RNA–Protein interactions for RNA: YPL181W

CTI6, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene CTI6, Length 1,521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTI6YPL181W IXR1P33417 597 aa10.19□□□□□ -0.78
CTI6YPL181W MCD4P36051 919 aa10.19□□□□□ -0.78
CTI6YPL181W SSP1P38871 571 aa10.19□□□□□ -0.78
CTI6YPL181W UBP9P39967 754 aa10.19□□□□□ -0.78
CTI6YPL181W SPO22P40511 975 aa10.19□□□□□ -0.78
CTI6YPL181W SPR3P41901 512 aa10.19□□□□□ -0.78
CTI6YPL181W KRI1P42846 591 aaKnown RBP10.19□□□□□ -0.78
CTI6YPL181W FOL1P53848 824 aa10.19□□□□□ -0.78
CTI6YPL181W VPS30Q02948 557 aa10.19□□□□□ -0.78
CTI6YPL181W MYO5Q04439 1219 aaKnown RBP10.19□□□□□ -0.78
CTI6YPL181W RPL8BP29453 256 aaKnown RBP10.18□□□□□ -0.78
CTI6YPL181W YML037CQ03703 340 aa10.18□□□□□ -0.78
CTI6YPL181W CFT2Q12102 859 aaPredicted RBP10.18□□□□□ -0.78
CTI6YPL181W PES4P39684 611 aa10.17□□□□□ -0.78
CTI6YPL181W CSM2P40465 213 aa10.17□□□□□ -0.78
CTI6YPL181W VID28P40547 921 aa10.17□□□□□ -0.78
CTI6YPL181W SOL4P53315 255 aa10.17□□□□□ -0.78
CTI6YPL181W UBX5Q06682 500 aa10.17□□□□□ -0.78
CTI6YPL181W NUC1P08466 329 aa10.17□□□□□ -0.78
CTI6YPL181W PER1P25625 357 aa10.17□□□□□ -0.78
CTI6YPL181W ERG7P38604 731 aa10.17□□□□□ -0.78
CTI6YPL181W ECM23Q02710 187 aa10.17□□□□□ -0.78
CTI6YPL181W RIM101P33400 625 aa10.16□□□□□ -0.78
CTI6YPL181W ALG2P43636 503 aa10.16□□□□□ -0.78
CTI6YPL181W NCS6P53088 359 aa10.16□□□□□ -0.78
CTI6YPL181W VPS45P38932 577 aa10.15□□□□□ -0.78
CTI6YPL181W YLR225CQ05948 407 aaKnown RBP10.15□□□□□ -0.78
CTI6YPL181W SGD1Q06132 899 aa10.15□□□□□ -0.78
CTI6YPL181W CLF1Q12309 687 aaPredicted RBP10.15□□□□□ -0.78
CTI6YPL181W SRP54P20424 541 aaKnown RBP10.14□□□□□ -0.79
CTI6YPL181W CDC60P26637 1090 aaKnown RBP10.14□□□□□ -0.79
CTI6YPL181W FBP26P32604 452 aa10.14□□□□□ -0.79
CTI6YPL181W YOR111WQ99210 232 aa10.14□□□□□ -0.79
CTI6YPL181W RAD18P10862 487 aa10.13□□□□□ -0.79
CTI6YPL181W SIS2P36024 562 aa10.13□□□□□ -0.79
CTI6YPL181W MAL31P38156 614 aa10.12□□□□□ -0.79
CTI6YPL181W PHO88P38264 188 aaPredicted RBP10.12□□□□□ -0.79
CTI6YPL181W AKR1P39010 764 aa10.12□□□□□ -0.79
CTI6YPL181W ARP5P53946 755 aa10.12□□□□□ -0.79
CTI6YPL181W SUE1Q06524 206 aa10.12□□□□□ -0.79
CTI6YPL181W UTP4Q06679 776 aaKnown RBP10.12□□□□□ -0.79
CTI6YPL181W RNR2P09938 399 aaKnown RBP10.12□□□□□ -0.79
CTI6YPL181W SRS2P12954 1174 aa10.12□□□□□ -0.79
CTI6YPL181W VMA2P16140 517 aaKnown RBP10.12□□□□□ -0.79
CTI6YPL181W DIT2P21595 489 aa10.12□□□□□ -0.79
CTI6YPL181W MDM1Q01846 1127 aa10.12□□□□□ -0.79
CTI6YPL181W DSE3Q08729 430 aa10.12□□□□□ -0.79
CTI6YPL181W TY3A-GQ12173 290 aa10.12□□□□□ -0.79
CTI6YPL181W TY3A-IQ99219 290 aa10.12□□□□□ -0.79
CTI6YPL181W MATALPHA2P0CY08 210 aa10.11□□□□□ -0.79
CTI6YPL181W HMLALPHA2P0CY09 210 aa10.11□□□□□ -0.79
CTI6YPL181W RNR3P21672 869 aaKnown RBP10.11□□□□□ -0.79
CTI6YPL181W ALD6P54115 500 aaKnown RBP10.11□□□□□ -0.79
CTI6YPL181W TSR3Q12094 313 aaKnown RBP10.11□□□□□ -0.79
CTI6YPL181W PKC1P24583 1151 aa10.1□□□□□ -0.79
CTI6YPL181W EUG1P32474 517 aa10.1□□□□□ -0.79
CTI6YPL181W GPB2P39717 880 aa10.1□□□□□ -0.79
CTI6YPL181W YKE2P52553 114 aa10.1□□□□□ -0.79
CTI6YPL181W ATG1P53104 897 aa10.1□□□□□ -0.79
CTI6YPL181W SAM1P10659 382 aaKnown RBP10.09□□□□□ -0.79
CTI6YPL181W EPL1P43572 832 aa10.09□□□□□ -0.79
CTI6YPL181W LSB1P53281 241 aa10.09□□□□□ -0.79
CTI6YPL181W TMA64Q04600 565 aaKnown RBP10.09□□□□□ -0.79
CTI6YPL181W UTR4P32626 227 aa10.08□□□□□ -0.8
CTI6YPL181W TGL1P34163 548 aa10.08□□□□□ -0.8
CTI6YPL181W TOM71P38825 639 aaKnown RBP10.08□□□□□ -0.8
CTI6YPL181W YIR014WP40570 242 aa10.08□□□□□ -0.8
CTI6YPL181W CSC1Q06538 782 aa10.08□□□□□ -0.8
CTI6YPL181W RLF2Q12495 606 aa10.08□□□□□ -0.8
CTI6YPL181W YKR018CP36114 725 aa10.07□□□□□ -0.8
CTI6YPL181W YDR341CQ05506 607 aaKnown RBP10.07□□□□□ -0.8
CTI6YPL181W HCA4P20448 770 aaKnown RBP10.07□□□□□ -0.8
CTI6YPL181W BMH2P34730 273 aaKnown RBP10.07□□□□□ -0.8
CTI6YPL181W OPY1P38271 328 aa10.07□□□□□ -0.8
CTI6YPL181W NDT80P38830 627 aa10.07□□□□□ -0.8
CTI6YPL181W YAF9P53930 226 aa10.07□□□□□ -0.8
CTI6YPL181W YLR407WQ06070 228 aa10.07□□□□□ -0.8
CTI6YPL181W SPH1Q06160 661 aa10.07□□□□□ -0.8
CTI6YPL181W CDC19P00549 500 aaKnown RBP10.06□□□□□ -0.8
CTI6YPL181W CIT1P00890 479 aa10.06□□□□□ -0.8
CTI6YPL181W MET6P05694 767 aaKnown RBP10.06□□□□□ -0.8
CTI6YPL181W STI1P15705 589 aaKnown RBP RIP-Chip data10.06□□□□□ -0.8not detected
CTI6YPL181W RPL8AP17076 256 aaKnown RBP10.06□□□□□ -0.8
CTI6YPL181W SWI4P25302 1093 aaKnown RBP10.06□□□□□ -0.8
CTI6YPL181W SHP1P34223 423 aa10.06□□□□□ -0.8
CTI6YPL181W CTF18P49956 741 aa10.06□□□□□ -0.8
CTI6YPL181W FMS1P50264 508 aa10.06□□□□□ -0.8
CTI6YPL181W UBP10P53874 792 aaPredicted RBP10.06□□□□□ -0.8
CTI6YPL181W DUS4Q06063 367 aa10.06□□□□□ -0.8
CTI6YPL181W VIP1Q06685 1146 aaKnown RBP10.06□□□□□ -0.8
CTI6YPL181W MYO1P08964 1928 aa10.05□□□□□ -0.8
CTI6YPL181W SEC20P28791 383 aa10.05□□□□□ -0.8
CTI6YPL181W RXT2P38255 430 aa10.05□□□□□ -0.8
CTI6YPL181W TPM2P40414 161 aa10.05□□□□□ -0.8
CTI6YPL181W PCI8P40512 444 aa10.05□□□□□ -0.8
CTI6YPL181W ENT3P47160 408 aa10.05□□□□□ -0.8
CTI6YPL181W ASE1P50275 885 aa10.05□□□□□ -0.8
CTI6YPL181W PHR1P05066 565 aaKnown RBP RIP-Chip data10.04□□□□□ -0.8not detected
CTI6YPL181W YHL017WP38745 532 aa10.04□□□□□ -0.8
CTI6YPL181W RPN10P38886 268 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms