RNA–Protein interactions for RNA: YOL094C

RFC4, Transcript of Subunit of heteropentameric Replication factor C (RF-C), yeastyeast

Gene RFC4, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFC4YOL094C MTC1P47018 478 aaKnown RBP15.37■□□□□ 0.05
RFC4YOL094C DRS1P32892 752 aaKnown RBP14.39□□□□□ -0.11
RFC4YOL094C FAP1P53971 965 aa14.22□□□□□ -0.13
RFC4YOL094C PRY3P47033 881 aa13.36□□□□□ -0.27
RFC4YOL094C PRI1P10363 409 aa13.19□□□□□ -0.3
RFC4YOL094C AAD16Q02895 342 aa13.17□□□□□ -0.3
RFC4YOL094C ISW2Q08773 1120 aa12.87□□□□□ -0.35
RFC4YOL094C RPG1P38249 964 aaKnown RBP12.66□□□□□ -0.38
RFC4YOL094C HAA1Q12753 694 aaKnown RBP12.65□□□□□ -0.38
RFC4YOL094C BFR2Q06631 534 aaKnown RBP12.62□□□□□ -0.39
RFC4YOL094C YCK3P39962 524 aa12.58□□□□□ -0.4
RFC4YOL094C TSR3Q12094 313 aaKnown RBP12.35□□□□□ -0.43
RFC4YOL094C DIP2Q12220 943 aaPredicted RBP12.34□□□□□ -0.43
RFC4YOL094C RSE1Q04693 1361 aaKnown RBP12.08□□□□□ -0.48
RFC4YOL094C TFA1P36100 482 aa12.08□□□□□ -0.48
RFC4YOL094C AVT3P36062 692 aa12.01□□□□□ -0.49
RFC4YOL094C MRPL32P25348 183 aa11.97□□□□□ -0.49
RFC4YOL094C SGS1P35187 1447 aa11.74□□□□□ -0.53
RFC4YOL094C REB1P21538 810 aa11.68□□□□□ -0.54
RFC4YOL094C RPL17AP05740 184 aaKnown RBP11.67□□□□□ -0.54
RFC4YOL094C RPL17BP46990 184 aaKnown RBP11.67□□□□□ -0.54
RFC4YOL094C YGL015CP33199 130 aa11.63□□□□□ -0.55
RFC4YOL094C INO80P53115 1489 aa11.55□□□□□ -0.56
RFC4YOL094C TCB3Q03640 1545 aaKnown RBP11.43□□□□□ -0.58
RFC4YOL094C MON2P48563 1636 aaPredicted RBP11.3□□□□□ -0.6
RFC4YOL094C TY1B-DR4Q07793 1604 aa11.23□□□□□ -0.61
RFC4YOL094C CDC27P38042 758 aa11.22□□□□□ -0.61
RFC4YOL094C SPT21P35209 758 aa11.18□□□□□ -0.62
RFC4YOL094C SPA2P23201 1466 aaKnown RBP11.12□□□□□ -0.63
RFC4YOL094C SSN2P38931 1420 aa11.11□□□□□ -0.63
RFC4YOL094C YKR023WP36119 530 aaKnown RBP11.11□□□□□ -0.63
RFC4YOL094C UBP10P53874 792 aaPredicted RBP11.1□□□□□ -0.63
RFC4YOL094C SWR1Q05471 1514 aa11.04□□□□□ -0.64
RFC4YOL094C SPT6P23615 1451 aaKnown RBP11□□□□□ -0.65
RFC4YOL094C HSL1P34244 1518 aa10.99□□□□□ -0.65
RFC4YOL094C MAP2P38174 421 aaKnown RBP10.93□□□□□ -0.66
RFC4YOL094C TFC8Q12308 588 aa10.92□□□□□ -0.66
RFC4YOL094C HOP09932 586 aa10.83□□□□□ -0.68
RFC4YOL094C BUD31P25337 157 aaPredicted RBP10.83□□□□□ -0.68
RFC4YOL094C HIR3P47171 1648 aa10.8□□□□□ -0.68
RFC4YOL094C DNA2P38859 1522 aa10.79□□□□□ -0.68
RFC4YOL094C RQC2Q12532 1038 aaKnown RBP10.78□□□□□ -0.68
RFC4YOL094C KOG1P38873 1557 aa10.76□□□□□ -0.69
RFC4YOL094C DCD1P06773 312 aa10.75□□□□□ -0.69
RFC4YOL094C XRN1P22147 1528 aaKnown RBP10.74□□□□□ -0.69
RFC4YOL094C RIM101P33400 625 aa10.72□□□□□ -0.69
RFC4YOL094C TIF4632P39936 914 aaKnown RBP10.66□□□□□ -0.7
RFC4YOL094C SCY1P53009 804 aa10.65□□□□□ -0.7
RFC4YOL094C SLX5P32828 619 aaKnown RBP10.6□□□□□ -0.71
RFC4YOL094C TGL3P40308 642 aa10.6□□□□□ -0.71
RFC4YOL094C REV3P14284 1504 aa10.57□□□□□ -0.72
RFC4YOL094C BCH2P36122 765 aa10.52□□□□□ -0.73
RFC4YOL094C THO2P53552 1597 aaKnown RBP10.52□□□□□ -0.73
RFC4YOL094C BUD4P47136 1447 aa10.51□□□□□ -0.73
RFC4YOL094C ECM5Q03214 1411 aa10.51□□□□□ -0.73
RFC4YOL094C SIN3P22579 1536 aa10.49□□□□□ -0.73
RFC4YOL094C TAF2P23255 1407 aa10.45□□□□□ -0.74
RFC4YOL094C UBP9P39967 754 aa10.43□□□□□ -0.74
RFC4YOL094C SSK2P53599 1579 aa10.41□□□□□ -0.74
RFC4YOL094C SKI3P17883 1432 aaKnown RBP10.33□□□□□ -0.76
RFC4YOL094C ESP1Q03018 1630 aa10.33□□□□□ -0.76
RFC4YOL094C PTP3P40048 928 aa10.33□□□□□ -0.76
RFC4YOL094C ATG2P53855 1592 aa10.33□□□□□ -0.76
RFC4YOL094C MYO2P19524 1574 aaKnown RBP10.31□□□□□ -0.76
RFC4YOL094C MDS3P53094 1487 aa10.3□□□□□ -0.76
RFC4YOL094C OXP1P28273 1286 aa10.28□□□□□ -0.76
RFC4YOL094C PEP1P32319 1579 aa10.27□□□□□ -0.76
RFC4YOL094C SIS1P25294 352 aaKnown RBP10.24□□□□□ -0.77
RFC4YOL094C EPS1P40557 701 aa10.23□□□□□ -0.77
RFC4YOL094C YPK9Q12697 1472 aa10.22□□□□□ -0.77
RFC4YOL094C BDF1P35817 686 aa10.2□□□□□ -0.78
RFC4YOL094C YIL055CP40523 627 aaKnown RBP10.18□□□□□ -0.78
RFC4YOL094C SSP1P38871 571 aa10.17□□□□□ -0.78
RFC4YOL094C POL1P13382 1468 aa10.13□□□□□ -0.79
RFC4YOL094C MST1P07236 462 aa10.13□□□□□ -0.79
RFC4YOL094C SCC2Q04002 1493 aa10.12□□□□□ -0.79
RFC4YOL094C RPO31P04051 1460 aa10.1□□□□□ -0.79
RFC4YOL094C NSR1P27476 414 aaKnown RBP RIP-Chip data10.09□□□□□ -0.79not detected
RFC4YOL094C DMA1P38823 416 aa10.09□□□□□ -0.79
RFC4YOL094C UFD4P33202 1483 aa10.08□□□□□ -0.8
RFC4YOL094C STU1P38198 1513 aa10.07□□□□□ -0.8
RFC4YOL094C YTA7P40340 1379 aa10.06□□□□□ -0.8
RFC4YOL094C BBC1P47068 1157 aa10.06□□□□□ -0.8
RFC4YOL094C YOR238WQ08634 303 aa10.05□□□□□ -0.8
RFC4YOL094C YAH1Q12184 172 aaKnown RBP10.05□□□□□ -0.8
RFC4YOL094C RSM7P47150 247 aa10.04□□□□□ -0.8
RFC4YOL094C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.03□□□□□ -0.8not detected
RFC4YOL094C RKR1Q04781 1562 aa10.02□□□□□ -0.81
RFC4YOL094C TOP2P06786 1428 aaKnown RBP10.02□□□□□ -0.81
RFC4YOL094C BPT1P14772 1559 aa10.01□□□□□ -0.81
RFC4YOL094C YOR1P53049 1477 aa9.99□□□□□ -0.81
RFC4YOL094C CHD1P32657 1468 aa9.98□□□□□ -0.81
RFC4YOL094C YCF1P39109 1515 aaKnown RBP9.98□□□□□ -0.81
RFC4YOL094C SMC4Q12267 1418 aa9.97□□□□□ -0.81
RFC4YOL094C AI2P03876 854 aa9.95□□□□□ -0.82
RFC4YOL094C YAP5P40574 245 aa9.93□□□□□ -0.82
RFC4YOL094C YBL029C-AQ3E756 94 aa9.91□□□□□ -0.82
RFC4YOL094C TY2B-LR1P0C2J3 1770 aa9.91□□□□□ -0.82
RFC4YOL094C TY2B-FP0CX63 1770 aa9.91□□□□□ -0.82
RFC4YOL094C TY2B-GR2P0CX64 1770 aa9.91□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms