RNA–Protein interactions for RNA: ENST00000404136.2

CWC22-201, Transcript of CWC22 spliceosome associated protein homolog, humanhuman

TSL 1 (best)

Gene CWC22, Length 2,392 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CWC22-201ENST00000404136 AEBP2Q6ZN18 517 aaPredicted RBP13.81□□□□□ -0.2
CWC22-201ENST00000404136 CHIC1Q5VXU3 224 aa12.85□□□□□ -0.35
CWC22-201ENST00000404136 SENP3Q9H4L4 574 aaPredicted RBP11.69□□□□□ -0.54
CWC22-201ENST00000404136 PHF23Q9BUL5 403 aaPredicted RBP11.59□□□□□ -0.55
CWC22-201ENST00000404136 NISCHQ9Y2I1 1504 aa11.11□□□□□ -0.63
CWC22-201ENST00000404136 FOXD1Q16676 465 aa11□□□□□ -0.65
CWC22-201ENST00000404136 ABCC9O60706 1549 aa10.86□□□□□ -0.67
CWC22-201ENST00000404136 DNAJC5BQ9UF47 199 aa10.71□□□□□ -0.69
CWC22-201ENST00000404136 DNAJC5Q9H3Z4 198 aa10.44□□□□□ -0.74
CWC22-201ENST00000404136 POTEDQ86YR6 584 aa10.39□□□□□ -0.75
CWC22-201ENST00000404136 PIAS4Q8N2W9 510 aaPredicted RBP10.25□□□□□ -0.77
CWC22-201ENST00000404136 MSH5O43196 834 aa10.24□□□□□ -0.77
CWC22-201ENST00000404136 PPP6R1Q9UPN7 881 aa10.23□□□□□ -0.77
CWC22-201ENST00000404136 CCDC180Q9P1Z9 1646 aa10.22□□□□□ -0.77
CWC22-201ENST00000404136 PLPPR3Q6T4P5 718 aa10.18□□□□□ -0.78
CWC22-201ENST00000404136 ADRA2BP18089 450 aa10.18□□□□□ -0.78
CWC22-201ENST00000404136 RB1CC1Q8TDY2 1594 aa10.11□□□□□ -0.79
CWC22-201ENST00000404136 PABPN1Q86U42 306 aaKnown RBP eCLIP10.06□□□□□ -0.8
CWC22-201ENST00000404136 NACADO15069 1562 aa9.89□□□□□ -0.83
CWC22-201ENST00000404136 CECR2Q9BXF3 1484 aa9.89□□□□□ -0.83
CWC22-201ENST00000404136 DCAF8L2P0C7V8 631 aa9.82□□□□□ -0.84
CWC22-201ENST00000404136 CC2D2AQ9P2K1 1620 aa9.75□□□□□ -0.85
CWC22-201ENST00000404136 TRIM41Q8WV44 630 aa9.73□□□□□ -0.85
CWC22-201ENST00000404136 CUX2O14529 1486 aa9.69□□□□□ -0.86
CWC22-201ENST00000404136 BICRAQ9NZM4 1560 aa9.69□□□□□ -0.86
CWC22-201ENST00000404136 SHROOM4Q9ULL8 1493 aa9.67□□□□□ -0.86
CWC22-201ENST00000404136 UNC13AQ9UPW8 1703 aa9.66□□□□□ -0.86
CWC22-201ENST00000404136 EIF4G1Q04637 1599 aaKnown RBP9.58□□□□□ -0.88
CWC22-201ENST00000404136 MYO15BQ96JP2 1530 aa9.54□□□□□ -0.88
CWC22-201ENST00000404136 ERCC6Q03468 1493 aa9.51□□□□□ -0.89
CWC22-201ENST00000404136 MAPK8IP2Q13387 824 aaPredicted RBP9.43□□□□□ -0.9
CWC22-201ENST00000404136 SCRIBQ14160 1630 aa9.31□□□□□ -0.92
CWC22-201ENST00000404136 OSCARQ8IYS5 282 aa9.24□□□□□ -0.93
CWC22-201ENST00000404136 DMRT2Q9Y5R5 561 aa9.24□□□□□ -0.93
CWC22-201ENST00000404136 TRHP20396 242 aaPredicted RBP9.19□□□□□ -0.94
CWC22-201ENST00000404136 DCAF1Q9Y4B6 1507 aa9.17□□□□□ -0.94
CWC22-201ENST00000404136 SCAF1Q9H7N4 1312 aaKnown RBP9.14□□□□□ -0.95
CWC22-201ENST00000404136 NCAPD3P42695 1498 aa9.14□□□□□ -0.95
CWC22-201ENST00000404136 THOC2Q8NI27 1593 aaKnown RBP9.1□□□□□ -0.95
CWC22-201ENST00000404136 NESP48681 1621 aa9.09□□□□□ -0.95
CWC22-201ENST00000404136 PDS5BQ9NTI5 1447 aa9.08□□□□□ -0.96
CWC22-201ENST00000404136 BAZ1AQ9NRL2 1556 aaPredicted RBP9.05□□□□□ -0.96
CWC22-201ENST00000404136 SMARCA2P51531 1590 aa9.04□□□□□ -0.96
CWC22-201ENST00000404136 ZCCHC6Q5VYS8 1495 aaKnown RBP9.04□□□□□ -0.96
CWC22-201ENST00000404136 ILDR1Q86SU0 546 aaPredicted RBP9.03□□□□□ -0.96
CWC22-201ENST00000404136 CYB5RLQ6IPT4 315 aa9.02□□□□□ -0.96
CWC22-201ENST00000404136 LAMC3Q9Y6N6 1575 aa9.02□□□□□ -0.97
CWC22-201ENST00000404136 DCAF8L1A6NGE4 600 aa9.01□□□□□ -0.97
CWC22-201ENST00000404136 RIMBP3CA6NJZ7 1639 aa8.99□□□□□ -0.97
CWC22-201ENST00000404136 RIMBP3BA6NNM3 1639 aa8.99□□□□□ -0.97
CWC22-201ENST00000404136 RIMBP3Q9UFD9 1639 aa8.99□□□□□ -0.97
CWC22-201ENST00000404136 CACNB1Q02641 598 aaPredicted RBP8.98□□□□□ -0.97
CWC22-201ENST00000404136 ATAD2BQ9ULI0 1458 aa8.98□□□□□ -0.97
CWC22-201ENST00000404136 SLC24A1O60721 1099 aa8.97□□□□□ -0.97
CWC22-201ENST00000404136 HMGXB3Q12766 1538 aa8.96□□□□□ -0.97
CWC22-201ENST00000404136 MRC2Q9UBG0 1479 aa8.95□□□□□ -0.98
CWC22-201ENST00000404136 PPP4R3CPQ6ZMV5 832 aa8.94□□□□□ -0.98
CWC22-201ENST00000404136 ARHGEF11O15085 1522 aa8.93□□□□□ -0.98
CWC22-201ENST00000404136 KIF21AQ7Z4S6 1674 aa8.91□□□□□ -0.98
CWC22-201ENST00000404136 WDR62O43379 1518 aa8.9□□□□□ -0.98
CWC22-201ENST00000404136 BAZ1BQ9UIG0 1483 aaKnown RBP8.89□□□□□ -0.99
CWC22-201ENST00000404136 CADPSQ9ULU8 1353 aa8.86□□□□□ -0.99
CWC22-201ENST00000404136 HOXD11P31277 338 aaPredicted RBP8.82□□□□□ -1
CWC22-201ENST00000404136 EHMT2Q96KQ7 1210 aa8.81□□□□□ -1
CWC22-201ENST00000404136 CEP164Q9UPV0 1460 aa8.8□□□□□ -1
CWC22-201ENST00000404136 RNF39Q9H2S5 420 aa8.78□□□□□ -1
CWC22-201ENST00000404136 ARAP1Q96P48 1450 aa8.78□□□□□ -1
CWC22-201ENST00000404136 SMARCA4P51532 1647 aa8.76□□□□□ -1.01
CWC22-201ENST00000404136 CNKSR2Q8WXI2 1034 aa8.76□□□□□ -1.01
CWC22-201ENST00000404136 RSF1Q96T23 1441 aaPredicted RBP8.76□□□□□ -1.01
CWC22-201ENST00000404136 FANCD2Q9BXW9 1451 aa8.71□□□□□ -1.01
CWC22-201ENST00000404136 RNF216Q9NWF9 866 aaPredicted RBP8.71□□□□□ -1.01
CWC22-201ENST00000404136 FBLN2P98095 1184 aa8.7□□□□□ -1.02
CWC22-201ENST00000404136 PEG3Q9GZU2 1588 aa8.69□□□□□ -1.02
CWC22-201ENST00000404136 IFT140Q96RY7 1462 aa8.67□□□□□ -1.02
CWC22-201ENST00000404136 FBXO41Q8TF61 875 aa8.65□□□□□ -1.02
CWC22-201ENST00000404136 URB2Q14146 1524 aaKnown RBP8.61□□□□□ -1.03
CWC22-201ENST00000404136 KDM4FA0A1W2PPD8 638 aa8.61□□□□□ -1.03
CWC22-201ENST00000404136 ZNF608Q9ULD9 1512 aaPredicted RBP8.6□□□□□ -1.03
CWC22-201ENST00000404136 C1QBPQ07021 282 aaKnown RBP8.59□□□□□ -1.03
CWC22-201ENST00000404136 LMTK3Q96Q04 1460 aa8.58□□□□□ -1.04
CWC22-201ENST00000404136 CFTRP13569 1480 aa8.57□□□□□ -1.04
CWC22-201ENST00000404136 SOCS7O14512 581 aa8.57□□□□□ -1.04
CWC22-201ENST00000404136 CHMP7Q8WUX9 453 aaPredicted RBP8.56□□□□□ -1.04
CWC22-201ENST00000404136 ERCC6L2Q5T890 1561 aa8.55□□□□□ -1.04
CWC22-201ENST00000404136 CHD1O14646 1710 aa8.54□□□□□ -1.04
CWC22-201ENST00000404136 ABCC8Q09428 1581 aa8.53□□□□□ -1.04
CWC22-201ENST00000404136 MROH2BQ7Z745 1585 aa8.52□□□□□ -1.05
CWC22-201ENST00000404136 GAPVD1Q14C86 1478 aa8.52□□□□□ -1.05
CWC22-201ENST00000404136 EIF4G3O43432 1585 aaKnown RBP8.51□□□□□ -1.05
CWC22-201ENST00000404136 SYNJ1O43426 1573 aa8.5□□□□□ -1.05
CWC22-201ENST00000404136 AQRO60306 1485 aaKnown RBP eCLIP8.5□□□□□ -1.058e-7■■■□□ 14.6
CWC22-201ENST00000404136 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.48□□□□□ -1.051e-6■■□□□ 12.8
CWC22-201ENST00000404136 NPM1P06748 294 aaKnown RBP eCLIP8.47□□□□□ -1.05
CWC22-201ENST00000404136 CLASP1Q7Z460 1538 aa8.47□□□□□ -1.05
CWC22-201ENST00000404136 FAM69CQ0P6D2 419 aa8.47□□□□□ -1.05
CWC22-201ENST00000404136 NCBP3Q53F19 620 aaKnown RBP8.46□□□□□ -1.06
CWC22-201ENST00000404136 NPM3O75607 178 aaKnown RBP8.45□□□□□ -1.06
CWC22-201ENST00000404136 TOPBP1Q92547 1522 aa8.45□□□□□ -1.06
CWC22-201ENST00000404136 HECW2Q9P2P5 1572 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms