Protein–RNA interactions for Protein: Q02648

TRM44, tRNA (uracil-O(2)-)-methyltransferase, yeastyeast

Known RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRM44Q02648 YML009W-BYML009W-B 477 nt24.42■■□□□ 1.5
TRM44Q02648 NOP1YDL014W 984 nt23.99■■□□□ 1.43
TRM44Q02648 NSR1YGR159C 1245 nt23.77■■□□□ 1.4
TRM44Q02648 YKL036CYKL036C 393 nt22.72■■□□□ 1.23
TRM44Q02648 YJL027CYJL027C 417 nt21.31■■□□□ 1
TRM44Q02648 Q0297Q0297 156 nt21.24■□□□□ 0.99
TRM44Q02648 SCS3YGL126W 1143 nt21■□□□□ 0.95
TRM44Q02648 SRX1YKL086W 384 nt20.99■□□□□ 0.95
TRM44Q02648 MDJ1YFL016C 1536 nt20.53■□□□□ 0.88
TRM44Q02648 YCR051WYCR051W 669 nt19.93■□□□□ 0.78
TRM44Q02648 YOL085CYOL085C 342 nt19.68■□□□□ 0.74
TRM44Q02648 SCJ1YMR214W 1134 nt19.38■□□□□ 0.69
TRM44Q02648 PKP1YIL042C 1185 nt19.28■□□□□ 0.68
TRM44Q02648 RPP1BYDL130W 321 nt19.04■□□□□ 0.64
TRM44Q02648 ATS1YAL020C 1002 nt18.95■□□□□ 0.62
TRM44Q02648 TRN1tP(UGG)A 72 nt18.64■□□□□ 0.57
TRM44Q02648 SUF9tP(UGG)F 72 nt18.64■□□□□ 0.57
TRM44Q02648 SUF8tP(UGG)H 72 nt18.64■□□□□ 0.57
TRM44Q02648 tP(UGG)LtP(UGG)L 72 nt18.64■□□□□ 0.57
TRM44Q02648 SUF7tP(UGG)M 72 nt18.64■□□□□ 0.57
TRM44Q02648 tP(UGG)N1tP(UGG)N1 72 nt18.64■□□□□ 0.57
TRM44Q02648 tP(UGG)N2tP(UGG)N2 72 nt18.64■□□□□ 0.57
TRM44Q02648 tP(UGG)O1tP(UGG)O1 72 nt18.64■□□□□ 0.57
TRM44Q02648 SUF11tP(UGG)O2 72 nt18.64■□□□□ 0.57
TRM44Q02648 DBP2YNL112W 1641 nt18.44■□□□□ 0.54
TRM44Q02648 CCC1YLR220W 969 nt18.4■□□□□ 0.54
TRM44Q02648 PET122YER153C 765 nt18.13■□□□□ 0.49
TRM44Q02648 SCR1SCR1 522 nt18.07■□□□□ 0.48
TRM44Q02648 tP(UGG)O3tP(UGG)O3 72 nt17.81■□□□□ 0.44
TRM44Q02648 RRN5YLR141W 1092 nt17.66■□□□□ 0.42
TRM44Q02648 RTC3YHR087W 336 nt17.59■□□□□ 0.41
TRM44Q02648 PST2YDR032C 597 nt17.47■□□□□ 0.39
TRM44Q02648 RSB1YOR049C 1065 nt17.46■□□□□ 0.39
TRM44Q02648 RVS167YDR388W 1449 nt17.42■□□□□ 0.38
TRM44Q02648 YBR190WYBR190W 312 nt17.35■□□□□ 0.37
TRM44Q02648 YER088W-BYER088W-B 147 nt17.33■□□□□ 0.36
TRM44Q02648 YDJ1YNL064C 1230 nt17.25■□□□□ 0.35
TRM44Q02648 YKL097CYKL097C 411 nt17.07■□□□□ 0.32
TRM44Q02648 SHR5YOL110W 714 nt16.99■□□□□ 0.31
TRM44Q02648 GAR1YHR089C 618 nt16.74■□□□□ 0.27
TRM44Q02648 SHU1YHL006C 453 nt16.61■□□□□ 0.25
TRM44Q02648 YOR139CYOR139C 393 nt16.31■□□□□ 0.2
TRM44Q02648 DEP1YAL013W 1218 nt16.28■□□□□ 0.2
TRM44Q02648 TIR1YER011W 765 nt16.15■□□□□ 0.18
TRM44Q02648 YAL037C-BYAL037C-B 975 nt16.13■□□□□ 0.17
TRM44Q02648 URN1YPR152C 1398 nt16.13■□□□□ 0.17
TRM44Q02648 YNL208WYNL208W 600 nt16.11■□□□□ 0.17
TRM44Q02648 RPN10YHR200W 807 nt16.02■□□□□ 0.16
TRM44Q02648 NPL3YDR432W 1245 nt15.98■□□□□ 0.15
TRM44Q02648 SSA1YAL005C 1929 nt15.85■□□□□ 0.13
TRM44Q02648 OPI9YLR338W 858 nt15.79■□□□□ 0.12
TRM44Q02648 SRB2YHR041C 633 nt15.74■□□□□ 0.11
TRM44Q02648 YGR021WYGR021W 873 nt15.65■□□□□ 0.1
TRM44Q02648 HOM6YJR139C 1080 nt15.65■□□□□ 0.1
TRM44Q02648 MNP1YGL068W 585 nt15.64■□□□□ 0.09
TRM44Q02648 YOL037CYOL037C 354 nt15.63■□□□□ 0.09
TRM44Q02648 tM(CAU)CtM(CAU)C 72 nt15.62■□□□□ 0.09
TRM44Q02648 IMT4tM(CAU)E 72 nt15.62■□□□□ 0.09
TRM44Q02648 IMT3tM(CAU)J3 72 nt15.62■□□□□ 0.09
TRM44Q02648 IMT1tM(CAU)O1 72 nt15.62■□□□□ 0.09
TRM44Q02648 IMT2tM(CAU)P 72 nt15.62■□□□□ 0.09
TRM44Q02648 WWM1YFL010C 636 nt15.55■□□□□ 0.08
TRM44Q02648 SAH1YER043C 1350 nt15.52■□□□□ 0.08
TRM44Q02648 YJR018WYJR018W 363 nt15.43■□□□□ 0.06
TRM44Q02648 RKM5YLR137W 1104 nt15.4■□□□□ 0.06
TRM44Q02648 YJR120WYJR120W 351 nt15.38■□□□□ 0.05
TRM44Q02648 PUN1YLR414C 792 nt15.33■□□□□ 0.04
TRM44Q02648 YFL021C-AYFL021C-A 855 nt15.3■□□□□ 0.04
TRM44Q02648 PUT4YOR348C 1884 nt15.3■□□□□ 0.04
TRM44Q02648 RPP2BYDR382W 333 nt15.26■□□□□ 0.03
TRM44Q02648 PUS2YGL063W 1113 nt15.25■□□□□ 0.03
TRM44Q02648 MOT3YMR070W 1473 nt15.25■□□□□ 0.03
TRM44Q02648 YLR281CYLR281C 468 nt15.23■□□□□ 0.03
TRM44Q02648 SSA3YBL075C 1950 nt15.23■□□□□ 0.03
TRM44Q02648 ARE1YCR048W 1833 nt15.21■□□□□ 0.03
TRM44Q02648 BDH2YAL061W 1254 nt15.09■□□□□ 0.01
TRM44Q02648 WHI5YOR083W 888 nt15.08■□□□□ 0
TRM44Q02648 BSC6YOL137W 1494 nt15.07■□□□□ 0
TRM44Q02648 PTC2YER089C 1395 nt15.02■□□□□ -0
TRM44Q02648 LSM3YLR438C-A 270 nt15.01□□□□□ -0.01
TRM44Q02648 YHR049C-AYHR049C-A 297 nt14.99□□□□□ -0.01
TRM44Q02648 MRPL8YJL063C 717 nt14.88□□□□□ -0.03
TRM44Q02648 FMP45YDL222C 930 nt14.87□□□□□ -0.03
TRM44Q02648 YPR011CYPR011C 981 nt14.87□□□□□ -0.03
TRM44Q02648 POA1YBR022W 534 nt14.85□□□□□ -0.03
TRM44Q02648 DSK2YMR276W 1122 nt14.82□□□□□ -0.04
TRM44Q02648 INM2YDR287W 879 nt14.8□□□□□ -0.04
TRM44Q02648 YLR236CYLR236C 324 nt14.79□□□□□ -0.04
TRM44Q02648 YCH1YGR203W 447 nt14.77□□□□□ -0.05
TRM44Q02648 YBL100CYBL100C 315 nt14.75□□□□□ -0.05
TRM44Q02648 IMP2'YIL154C 1041 nt14.74□□□□□ -0.05
TRM44Q02648 NAB2YGL122C 1578 nt14.73□□□□□ -0.05
TRM44Q02648 TRM9YML014W 840 nt14.68□□□□□ -0.06
TRM44Q02648 DAL1YIR027C 1383 nt14.68□□□□□ -0.06
TRM44Q02648 BUD23YCR047C 828 nt14.67□□□□□ -0.06
TRM44Q02648 FIS1YIL065C 468 nt14.63□□□□□ -0.07
TRM44Q02648 YLR154C-GYLR154C-G 150 nt14.63□□□□□ -0.07
TRM44Q02648 FPR4YLR449W 1179 nt14.62□□□□□ -0.07
TRM44Q02648 FUN26YAL022C 1554 nt14.61□□□□□ -0.07
TRM44Q02648 ADO1YJR105W 1023 nt14.61□□□□□ -0.07
Retrieved 100 of 7,029 protein–RNA pairs in 9.7 ms