE2-205ENST00000502840 LCE2DQ5TA82 110 aaPredicted RBP8.62□□□□□ -1.03
CDC42SE2-205ENST00000502840 STAG3Q9UJ98 1225 aa8.61□□□□□ -1.03
CDC42SE2-205ENST00000502840 ZNF579Q8NAF0 562 aaKnown RBP8.55□□□□□ -1.04
CDC42SE2-205ENST00000502840 FAM163AQ96GL9 167 aaPredicted RBP8.53□□□□□ -1.04
CDC42SE2-205ENST00000502840 MAMSTRQ6ZN01 415 aa8.52□□□□□ -1.05
CDC42SE2-205ENST00000502840 CREBZFQ9NS37 354 aa8.51□□□□□ -1.05
CDC42SE2-205ENST00000502840 CDAN1Q8IWY9 1227 aa8.5□□□□□ -1.05
CDC42SE2-205ENST00000502840 FARP1Q9Y4F1 1045 aaPredicted RBP8.5□□□□□ -1.05
CDC42SE2-205ENST00000502840 GALR2O43603 387 aaPredicted RBP8.45□□□□□ -1.06
CDC42SE2-205ENST00000502840 MNX1P50219 401 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms