RNA–Protein interactions for RNA: ENST00000592844.5

ZNF235-206, Transcript of zinc finger protein 235, humanhuman

TSL 2

Gene ZNF235, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF235-206ENST00000592844 AEBP2Q6ZN18 517 aaPredicted RBP13.3□□□□□ -0.28
ZNF235-206ENST00000592844 NISCHQ9Y2I1 1504 aa12.82□□□□□ -0.36
ZNF235-206ENST00000592844 CHIC1Q5VXU3 224 aa12.68□□□□□ -0.38
ZNF235-206ENST00000592844 ABCC9O60706 1549 aa11.69□□□□□ -0.54
ZNF235-206ENST00000592844 SENP3Q9H4L4 574 aaPredicted RBP11.44□□□□□ -0.58
ZNF235-206ENST00000592844 CCDC180Q9P1Z9 1646 aa11.41□□□□□ -0.58
ZNF235-206ENST00000592844 DNAJC5BQ9UF47 199 aa11.23□□□□□ -0.61
ZNF235-206ENST00000592844 PHF23Q9BUL5 403 aaPredicted RBP11.22□□□□□ -0.61
ZNF235-206ENST00000592844 DCAF8L2P0C7V8 631 aa11.01□□□□□ -0.65
ZNF235-206ENST00000592844 RB1CC1Q8TDY2 1594 aa11.01□□□□□ -0.65
ZNF235-206ENST00000592844 PABPN1Q86U42 306 aaKnown RBP eCLIP10.97□□□□□ -0.65
ZNF235-206ENST00000592844 NACADO15069 1562 aa10.93□□□□□ -0.66
ZNF235-206ENST00000592844 MYO15BQ96JP2 1530 aa10.77□□□□□ -0.69
ZNF235-206ENST00000592844 BICRAQ9NZM4 1560 aa10.71□□□□□ -0.69
ZNF235-206ENST00000592844 UNC13AQ9UPW8 1703 aa10.61□□□□□ -0.71
ZNF235-206ENST00000592844 FOXD1Q16676 465 aa10.61□□□□□ -0.71
ZNF235-206ENST00000592844 DCAF1Q9Y4B6 1507 aa10.58□□□□□ -0.72
ZNF235-206ENST00000592844 ZCCHC6Q5VYS8 1495 aaKnown RBP10.56□□□□□ -0.72
ZNF235-206ENST00000592844 CECR2Q9BXF3 1484 aa10.55□□□□□ -0.72
ZNF235-206ENST00000592844 SHROOM4Q9ULL8 1493 aa10.55□□□□□ -0.72
ZNF235-206ENST00000592844 CC2D2AQ9P2K1 1620 aa10.5□□□□□ -0.73
ZNF235-206ENST00000592844 EIF4G1Q04637 1599 aaKnown RBP10.45□□□□□ -0.74
ZNF235-206ENST00000592844 SCRIBQ14160 1630 aa10.44□□□□□ -0.74
ZNF235-206ENST00000592844 DNAJC5Q9H3Z4 198 aa10.41□□□□□ -0.74
ZNF235-206ENST00000592844 NCAPD3P42695 1498 aa10.18□□□□□ -0.78
ZNF235-206ENST00000592844 PLPPR3Q6T4P5 718 aa10.17□□□□□ -0.78
ZNF235-206ENST00000592844 CUX2O14529 1486 aa10.11□□□□□ -0.79
ZNF235-206ENST00000592844 ATAD2BQ9ULI0 1458 aa10.1□□□□□ -0.79
ZNF235-206ENST00000592844 ERCC6Q03468 1493 aa10.08□□□□□ -0.8
ZNF235-206ENST00000592844 MSH5O43196 834 aa10.05□□□□□ -0.8
ZNF235-206ENST00000592844 NESP48681 1621 aa10□□□□□ -0.81
ZNF235-206ENST00000592844 SMARCA2P51531 1590 aa9.99□□□□□ -0.81
ZNF235-206ENST00000592844 HMGXB3Q12766 1538 aa9.97□□□□□ -0.81
ZNF235-206ENST00000592844 SMARCA4P51532 1647 aa9.95□□□□□ -0.82
ZNF235-206ENST00000592844 BAZ1BQ9UIG0 1483 aaKnown RBP9.94□□□□□ -0.82
ZNF235-206ENST00000592844 POTEDQ86YR6 584 aa9.93□□□□□ -0.82
ZNF235-206ENST00000592844 PIAS4Q8N2W9 510 aaPredicted RBP9.93□□□□□ -0.82
ZNF235-206ENST00000592844 ADRA2BP18089 450 aa9.92□□□□□ -0.82
ZNF235-206ENST00000592844 PPP6R1Q9UPN7 881 aa9.92□□□□□ -0.82
ZNF235-206ENST00000592844 BAZ1AQ9NRL2 1556 aaPredicted RBP9.92□□□□□ -0.82
ZNF235-206ENST00000592844 PDS5BQ9NTI5 1447 aa9.9□□□□□ -0.82
ZNF235-206ENST00000592844 PEG3Q9GZU2 1588 aa9.89□□□□□ -0.83
ZNF235-206ENST00000592844 MROH2BQ7Z745 1585 aa9.88□□□□□ -0.83
ZNF235-206ENST00000592844 CADPSQ9ULU8 1353 aa9.88□□□□□ -0.83
ZNF235-206ENST00000592844 LAMC3Q9Y6N6 1575 aa9.86□□□□□ -0.83
ZNF235-206ENST00000592844 TRIM41Q8WV44 630 aa9.83□□□□□ -0.84
ZNF235-206ENST00000592844 THOC2Q8NI27 1593 aaKnown RBP9.83□□□□□ -0.84
ZNF235-206ENST00000592844 OSCARQ8IYS5 282 aa9.76□□□□□ -0.85
ZNF235-206ENST00000592844 MRC2Q9UBG0 1479 aa9.76□□□□□ -0.85
ZNF235-206ENST00000592844 KIF21AQ7Z4S6 1674 aa9.72□□□□□ -0.85
ZNF235-206ENST00000592844 WDR62O43379 1518 aa9.72□□□□□ -0.85
ZNF235-206ENST00000592844 CFTRP13569 1480 aa9.7□□□□□ -0.86
ZNF235-206ENST00000592844 FANCD2Q9BXW9 1451 aa9.7□□□□□ -0.86
ZNF235-206ENST00000592844 CEP164Q9UPV0 1460 aa9.69□□□□□ -0.86
ZNF235-206ENST00000592844 WIZO95785 1651 aa9.68□□□□□ -0.86
ZNF235-206ENST00000592844 RSF1Q96T23 1441 aaPredicted RBP9.68□□□□□ -0.86
ZNF235-206ENST00000592844 URB2Q14146 1524 aaKnown RBP9.61□□□□□ -0.87
ZNF235-206ENST00000592844 TOP2AP11388 1531 aaKnown RBP9.56□□□□□ -0.88
ZNF235-206ENST00000592844 CCDC88BA6NC98 1476 aa9.54□□□□□ -0.88
ZNF235-206ENST00000592844 CYB5RLQ6IPT4 315 aa9.54□□□□□ -0.88
ZNF235-206ENST00000592844 ZNF608Q9ULD9 1512 aaPredicted RBP9.54□□□□□ -0.88
ZNF235-206ENST00000592844 IFT140Q96RY7 1462 aa9.53□□□□□ -0.88
ZNF235-206ENST00000592844 TOPBP1Q92547 1522 aa9.48□□□□□ -0.89
ZNF235-206ENST00000592844 ABCC8Q09428 1581 aa9.48□□□□□ -0.89
ZNF235-206ENST00000592844 AQRO60306 1485 aaKnown RBP eCLIP9.47□□□□□ -0.89
ZNF235-206ENST00000592844 FBLN2P98095 1184 aa9.47□□□□□ -0.89
ZNF235-206ENST00000592844 ARHGEF11O15085 1522 aa9.46□□□□□ -0.89
ZNF235-206ENST00000592844 RIMBP3CA6NJZ7 1639 aa9.45□□□□□ -0.9
ZNF235-206ENST00000592844 RIMBP3BA6NNM3 1639 aa9.45□□□□□ -0.9
ZNF235-206ENST00000592844 RIMBP3Q9UFD9 1639 aa9.45□□□□□ -0.9
ZNF235-206ENST00000592844 TRHP20396 242 aaPredicted RBP9.44□□□□□ -0.9
ZNF235-206ENST00000592844 TDRD9Q8NDG6 1382 aaKnown RBP9.42□□□□□ -0.9
ZNF235-206ENST00000592844 SOGA1O94964 1423 aa9.41□□□□□ -0.9
ZNF235-206ENST00000592844 DNMBPQ6XZF7 1577 aa9.39□□□□□ -0.91
ZNF235-206ENST00000592844 CHMP7Q8WUX9 453 aaPredicted RBP9.39□□□□□ -0.91
ZNF235-206ENST00000592844 POLA1P09884 1462 aaPredicted RBP9.39□□□□□ -0.91
ZNF235-206ENST00000592844 RAD54L2Q9Y4B4 1467 aa9.39□□□□□ -0.91
ZNF235-206ENST00000592844 ARAP1Q96P48 1450 aa9.37□□□□□ -0.91
ZNF235-206ENST00000592844 TARBP1Q13395 1621 aaKnown RBP9.37□□□□□ -0.91
ZNF235-206ENST00000592844 EIF4G3O43432 1585 aaKnown RBP9.36□□□□□ -0.91
ZNF235-206ENST00000592844 PRDM2Q13029 1718 aa9.32□□□□□ -0.92
ZNF235-206ENST00000592844 SNAPC4Q5SXM2 1469 aa9.3□□□□□ -0.92
ZNF235-206ENST00000592844 GRIN2BQ13224 1484 aa9.29□□□□□ -0.92
ZNF235-206ENST00000592844 FGD5Q6ZNL6 1462 aa9.29□□□□□ -0.92
ZNF235-206ENST00000592844 MAGI1Q96QZ7 1491 aaPredicted RBP9.28□□□□□ -0.92
ZNF235-206ENST00000592844 SYNJ2O15056 1496 aa9.27□□□□□ -0.93
ZNF235-206ENST00000592844 CUX1P39880 1505 aa9.26□□□□□ -0.93
ZNF235-206ENST00000592844 CLASP1Q7Z460 1538 aa9.26□□□□□ -0.93
ZNF235-206ENST00000592844 CHD1O14646 1710 aa9.26□□□□□ -0.93
ZNF235-206ENST00000592844 GAPVD1Q14C86 1478 aa9.24□□□□□ -0.93
ZNF235-206ENST00000592844 WDR97A6NE52 1622 aa9.23□□□□□ -0.93
ZNF235-206ENST00000592844 SYNJ1O43426 1573 aa9.22□□□□□ -0.93
ZNF235-206ENST00000592844 SUPT5HO00267 1087 aaKnown RBP9.2□□□□□ -0.94
ZNF235-206ENST00000592844 ABCA10Q8WWZ4 1543 aa9.2□□□□□ -0.94
ZNF235-206ENST00000592844 WRNQ14191 1432 aaPredicted RBP eCLIP9.18□□□□□ -0.94
ZNF235-206ENST00000592844 JPH4Q96JJ6 628 aa9.17□□□□□ -0.94
ZNF235-206ENST00000592844 NUP160Q12769 1436 aa9.15□□□□□ -0.94
ZNF235-206ENST00000592844 GRIN2AQ12879 1464 aa9.15□□□□□ -0.95
ZNF235-206ENST00000592844 FHAD1B1AJZ9 1412 aa9.14□□□□□ -0.95
ZNF235-206ENST00000592844 ERCC6L2Q5T890 1561 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms