RNA–Protein interactions for RNA: ENST00000584919.1

LINC01909-202, Transcript of long intergenic non-protein coding RNA 1909, humanhuman

TSL 3 BASIC

Gene LINC01909, Length 815 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01909-202ENST00000584919 AEBP2Q6ZN18 517 aaPredicted RBP26.82■■□□□ 1.88
LINC01909-202ENST00000584919 CHIC1Q5VXU3 224 aa25.04■■□□□ 1.6
LINC01909-202ENST00000584919 SENP3Q9H4L4 574 aaPredicted RBP22.96■■□□□ 1.27
LINC01909-202ENST00000584919 PHF23Q9BUL5 403 aaPredicted RBP22.59■■□□□ 1.21
LINC01909-202ENST00000584919 FOXD1Q16676 465 aa21.51■■□□□ 1.03
LINC01909-202ENST00000584919 POTEDQ86YR6 584 aa21.08■□□□□ 0.97
LINC01909-202ENST00000584919 MSH5O43196 834 aa20.36■□□□□ 0.85
LINC01909-202ENST00000584919 PIAS4Q8N2W9 510 aaPredicted RBP19.97■□□□□ 0.79
LINC01909-202ENST00000584919 PPP6R1Q9UPN7 881 aa19.6■□□□□ 0.73
LINC01909-202ENST00000584919 ADRA2BP18089 450 aa19.52■□□□□ 0.72
LINC01909-202ENST00000584919 PLPPR3Q6T4P5 718 aa19.49■□□□□ 0.71
LINC01909-202ENST00000584919 MAPK8IP2Q13387 824 aaPredicted RBP18.15■□□□□ 0.5
LINC01909-202ENST00000584919 DMRT2Q9Y5R5 561 aa18.09■□□□□ 0.49
LINC01909-202ENST00000584919 CACNB1Q02641 598 aaPredicted RBP17.96■□□□□ 0.47
LINC01909-202ENST00000584919 SCAF1Q9H7N4 1312 aaKnown RBP17.8■□□□□ 0.44
LINC01909-202ENST00000584919 DCAF8L1A6NGE4 600 aa17.53■□□□□ 0.4
LINC01909-202ENST00000584919 RNF39Q9H2S5 420 aa17.31■□□□□ 0.36
LINC01909-202ENST00000584919 HOXD11P31277 338 aaPredicted RBP17.13■□□□□ 0.33
LINC01909-202ENST00000584919 PPP4R3CPQ6ZMV5 832 aa17.02■□□□□ 0.32
LINC01909-202ENST00000584919 C1QBPQ07021 282 aaKnown RBP17■□□□□ 0.31
LINC01909-202ENST00000584919 CNKSR2Q8WXI2 1034 aa16.83■□□□□ 0.28
LINC01909-202ENST00000584919 RNF216Q9NWF9 866 aaPredicted RBP16.83■□□□□ 0.28
LINC01909-202ENST00000584919 DNAJC5BQ9UF47 199 aa16.58■□□□□ 0.24
LINC01909-202ENST00000584919 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.42■□□□□ 0.22
LINC01909-202ENST00000584919 POTEHQ6S545 545 aa16.39■□□□□ 0.21
LINC01909-202ENST00000584919 NCBP3Q53F19 620 aaKnown RBP16.13■□□□□ 0.17
LINC01909-202ENST00000584919 CAPN15O75808 1086 aa16■□□□□ 0.15
LINC01909-202ENST00000584919 DSG3P32926 999 aa16■□□□□ 0.15
LINC01909-202ENST00000584919 SPINK5Q9NQ38 1064 aaPredicted RBP15.97■□□□□ 0.15
LINC01909-202ENST00000584919 U3KPZ7 1027 aaPredicted RBP15.96■□□□□ 0.15
LINC01909-202ENST00000584919 NPM3O75607 178 aaKnown RBP15.92■□□□□ 0.14
LINC01909-202ENST00000584919 ABCB7O75027 752 aa15.59■□□□□ 0.09
LINC01909-202ENST00000584919 TRHP20396 242 aaPredicted RBP15.59■□□□□ 0.09
LINC01909-202ENST00000584919 ZNF219Q9P2Y4 722 aaPredicted RBP15.45■□□□□ 0.06
LINC01909-202ENST00000584919 APLP2Q06481 763 aa15.4■□□□□ 0.06
LINC01909-202ENST00000584919 SLC4A2P04920 1241 aa15.37■□□□□ 0.05
LINC01909-202ENST00000584919 RBM42Q9BTD8 480 aaKnown RBP15.27■□□□□ 0.04
LINC01909-202ENST00000584919 CHRDL2Q6WN34 429 aa15.24■□□□□ 0.03
LINC01909-202ENST00000584919 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.22■□□□□ 0.03
LINC01909-202ENST00000584919 HNRNPUL2Q1KMD3 747 aaKnown RBP15.22■□□□□ 0.03
LINC01909-202ENST00000584919 SAMD1Q6SPF0 538 aaPredicted RBP15.12■□□□□ 0.01
LINC01909-202ENST00000584919 KCNA4P22459 653 aa15.04■□□□□ -0
LINC01909-202ENST00000584919 SP7Q8TDD2 431 aaPredicted RBP15.03■□□□□ -0
LINC01909-202ENST00000584919 POLA2Q14181 598 aa14.97□□□□□ -0.01
LINC01909-202ENST00000584919 AKT1S1Q96B36 256 aa14.77□□□□□ -0.05
LINC01909-202ENST00000584919 MYCNP04198 464 aaPredicted RBP14.73□□□□□ -0.05
LINC01909-202ENST00000584919 PIP4P2Q8N4L2 257 aa14.73□□□□□ -0.05
LINC01909-202ENST00000584919 HAX1O00165 279 aa14.7□□□□□ -0.06
LINC01909-202ENST00000584919 REM2Q8IYK8 340 aaPredicted RBP14.66□□□□□ -0.06
LINC01909-202ENST00000584919 ZBTB12Q9Y330 459 aaPredicted RBP14.55□□□□□ -0.08
LINC01909-202ENST00000584919 OSCARQ8IYS5 282 aa14.54□□□□□ -0.08
LINC01909-202ENST00000584919 PITPNM1O00562 1244 aa14.53□□□□□ -0.08
LINC01909-202ENST00000584919 FXR2P51116 673 aaKnown RBP eCLIP14.49□□□□□ -0.09
LINC01909-202ENST00000584919 ATF5Q9Y2D1 282 aaPredicted RBP14.49□□□□□ -0.09
LINC01909-202ENST00000584919 EVX2Q03828 476 aa14.44□□□□□ -0.1
LINC01909-202ENST00000584919 FOXD4L1Q9NU39 408 aa14.21□□□□□ -0.13
LINC01909-202ENST00000584919 PRKAR2AP13861 404 aaKnown RBP14.16□□□□□ -0.14
LINC01909-202ENST00000584919 LHX8Q68G74 356 aa14.1□□□□□ -0.15
LINC01909-202ENST00000584919 CLEC11AQ9Y240 323 aa14.1□□□□□ -0.15
LINC01909-202ENST00000584919 C19orf67A6NJJ6 358 aa14.06□□□□□ -0.16
LINC01909-202ENST00000584919 GABBR2O75899 941 aa14.06□□□□□ -0.16
LINC01909-202ENST00000584919 SLC4A1APQ9BWU0 796 aaKnown RBP14.06□□□□□ -0.16
LINC01909-202ENST00000584919 SPDYE2BA6NHP3 402 aa14.05□□□□□ -0.16
LINC01909-202ENST00000584919 SPDYE6P0CI01 402 aa14.05□□□□□ -0.16
LINC01909-202ENST00000584919 SPDYE2Q495Y8 402 aa14.05□□□□□ -0.16
LINC01909-202ENST00000584919 SPDYE1Q8NFV5 336 aaPredicted RBP14□□□□□ -0.17
LINC01909-202ENST00000584919 FBLN2P98095 1184 aa13.95□□□□□ -0.18
LINC01909-202ENST00000584919 CHADLQ6NUI6 762 aa13.89□□□□□ -0.19
LINC01909-202ENST00000584919 PLSCR2Q9NRY7 297 aa13.87□□□□□ -0.19
LINC01909-202ENST00000584919 ZNF692Q9BU19 519 aaPredicted RBP13.83□□□□□ -0.2
LINC01909-202ENST00000584919 ZBTB22O15209 634 aa13.8□□□□□ -0.2
LINC01909-202ENST00000584919 ATXN8OSP0DMR3 200 aa13.78□□□□□ -0.2
LINC01909-202ENST00000584919 SSUH2Q9Y2M2 353 aa13.78□□□□□ -0.2
LINC01909-202ENST00000584919 MKRN4PQ13434 485 aaPredicted RBP13.76□□□□□ -0.21
LINC01909-202ENST00000584919 POTEIP0CG38 1075 aa13.75□□□□□ -0.21
LINC01909-202ENST00000584919 PRR29P0C7W0 189 aa13.72□□□□□ -0.21
LINC01909-202ENST00000584919 CD44P16070 742 aaKnown RBP13.68□□□□□ -0.22
LINC01909-202ENST00000584919 PABPN1Q86U42 306 aaKnown RBP eCLIP13.61□□□□□ -0.23
LINC01909-202ENST00000584919 DCBLD2Q96PD2 775 aa13.57□□□□□ -0.24
LINC01909-202ENST00000584919 FARP1Q9Y4F1 1045 aaPredicted RBP13.56□□□□□ -0.24
LINC01909-202ENST00000584919 CLCN6P51797 869 aa13.49□□□□□ -0.25
LINC01909-202ENST00000584919 ZRANB1Q9UGI0 708 aa13.38□□□□□ -0.27
LINC01909-202ENST00000584919 ZNF579Q8NAF0 562 aaKnown RBP13.37□□□□□ -0.27
LINC01909-202ENST00000584919 OTUD5Q96G74 571 aa13.37□□□□□ -0.27
LINC01909-202ENST00000584919 POTEMA6NI47 508 aa13.33□□□□□ -0.28
LINC01909-202ENST00000584919 GALR2O43603 387 aaPredicted RBP13.32□□□□□ -0.28
LINC01909-202ENST00000584919 POTEB2H3BUK9 544 aa13.29□□□□□ -0.28
LINC01909-202ENST00000584919 POTEGQ6S5H5 508 aa13.27□□□□□ -0.29
LINC01909-202ENST00000584919 CREBZFQ9NS37 354 aa13.19□□□□□ -0.3
LINC01909-202ENST00000584919 PHF12Q96QT6 1004 aa13.15□□□□□ -0.3
LINC01909-202ENST00000584919 PAK3O75914 559 aaPredicted RBP13.11□□□□□ -0.31
LINC01909-202ENST00000584919 PELP1Q8IZL8 1130 aaKnown RBP13.11□□□□□ -0.31
LINC01909-202ENST00000584919 PCDH10Q9P2E7 1040 aa13.05□□□□□ -0.32
LINC01909-202ENST00000584919 STAG3Q9UJ98 1225 aa13.03□□□□□ -0.32
LINC01909-202ENST00000584919 METRNQ9UJH8 293 aa13.02□□□□□ -0.33
LINC01909-202ENST00000584919 POTEJP0CG39 1038 aa12.98□□□□□ -0.33
LINC01909-202ENST00000584919 FAM163AQ96GL9 167 aaPredicted RBP12.95□□□□□ -0.34
LINC01909-202ENST00000584919 SLC39A7Q92504 469 aa12.94□□□□□ -0.34
LINC01909-202ENST00000584919 MS4A3Q96HJ5 214 aa12.94□□□□□ -0.34
LINC01909-202ENST00000584919 C7P10643 843 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 246.3 ms