RNA–Protein interactions for RNA: YPL181W

CTI6, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene CTI6, Length 1,521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTI6YPL181W MON2P48563 1636 aaPredicted RBP17.08■□□□□ 0.32
CTI6YPL181W INO80P53115 1489 aa17.05■□□□□ 0.32
CTI6YPL181W SGS1P35187 1447 aa16.76■□□□□ 0.27
CTI6YPL181W TCB3Q03640 1545 aaKnown RBP16.64■□□□□ 0.25
CTI6YPL181W TY1B-DR4Q07793 1604 aa16.53■□□□□ 0.24
CTI6YPL181W SWR1Q05471 1514 aa16.46■□□□□ 0.23
CTI6YPL181W DNA2P38859 1522 aa16.27■□□□□ 0.19
CTI6YPL181W KOG1P38873 1557 aa16.08■□□□□ 0.16
CTI6YPL181W HSL1P34244 1518 aa16.08■□□□□ 0.16
CTI6YPL181W SPT6P23615 1451 aaKnown RBP16.04■□□□□ 0.16
CTI6YPL181W SPA2P23201 1466 aaKnown RBP15.9■□□□□ 0.14
CTI6YPL181W HIR3P47171 1648 aa15.76■□□□□ 0.11
CTI6YPL181W SSN2P38931 1420 aa15.67■□□□□ 0.1
CTI6YPL181W XRN1P22147 1528 aaKnown RBP15.55■□□□□ 0.08
CTI6YPL181W ECM5Q03214 1411 aa15.51■□□□□ 0.07
CTI6YPL181W BUD4P47136 1447 aa15.44■□□□□ 0.06
CTI6YPL181W THO2P53552 1597 aaKnown RBP15.44■□□□□ 0.06
CTI6YPL181W RSE1Q04693 1361 aaKnown RBP15.38■□□□□ 0.05
CTI6YPL181W REV3P14284 1504 aa15.27■□□□□ 0.04
CTI6YPL181W MDS3P53094 1487 aa15.23■□□□□ 0.03
CTI6YPL181W DRS1P32892 752 aaKnown RBP15.17■□□□□ 0.02
CTI6YPL181W PEP1P32319 1579 aa15.16■□□□□ 0.02
CTI6YPL181W ATG2P53855 1592 aa15.15■□□□□ 0.02
CTI6YPL181W SIN3P22579 1536 aa15.12■□□□□ 0.01
CTI6YPL181W TAF2P23255 1407 aa15.1■□□□□ 0.01
CTI6YPL181W SSK2P53599 1579 aa15.01□□□□□ -0.01
CTI6YPL181W SKI3P17883 1432 aaKnown RBP14.98□□□□□ -0.01
CTI6YPL181W ESP1Q03018 1630 aa14.92□□□□□ -0.02
CTI6YPL181W MTC1P47018 478 aaKnown RBP14.83□□□□□ -0.04
CTI6YPL181W BPT1P14772 1559 aa14.8□□□□□ -0.04
CTI6YPL181W MYO2P19524 1574 aaKnown RBP14.75□□□□□ -0.05
CTI6YPL181W YPK9Q12697 1472 aa14.74□□□□□ -0.05
CTI6YPL181W UFD4P33202 1483 aa14.68□□□□□ -0.06
CTI6YPL181W SCC2Q04002 1493 aa14.67□□□□□ -0.06
CTI6YPL181W RPO31P04051 1460 aa14.59□□□□□ -0.07
CTI6YPL181W YCF1P39109 1515 aaKnown RBP14.55□□□□□ -0.08
CTI6YPL181W TY2B-LR1P0C2J3 1770 aa14.46□□□□□ -0.1
CTI6YPL181W TY2B-FP0CX63 1770 aa14.46□□□□□ -0.1
CTI6YPL181W TY2B-GR2P0CX64 1770 aa14.46□□□□□ -0.1
CTI6YPL181W TY2B-CP25384 1770 aa14.46□□□□□ -0.1
CTI6YPL181W TY2B-DR2Q03494 1770 aa14.46□□□□□ -0.1
CTI6YPL181W TY1B-DR1Q03855 1755 aa14.46□□□□□ -0.1
CTI6YPL181W TY2B-DR3Q07791 1770 aaKnown RBP14.46□□□□□ -0.1
CTI6YPL181W TY2B-OR1Q12113 1770 aa14.46□□□□□ -0.1
CTI6YPL181W TY2B-DR1Q12472 1770 aa14.46□□□□□ -0.1
CTI6YPL181W TY2B-OR2Q12501 1770 aa14.46□□□□□ -0.1
CTI6YPL181W POL1P13382 1468 aa14.43□□□□□ -0.1
CTI6YPL181W TOP2P06786 1428 aaKnown RBP14.42□□□□□ -0.1
CTI6YPL181W RKR1Q04781 1562 aa14.38□□□□□ -0.11
CTI6YPL181W CHD1P32657 1468 aa14.37□□□□□ -0.11
CTI6YPL181W CDC25P04821 1589 aa14.36□□□□□ -0.11
CTI6YPL181W STU1P38198 1513 aa14.33□□□□□ -0.12
CTI6YPL181W TY1B-BRQ12193 1756 aa14.33□□□□□ -0.12
CTI6YPL181W TY1B-GR3Q12316 1755 aa14.33□□□□□ -0.12
CTI6YPL181W TY1B-ORQ92393 1755 aa14.33□□□□□ -0.12
CTI6YPL181W RQC2Q12532 1038 aaKnown RBP14.32□□□□□ -0.12
CTI6YPL181W TY2B-BQ12491 1770 aa14.29□□□□□ -0.12
CTI6YPL181W TY1B-DR3Q99231 1755 aa14.29□□□□□ -0.12
CTI6YPL181W YOR1P53049 1477 aa14.27□□□□□ -0.12
CTI6YPL181W PAN1P32521 1480 aa14.26□□□□□ -0.13
CTI6YPL181W DNF1P32660 1571 aa14.25□□□□□ -0.13
CTI6YPL181W TY1B-HO13535 1793 aa14.25□□□□□ -0.13
CTI6YPL181W TY1B-DR5P0C2I2 1755 aa14.25□□□□□ -0.13
CTI6YPL181W TY1B-DR6P0C2I3 1755 aa14.25□□□□□ -0.13
CTI6YPL181W TY1B-LR2P0C2I5 1755 aa14.25□□□□□ -0.13
CTI6YPL181W TY1B-LR3P0C2I6 1755 aaKnown RBP14.25□□□□□ -0.13
CTI6YPL181W TY1B-PR1P0C2I9 1755 aaKnown RBP14.25□□□□□ -0.13
CTI6YPL181W TY1B-PR2P0C2J0 1756 aa14.25□□□□□ -0.13
CTI6YPL181W TY1B-PR3P0C2J1 1755 aaKnown RBP14.25□□□□□ -0.13
CTI6YPL181W TY1B-JR1P47098 1755 aa14.25□□□□□ -0.13
CTI6YPL181W TY1B-ML2Q03434 1755 aaKnown RBP14.25□□□□□ -0.13
CTI6YPL181W TY1B-ER1Q03612 1755 aa14.25□□□□□ -0.13
CTI6YPL181W TY1B-ML1Q04711 1755 aaKnown RBP14.25□□□□□ -0.13
CTI6YPL181W TY1B-GR2Q12269 1755 aa14.25□□□□□ -0.13
CTI6YPL181W TY1B-OLQ12273 1755 aa14.25□□□□□ -0.13
CTI6YPL181W TY1B-PLQ12414 1755 aaKnown RBP14.25□□□□□ -0.13
CTI6YPL181W SMC4Q12267 1418 aa14.24□□□□□ -0.13
CTI6YPL181W ESC1Q03661 1658 aaKnown RBP14.22□□□□□ -0.13
CTI6YPL181W MMS22Q06164 1454 aa14.21□□□□□ -0.13
CTI6YPL181W RPA190P10964 1664 aaKnown RBP14.13□□□□□ -0.15
CTI6YPL181W SPP41P38904 1435 aa14.11□□□□□ -0.15
CTI6YPL181W MET5P47169 1442 aa14.11□□□□□ -0.15
CTI6YPL181W YTA7P40340 1379 aa14.08□□□□□ -0.16
CTI6YPL181W TRM732Q03496 1420 aa14.05□□□□□ -0.16
CTI6YPL181W MYO4P32492 1471 aa14.01□□□□□ -0.17
CTI6YPL181W TSC11P40061 1430 aa14.01□□□□□ -0.17
CTI6YPL181W VTH1P40438 1549 aa13.99□□□□□ -0.17
CTI6YPL181W VTH2P40890 1549 aa13.99□□□□□ -0.17
CTI6YPL181W TY1B-JR2P47100 1755 aaKnown RBP13.98□□□□□ -0.17
CTI6YPL181W TY1B-ER2Q03619 1755 aa13.98□□□□□ -0.17
CTI6YPL181W TY1B-MR1Q04214 1755 aa13.98□□□□□ -0.17
CTI6YPL181W TY1B-MR2Q04670 1755 aaKnown RBP13.98□□□□□ -0.17
CTI6YPL181W TY1B-LR1Q12088 1755 aaKnown RBP13.98□□□□□ -0.17
CTI6YPL181W TY1B-NL1Q12112 1755 aa13.98□□□□□ -0.17
CTI6YPL181W TY1B-GR1Q12141 1755 aa13.98□□□□□ -0.17
CTI6YPL181W TY1B-BLQ12490 1755 aa13.98□□□□□ -0.17
CTI6YPL181W NUP159P40477 1460 aa13.9□□□□□ -0.18
CTI6YPL181W NTE1Q04958 1679 aa13.89□□□□□ -0.19
CTI6YPL181W LTE1P07866 1435 aa13.87□□□□□ -0.19
CTI6YPL181W YRF1-1P0CX20 1796 aa13.85□□□□□ -0.19
Retrieved 100 of 5,963 RNA–protein pairs in 74.2 ms