RNA–Protein interactions for RNA: ENST00000545279.5

SMAD5-211, Transcript of SMAD family member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD5, Length 7,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-211ENST00000545279 DCAF8L2P0C7V8 631 aa12.11□□□□□ -0.47
SMAD5-211ENST00000545279 NISCHQ9Y2I1 1504 aa11.74□□□□□ -0.53
SMAD5-211ENST00000545279 FAM9AQ8IZU1 332 aaPredicted RBP11.21□□□□□ -0.62
SMAD5-211ENST00000545279 SUPT5HO00267 1087 aaKnown RBP10.73□□□□□ -0.69
SMAD5-211ENST00000545279 SHROOM4Q9ULL8 1493 aa10.64□□□□□ -0.71
SMAD5-211ENST00000545279 ABCC9O60706 1549 aa10.63□□□□□ -0.71
SMAD5-211ENST00000545279 APLP2Q06481 763 aa10.58□□□□□ -0.71
SMAD5-211ENST00000545279 PABPN1Q86U42 306 aaKnown RBP eCLIP10.4□□□□□ -0.74
SMAD5-211ENST00000545279 MYT1LQ9UL68 1186 aa10.26□□□□□ -0.77
SMAD5-211ENST00000545279 ATP1B4Q9UN42 357 aaPredicted RBP10.22□□□□□ -0.77
SMAD5-211ENST00000545279 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.2□□□□□ -0.78
SMAD5-211ENST00000545279 HNRNPUL2Q1KMD3 747 aaKnown RBP10.2□□□□□ -0.78
SMAD5-211ENST00000545279 TRIM41Q8WV44 630 aa10.17□□□□□ -0.78
SMAD5-211ENST00000545279 NPM1P06748 294 aaKnown RBP eCLIP10.11□□□□□ -0.79
SMAD5-211ENST00000545279 EHMT2Q96KQ7 1210 aa10.11□□□□□ -0.79
SMAD5-211ENST00000545279 FBLN2P98095 1184 aa10.11□□□□□ -0.79
SMAD5-211ENST00000545279 UBTFP17480 764 aaKnown RBP10.1□□□□□ -0.79
SMAD5-211ENST00000545279 RANGAP1P46060 587 aaPredicted RBP10.07□□□□□ -0.8
SMAD5-211ENST00000545279 TTBK1Q5TCY1 1321 aaPredicted RBP10.06□□□□□ -0.8
SMAD5-211ENST00000545279 RB1CC1Q8TDY2 1594 aa9.98□□□□□ -0.81
SMAD5-211ENST00000545279 ESF1Q9H501 851 aaKnown RBP9.96□□□□□ -0.82
SMAD5-211ENST00000545279 SCRIBQ14160 1630 aa9.85□□□□□ -0.83
SMAD5-211ENST00000545279 CDK11AQ9UQ88 783 aaPredicted RBP9.85□□□□□ -0.83
SMAD5-211ENST00000545279 ERCC6Q03468 1493 aa9.84□□□□□ -0.83
SMAD5-211ENST00000545279 CHMP7Q8WUX9 453 aaPredicted RBP9.81□□□□□ -0.84
SMAD5-211ENST00000545279 NACADO15069 1562 aa9.8□□□□□ -0.84
SMAD5-211ENST00000545279 CCDC180Q9P1Z9 1646 aa9.77□□□□□ -0.85
SMAD5-211ENST00000545279 TRHP20396 242 aaPredicted RBP9.73□□□□□ -0.85
SMAD5-211ENST00000545279 CHIC1Q5VXU3 224 aa9.72□□□□□ -0.85
SMAD5-211ENST00000545279 BCANQ96GW7 911 aa9.68□□□□□ -0.86
SMAD5-211ENST00000545279 ZCCHC6Q5VYS8 1495 aaKnown RBP9.62□□□□□ -0.87
SMAD5-211ENST00000545279 PDS5BQ9NTI5 1447 aa9.62□□□□□ -0.87
SMAD5-211ENST00000545279 AEBP2Q6ZN18 517 aaPredicted RBP9.61□□□□□ -0.87
SMAD5-211ENST00000545279 STAG3Q9UJ98 1225 aa9.61□□□□□ -0.87
SMAD5-211ENST00000545279 BAZ1BQ9UIG0 1483 aaKnown RBP9.58□□□□□ -0.88
SMAD5-211ENST00000545279 CECR2Q9BXF3 1484 aa9.56□□□□□ -0.88
SMAD5-211ENST00000545279 ARID4BQ4LE39 1312 aaPredicted RBP9.54□□□□□ -0.88
SMAD5-211ENST00000545279 ZNF777Q9ULD5 760 aaPredicted RBP9.51□□□□□ -0.89
SMAD5-211ENST00000545279 PLPPR3Q6T4P5 718 aa9.51□□□□□ -0.89
SMAD5-211ENST00000545279 ITGAEP38570 1179 aa9.5□□□□□ -0.89
SMAD5-211ENST00000545279 SLC4A1APQ9BWU0 796 aaKnown RBP9.49□□□□□ -0.89
SMAD5-211ENST00000545279 PELP1Q8IZL8 1130 aaKnown RBP9.49□□□□□ -0.89
SMAD5-211ENST00000545279 CSRNP3Q8WYN3 585 aa9.49□□□□□ -0.89
SMAD5-211ENST00000545279 TRIM52Q96A61 297 aa9.49□□□□□ -0.89
SMAD5-211ENST00000545279 PLEKHD1A6NEE1 506 aa9.49□□□□□ -0.89
SMAD5-211ENST00000545279 OSCARQ8IYS5 282 aa9.48□□□□□ -0.89
SMAD5-211ENST00000545279 FAM50AQ14320 339 aaKnown RBP9.47□□□□□ -0.89
SMAD5-211ENST00000545279 ARID3CA6NKF2 412 aa9.46□□□□□ -0.89
SMAD5-211ENST00000545279 TSPY4P0CV99 314 aa9.45□□□□□ -0.9
SMAD5-211ENST00000545279 TSPY10P0CW01 314 aa9.45□□□□□ -0.9
SMAD5-211ENST00000545279 P3H3Q8IVL6 736 aa9.43□□□□□ -0.9
SMAD5-211ENST00000545279 DCAF1Q9Y4B6 1507 aa9.43□□□□□ -0.9
SMAD5-211ENST00000545279 MYO15BQ96JP2 1530 aa9.4□□□□□ -0.9
SMAD5-211ENST00000545279 KCNH8Q96L42 1107 aa9.4□□□□□ -0.9
SMAD5-211ENST00000545279 PPP1R15AO75807 674 aaPredicted RBP9.4□□□□□ -0.9
SMAD5-211ENST00000545279 CCER1Q8TC90 406 aaPredicted RBP9.39□□□□□ -0.91
SMAD5-211ENST00000545279 PCGF6Q9BYE7 350 aa9.39□□□□□ -0.91
SMAD5-211ENST00000545279 C14orf37Q86TY3 774 aa9.38□□□□□ -0.91
SMAD5-211ENST00000545279 CHGAP10645 457 aaKnown RBP9.38□□□□□ -0.91
SMAD5-211ENST00000545279 ZEB1P37275 1124 aaPredicted RBP9.37□□□□□ -0.91
SMAD5-211ENST00000545279 ACIN1Q9UKV3 1341 aaKnown RBP9.37□□□□□ -0.91
SMAD5-211ENST00000545279 NEFMP07197 916 aa9.37□□□□□ -0.91
SMAD5-211ENST00000545279 HDGFP51858 240 aaKnown RBP9.37□□□□□ -0.91
SMAD5-211ENST00000545279 SMARCA2P51531 1590 aa9.37□□□□□ -0.91
SMAD5-211ENST00000545279 CARMIL2Q6F5E8 1435 aa9.36□□□□□ -0.91
SMAD5-211ENST00000545279 BAZ1AQ9NRL2 1556 aaPredicted RBP9.36□□□□□ -0.91
SMAD5-211ENST00000545279 POLR3GLQ9BT43 218 aa9.35□□□□□ -0.91
SMAD5-211ENST00000545279 CADPSQ9ULU8 1353 aa9.33□□□□□ -0.92
SMAD5-211ENST00000545279 WRNQ14191 1432 aaPredicted RBP eCLIP9.32□□□□□ -0.92
SMAD5-211ENST00000545279 KIF27Q86VH2 1401 aa9.31□□□□□ -0.92
SMAD5-211ENST00000545279 HAP1P54257 671 aaPredicted RBP9.31□□□□□ -0.92
SMAD5-211ENST00000545279 RSF1Q96T23 1441 aaPredicted RBP9.28□□□□□ -0.92
SMAD5-211ENST00000545279 MTUS2Q5JR59 1369 aa9.27□□□□□ -0.93
SMAD5-211ENST00000545279 CYB5RLQ6IPT4 315 aa9.26□□□□□ -0.93
SMAD5-211ENST00000545279 EEA1Q15075 1411 aa9.25□□□□□ -0.93
SMAD5-211ENST00000545279 NPM2Q86SE8 214 aaKnown RBP9.25□□□□□ -0.93
SMAD5-211ENST00000545279 SCAF1Q9H7N4 1312 aaKnown RBP9.24□□□□□ -0.93
SMAD5-211ENST00000545279 ZNF326Q5BKZ1 582 aaKnown RBP9.24□□□□□ -0.93
SMAD5-211ENST00000545279 ABCC8Q09428 1581 aa9.23□□□□□ -0.93
SMAD5-211ENST00000545279 FOXD1Q16676 465 aa9.23□□□□□ -0.93
SMAD5-211ENST00000545279 CEP164Q9UPV0 1460 aa9.22□□□□□ -0.93
SMAD5-211ENST00000545279 CFDP1Q9UEE9 299 aaPredicted RBP9.21□□□□□ -0.94
SMAD5-211ENST00000545279 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.21□□□□□ -0.949e-6■■■□□ 18.9
SMAD5-211ENST00000545279 SOGA1O94964 1423 aa9.2□□□□□ -0.94
SMAD5-211ENST00000545279 EFCAB2Q5VUJ9 269 aa9.19□□□□□ -0.94
SMAD5-211ENST00000545279 KANK1Q14678 1352 aa9.18□□□□□ -0.94
SMAD5-211ENST00000545279 CLIP1P30622 1438 aa9.17□□□□□ -0.94
SMAD5-211ENST00000545279 SLC24A1O60721 1099 aa9.16□□□□□ -0.94
SMAD5-211ENST00000545279 MLECQ14165 292 aa9.16□□□□□ -0.94
SMAD5-211ENST00000545279 TDRD9Q8NDG6 1382 aaKnown RBP9.14□□□□□ -0.95
SMAD5-211ENST00000545279 PPARGC1BQ86YN6 1023 aaKnown RBP9.14□□□□□ -0.95
SMAD5-211ENST00000545279 CUX2O14529 1486 aa9.14□□□□□ -0.95
SMAD5-211ENST00000545279 CARMIL1Q5VZK9 1371 aa9.14□□□□□ -0.95
SMAD5-211ENST00000545279 ATAD2BQ9ULI0 1458 aa9.13□□□□□ -0.95
SMAD5-211ENST00000545279 A0A0G2JS52 829 aa9.12□□□□□ -0.95
SMAD5-211ENST00000545279 MYT1Q01538 1121 aa9.12□□□□□ -0.95
SMAD5-211ENST00000545279 NEFLP07196 543 aa9.12□□□□□ -0.95
SMAD5-211ENST00000545279 NCAPD3P42695 1498 aa9.12□□□□□ -0.95
SMAD5-211ENST00000545279 EID1Q9Y6B2 187 aa9.11□□□□□ -0.95
SMAD5-211ENST00000545279 CCNB3Q8WWL7 1395 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms