RNA–Protein interactions for RNA: ENST00000503556.5

FAM13A-205, Transcript of family with sequence similarity 13 member A, humanhuman

TSL 1 (best) BASIC

Gene FAM13A, Length 3,386 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM13A-205ENST00000503556 NISCHQ9Y2I1 1504 aa17.58■□□□□ 0.4
FAM13A-205ENST00000503556 DCAF8L2P0C7V8 631 aa15.15■□□□□ 0.02
FAM13A-205ENST00000503556 SHROOM4Q9ULL8 1493 aa15.1■□□□□ 0.01
FAM13A-205ENST00000503556 CCDC180Q9P1Z9 1646 aa14.94□□□□□ -0.02
FAM13A-205ENST00000503556 ZCCHC6Q5VYS8 1495 aaKnown RBP14.75□□□□□ -0.05
FAM13A-205ENST00000503556 ABCC9O60706 1549 aa14.62□□□□□ -0.07
FAM13A-205ENST00000503556 SUPT5HO00267 1087 aaKnown RBP14.58□□□□□ -0.08
FAM13A-205ENST00000503556 SCRIBQ14160 1630 aa14.26□□□□□ -0.13
FAM13A-205ENST00000503556 DCAF1Q9Y4B6 1507 aa14.21□□□□□ -0.13
FAM13A-205ENST00000503556 PABPN1Q86U42 306 aaKnown RBP eCLIP14.02□□□□□ -0.16
FAM13A-205ENST00000503556 NACADO15069 1562 aa13.97□□□□□ -0.17
FAM13A-205ENST00000503556 CECR2Q9BXF3 1484 aa13.93□□□□□ -0.18
FAM13A-205ENST00000503556 MYO15BQ96JP2 1530 aa13.9□□□□□ -0.18
FAM13A-205ENST00000503556 RB1CC1Q8TDY2 1594 aa13.89□□□□□ -0.19
FAM13A-205ENST00000503556 RSF1Q96T23 1441 aaPredicted RBP13.83□□□□□ -0.2
FAM13A-205ENST00000503556 CHIC1Q5VXU3 224 aa13.8□□□□□ -0.2
FAM13A-205ENST00000503556 MROH2BQ7Z745 1585 aa13.76□□□□□ -0.21
FAM13A-205ENST00000503556 UNC13AQ9UPW8 1703 aa13.76□□□□□ -0.21
FAM13A-205ENST00000503556 WIZO95785 1651 aa13.67□□□□□ -0.22
FAM13A-205ENST00000503556 EHMT2Q96KQ7 1210 aa13.64□□□□□ -0.23
FAM13A-205ENST00000503556 BICRAQ9NZM4 1560 aa13.63□□□□□ -0.23
FAM13A-205ENST00000503556 LOC105371045A0A1W2PR82 267 aa13.57□□□□□ -0.24
FAM13A-205ENST00000503556 FAM9AQ8IZU1 332 aaPredicted RBP13.56□□□□□ -0.24
FAM13A-205ENST00000503556 BAZ1AQ9NRL2 1556 aaPredicted RBP13.48□□□□□ -0.25
FAM13A-205ENST00000503556 SMARCA4P51532 1647 aa13.47□□□□□ -0.25
FAM13A-205ENST00000503556 TRIM41Q8WV44 630 aa13.46□□□□□ -0.26
FAM13A-205ENST00000503556 CCDC88BA6NC98 1476 aa13.36□□□□□ -0.27
FAM13A-205ENST00000503556 ABCC8Q09428 1581 aa13.29□□□□□ -0.28
FAM13A-205ENST00000503556 TOP2AP11388 1531 aaKnown RBP13.29□□□□□ -0.28
FAM13A-205ENST00000503556 ATAD2BQ9ULI0 1458 aa13.27□□□□□ -0.28
FAM13A-205ENST00000503556 SMARCA2P51531 1590 aa13.27□□□□□ -0.29
FAM13A-205ENST00000503556 BAZ1BQ9UIG0 1483 aaKnown RBP13.22□□□□□ -0.29
FAM13A-205ENST00000503556 DNAJC5BQ9UF47 199 aa13.2□□□□□ -0.3
FAM13A-205ENST00000503556 EIF4G1Q04637 1599 aaKnown RBP13.2□□□□□ -0.3
FAM13A-205ENST00000503556 PPARGC1BQ86YN6 1023 aaKnown RBP13.13□□□□□ -0.31
FAM13A-205ENST00000503556 PEG3Q9GZU2 1588 aa13.1□□□□□ -0.31
FAM13A-205ENST00000503556 RUSC2Q8N2Y8 1516 aa13.09□□□□□ -0.31
FAM13A-205ENST00000503556 SOGA1O94964 1423 aa13.09□□□□□ -0.31
FAM13A-205ENST00000503556 PCGF6Q9BYE7 350 aa13.07□□□□□ -0.32
FAM13A-205ENST00000503556 RANGAP1P46060 587 aaPredicted RBP13.04□□□□□ -0.32
FAM13A-205ENST00000503556 TTBK1Q5TCY1 1321 aaPredicted RBP13.03□□□□□ -0.32
FAM13A-205ENST00000503556 CC2D2AQ9P2K1 1620 aa13.02□□□□□ -0.32
FAM13A-205ENST00000503556 NCAPD3P42695 1498 aa13.01□□□□□ -0.33
FAM13A-205ENST00000503556 WRNQ14191 1432 aaPredicted RBP eCLIP12.99□□□□□ -0.33
FAM13A-205ENST00000503556 SYNJ1O43426 1573 aa12.97□□□□□ -0.33
FAM13A-205ENST00000503556 UBTFP17480 764 aaKnown RBP12.93□□□□□ -0.34
FAM13A-205ENST00000503556 NESP48681 1621 aa12.91□□□□□ -0.34
FAM13A-205ENST00000503556 HMGXB3Q12766 1538 aa12.9□□□□□ -0.34
FAM13A-205ENST00000503556 CSRNP3Q8WYN3 585 aa12.89□□□□□ -0.35
FAM13A-205ENST00000503556 CFTRP13569 1480 aa12.82□□□□□ -0.36
FAM13A-205ENST00000503556 CADPSQ9ULU8 1353 aa12.81□□□□□ -0.36
FAM13A-205ENST00000503556 CUX1P39880 1505 aa12.8□□□□□ -0.36
FAM13A-205ENST00000503556 RAPGEF2Q9Y4G8 1499 aa12.74□□□□□ -0.37
FAM13A-205ENST00000503556 CEP162Q5TB80 1403 aa12.73□□□□□ -0.37
FAM13A-205ENST00000503556 TOP2BQ02880 1626 aa12.72□□□□□ -0.37
FAM13A-205ENST00000503556 FANCD2Q9BXW9 1451 aa12.71□□□□□ -0.38
FAM13A-205ENST00000503556 TRIM26Q12899 539 aaPredicted RBP12.7□□□□□ -0.38
FAM13A-205ENST00000503556 RAD54L2Q9Y4B4 1467 aa12.68□□□□□ -0.38
FAM13A-205ENST00000503556 FGD5Q6ZNL6 1462 aa12.65□□□□□ -0.38
FAM13A-205ENST00000503556 CUX2O14529 1486 aa12.65□□□□□ -0.38
FAM13A-205ENST00000503556 GOLGA3Q08378 1498 aa12.64□□□□□ -0.39
FAM13A-205ENST00000503556 TNIKQ9UKE5 1360 aa12.64□□□□□ -0.39
FAM13A-205ENST00000503556 BIVM-ERCC5R4GMW8 1640 aa12.63□□□□□ -0.39
FAM13A-205ENST00000503556 P3H3Q8IVL6 736 aa12.61□□□□□ -0.39
FAM13A-205ENST00000503556 EEA1Q15075 1411 aa12.6□□□□□ -0.39
FAM13A-205ENST00000503556 CEP164Q9UPV0 1460 aa12.6□□□□□ -0.39
FAM13A-205ENST00000503556 TDRD9Q8NDG6 1382 aaKnown RBP12.6□□□□□ -0.39
FAM13A-205ENST00000503556 KIF27Q86VH2 1401 aa12.58□□□□□ -0.39
FAM13A-205ENST00000503556 HRCP23327 699 aa12.58□□□□□ -0.4
FAM13A-205ENST00000503556 CLIP1P30622 1438 aa12.57□□□□□ -0.4
FAM13A-205ENST00000503556 URB2Q14146 1524 aaKnown RBP12.57□□□□□ -0.4
FAM13A-205ENST00000503556 IGF1RP08069 1367 aa12.57□□□□□ -0.4
FAM13A-205ENST00000503556 TOPBP1Q92547 1522 aa12.56□□□□□ -0.4
FAM13A-205ENST00000503556 POLA1P09884 1462 aaPredicted RBP12.55□□□□□ -0.4
FAM13A-205ENST00000503556 KIF21AQ7Z4S6 1674 aa12.53□□□□□ -0.4
FAM13A-205ENST00000503556 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.53□□□□□ -0.4
FAM13A-205ENST00000503556 PRDM2Q13029 1718 aa12.52□□□□□ -0.4
FAM13A-205ENST00000503556 PRXQ9BXM0 1461 aa12.52□□□□□ -0.4
FAM13A-205ENST00000503556 KIF21BO75037 1637 aa12.51□□□□□ -0.41
FAM13A-205ENST00000503556 ATP1B4Q9UN42 357 aaPredicted RBP12.5□□□□□ -0.41
FAM13A-205ENST00000503556 CARMIL1Q5VZK9 1371 aa12.5□□□□□ -0.41
FAM13A-205ENST00000503556 PDS5BQ9NTI5 1447 aa12.48□□□□□ -0.41
FAM13A-205ENST00000503556 LAMC3Q9Y6N6 1575 aa12.47□□□□□ -0.41
FAM13A-205ENST00000503556 KANK4Q5T7N3 995 aaPredicted RBP12.47□□□□□ -0.41
FAM13A-205ENST00000503556 HNRNPUL2Q1KMD3 747 aaKnown RBP12.47□□□□□ -0.41
FAM13A-205ENST00000503556 DNMBPQ6XZF7 1577 aa12.47□□□□□ -0.41
FAM13A-205ENST00000503556 AQRO60306 1485 aaKnown RBP eCLIP12.45□□□□□ -0.429e-7■■■■□ 21.5
FAM13A-205ENST00000503556 ARAP1Q96P48 1450 aa12.45□□□□□ -0.42
FAM13A-205ENST00000503556 ARID3CA6NKF2 412 aa12.42□□□□□ -0.42
FAM13A-205ENST00000503556 APLP2Q06481 763 aa12.42□□□□□ -0.42
FAM13A-205ENST00000503556 ERCC6Q03468 1493 aa12.4□□□□□ -0.43
FAM13A-205ENST00000503556 VPS8Q8N3P4 1428 aa12.39□□□□□ -0.43
FAM13A-205ENST00000503556 ZNF608Q9ULD9 1512 aaPredicted RBP12.39□□□□□ -0.43
FAM13A-205ENST00000503556 ABCA10Q8WWZ4 1543 aa12.38□□□□□ -0.43
FAM13A-205ENST00000503556 ARHGAP35Q9NRY4 1499 aa12.38□□□□□ -0.43
FAM13A-205ENST00000503556 ITGAEP38570 1179 aa12.38□□□□□ -0.43
FAM13A-205ENST00000503556 FBLN2P98095 1184 aa12.38□□□□□ -0.43
FAM13A-205ENST00000503556 ERICH3Q5RHP9 1530 aa12.37□□□□□ -0.43
FAM13A-205ENST00000503556 GAPVD1Q14C86 1478 aa12.36□□□□□ -0.43
FAM13A-205ENST00000503556 FHOD3Q2V2M9 1422 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms