RNA–Protein interactions for RNA: YER119C

AVT6, Transcript of Vacuolar aspartate and glutamate exporter, yeast

Gene AVT6, Length 1,347 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AVT6	YER119C	CSM2	P40465	213 aa		11.85	□□□□□ -0.51
AVT6	YER119C	TRM44	Q02648	567 aa	Known RBP	11.85	□□□□□ -0.51
AVT6	YER119C	SEN54	Q02825	467 aa	Predicted RBP	11.85	□□□□□ -0.51
AVT6	YER119C	GDE1	Q02979	1223 aa		11.85	□□□□□ -0.51
AVT6	YER119C	APC11	Q12157	165 aa		11.85	□□□□□ -0.51
AVT6	YER119C	YOR111W	Q99210	232 aa		11.85	□□□□□ -0.51
AVT6	YER119C	GSC2	P40989	1895 aa		11.84	□□□□□ -0.51
AVT6	YER119C	HSP82	P02829	709 aa	Known RBP	11.84	□□□□□ -0.51
AVT6	YER119C	KIN1	P13185	1064 aa		11.84	□□□□□ -0.51
AVT6	YER119C	FRS2	P15625	503 aa	Known RBP	11.84	□□□□□ -0.51
AVT6	YER119C	HCA4	P20448	770 aa	Known RBP	11.84	□□□□□ -0.51
AVT6	YER119C	SRM1	P21827	482 aa		11.84	□□□□□ -0.51
AVT6	YER119C	KNS1	P32350	737 aa	Predicted RBP	11.84	□□□□□ -0.51
AVT6	YER119C	TIM50	Q02776	476 aa		11.84	□□□□□ -0.51
AVT6	YER119C	RFT1	P38206	574 aa	Predicted RBP	11.83	□□□□□ -0.52
AVT6	YER119C	RXT2	P38255	430 aa		11.83	□□□□□ -0.52
AVT6	YER119C	VPS4	P52917	437 aa		11.83	□□□□□ -0.52
AVT6	YER119C	PIL1	P53252	339 aa	Known RBP	11.83	□□□□□ -0.52
AVT6	YER119C	YGR117C	P53270	476 aa		11.83	□□□□□ -0.52
AVT6	YER119C	DDP1	Q99321	188 aa	Known RBP	11.83	□□□□□ -0.52
AVT6	YER119C	SSA1	P10591	642 aa	Known RBP	11.82	□□□□□ -0.52
AVT6	YER119C	ADP1	P25371	1049 aa		11.82	□□□□□ -0.52
AVT6	YER119C	RPL8B	P29453	256 aa	Known RBP	11.82	□□□□□ -0.52
AVT6	YER119C	DCS2	Q12123	353 aa		11.82	□□□□□ -0.52
AVT6	YER119C	GAP1	P19145	602 aa	Predicted RBP	11.81	□□□□□ -0.52
AVT6	YER119C	YDL124W	Q07551	312 aa	Known RBP	11.81	□□□□□ -0.52
AVT6	YER119C	CEX1	Q12453	761 aa		11.81	□□□□□ -0.52
AVT6	YER119C	CDC6	P09119	513 aa		11.8	□□□□□ -0.52
AVT6	YER119C	SLI15	P38283	698 aa		11.8	□□□□□ -0.52
AVT6	YER119C	TOM71	P38825	639 aa	Known RBP	11.8	□□□□□ -0.52
AVT6	YER119C	PCI8	P40512	444 aa		11.8	□□□□□ -0.52
AVT6	YER119C	FET4	P40988	552 aa		11.8	□□□□□ -0.52
AVT6	YER119C	SNU71	P53207	620 aa	Known RBP	11.8	□□□□□ -0.52
AVT6	YER119C	FOL1	P53848	824 aa		11.8	□□□□□ -0.52
AVT6	YER119C	GET3	Q12154	354 aa	Known RBP	11.8	□□□□□ -0.52
AVT6	YER119C	TUS1	Q06412	1307 aa		11.8	□□□□□ -0.52
AVT6	YER119C	PMA1	P05030	918 aa	Known RBP	11.79	□□□□□ -0.52
AVT6	YER119C	HPR1	P17629	752 aa	Known RBP	11.79	□□□□□ -0.52
AVT6	YER119C	RAD53	P22216	821 aa		11.79	□□□□□ -0.52
AVT6	YER119C	CHS3	P29465	1165 aa		11.79	□□□□□ -0.52
AVT6	YER119C	YBL028C	P38202	106 aa		11.79	□□□□□ -0.52
AVT6	YER119C	CST26	P38226	397 aa		11.79	□□□□□ -0.52
AVT6	YER119C	VPS30	Q02948	557 aa		11.79	□□□□□ -0.52
AVT6	YER119C	YDR341C	Q05506	607 aa	Known RBP	11.79	□□□□□ -0.52
AVT6	YER119C	DSE3	Q08729	430 aa		11.79	□□□□□ -0.52
AVT6	YER119C	YLR278C	Q05854	1341 aa		11.79	□□□□□ -0.52
AVT6	YER119C	MET6	P05694	767 aa	Known RBP	11.78	□□□□□ -0.52
AVT6	YER119C	NUC1	P08466	329 aa		11.78	□□□□□ -0.52
AVT6	YER119C	SRP54	P20424	541 aa	Known RBP	11.78	□□□□□ -0.52
AVT6	YER119C	DID4	P36108	232 aa		11.78	□□□□□ -0.52
AVT6	YER119C	YGL138C	P53122	345 aa		11.78	□□□□□ -0.52
AVT6	YER119C	VPS1	P21576	704 aa	Known RBP	11.77	□□□□□ -0.53
AVT6	YER119C	RTG2	P32608	588 aa	Known RBP	11.77	□□□□□ -0.53
AVT6	YER119C	RKM3	P38222	552 aa		11.77	□□□□□ -0.53
AVT6	YER119C	NIT1	P40447	199 aa		11.77	□□□□□ -0.53
AVT6	YER119C	YPT11	P48559	417 aa		11.77	□□□□□ -0.53
AVT6	YER119C	NAF1	P53919	492 aa	Known RBP	11.77	□□□□□ -0.53
AVT6	YER119C	MDM1	Q01846	1127 aa		11.77	□□□□□ -0.53
AVT6	YER119C	HXK1	P04806	485 aa	Known RBP	11.76	□□□□□ -0.53
AVT6	YER119C	CBP1	P07252	654 aa		11.76	□□□□□ -0.53
AVT6	YER119C	ACE2	P21192	770 aa		11.76	□□□□□ -0.53
AVT6	YER119C	KEL1	P38853	1164 aa	Known RBP	11.76	□□□□□ -0.53
AVT6	YER119C	EMP47	P43555	445 aa		11.76	□□□□□ -0.53
AVT6	YER119C	RSC1	P53236	928 aa		11.76	□□□□□ -0.53
AVT6	YER119C	LCD1	Q04377	747 aa		11.76	□□□□□ -0.53
AVT6	YER119C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	11.76	□□□□□ -0.53	RIP-Chip
AVT6	YER119C	CIT1	P00890	479 aa		11.75	□□□□□ -0.53
AVT6	YER119C	RPL22A	P05749	121 aa	Known RBP	11.75	□□□□□ -0.53
AVT6	YER119C	MCM3	P24279	971 aa	Known RBP	11.75	□□□□□ -0.53
AVT6	YER119C	SPB4	P25808	606 aa	Predicted RBP	11.75	□□□□□ -0.53
AVT6	YER119C	TUB2	P02557	457 aa	Known RBP	11.74	□□□□□ -0.53
AVT6	YER119C	TAF13	P11747	167 aa		11.74	□□□□□ -0.53
AVT6	YER119C	RGP1	P16664	663 aa		11.74	□□□□□ -0.53
AVT6	YER119C	URA1	P28272	314 aa	Predicted RBP	11.74	□□□□□ -0.53
AVT6	YER119C	SEC20	P28791	383 aa		11.74	□□□□□ -0.53
AVT6	YER119C	YKT6	P36015	200 aa	Known RBP	11.74	□□□□□ -0.53
AVT6	YER119C	NPR3	P38742	1146 aa		11.74	□□□□□ -0.53
AVT6	YER119C	CCT3	P39077	534 aa	Known RBP	11.74	□□□□□ -0.53
AVT6	YER119C	CUE3	P53137	624 aa	Known RBP	11.74	□□□□□ -0.53
AVT6	YER119C	AIM7	Q12156	149 aa		11.74	□□□□□ -0.53
AVT6	YER119C	THS1	P04801	734 aa	Known RBP	11.73	□□□□□ -0.53
AVT6	YER119C	GPA1	P08539	472 aa		11.73	□□□□□ -0.53
AVT6	YER119C	VPS45	P38932	577 aa		11.73	□□□□□ -0.53
AVT6	YER119C	NBL1	Q3E7Y6	73 aa		11.73	□□□□□ -0.53
AVT6	YER119C	STI1	P15705	589 aa	Known RBP RIP-Chip data	11.72	□□□□□ -0.53	not detected
AVT6	YER119C	MAK11	P20484	414 aa	Known RBP	11.72	□□□□□ -0.53
AVT6	YER119C	TIF4631	P39935	952 aa	Known RBP	11.72	□□□□□ -0.53
AVT6	YER119C	YER130C	P39959	443 aa		11.72	□□□□□ -0.53
AVT6	YER119C	UBP9	P39967	754 aa		11.72	□□□□□ -0.53
AVT6	YER119C	YPR148C	Q06523	435 aa		11.72	□□□□□ -0.53
AVT6	YER119C	CSC1	Q06538	782 aa		11.72	□□□□□ -0.53
AVT6	YER119C	LAP2	Q10740	671 aa		11.72	□□□□□ -0.53
AVT6	YER119C	TIP41	Q12199	356 aa		11.72	□□□□□ -0.53
AVT6	YER119C	TRS33	Q99394	268 aa		11.72	□□□□□ -0.53
AVT6	YER119C	MYO1	P08964	1928 aa		11.71	□□□□□ -0.53
AVT6	YER119C	GAL2	P13181	574 aa		11.71	□□□□□ -0.53
AVT6	YER119C	ALG1	P16661	449 aa		11.71	□□□□□ -0.53
AVT6	YER119C	MCM4	P30665	933 aa	Known RBP	11.71	□□□□□ -0.53
AVT6	YER119C	TPS3	P38426	1054 aa	Known RBP	11.71	□□□□□ -0.53
AVT6	YER119C	RET3	P53600	189 aa		11.71	□□□□□ -0.53

Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms